FFCP PHASE1:Hg19::chr13:75890730..75890751,-: Difference between revisions
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|ontology_enrichment_celltype_v019=CL:0000898;1.33e-26;3!CL:0000624;2.87e-23;6!CL:0000815;1.78e-18;2!CL:0000792;1.78e-18;2!CL:0002677;1.78e-18;2!CL:0000791;7.15e-12;18!CL:0000789;7.15e-12;18!CL:0002419;7.15e-12;18!CL:0000895;6.61e-10;1!CL:0000084;1.66e-08;25 | |ontology_enrichment_celltype_v019=CL:0000898;1.33e-26;3!CL:0000624;2.87e-23;6!CL:0000815;1.78e-18;2!CL:0000792;1.78e-18;2!CL:0002677;1.78e-18;2!CL:0000791;7.15e-12;18!CL:0000789;7.15e-12;18!CL:0002419;7.15e-12;18!CL:0000895;6.61e-10;1!CL:0000084;1.66e-08;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000898,8.61e-27,3;CL:0000624,1.97e-23,6;CL:0000815,1.00e-18,2;CL:0000792,1.00e-18,2;CL:0002677,1.00e-18,2;CL:0000791,5.41e-12,18;CL:0000789,5.41e-12,18;CL:0002420,5.41e-12,18;CL:0002419,5.41e-12,18;CL:0000790,5.41e-12,18;CL:0000810,7.55e-10,1;CL:0000895,7.55e-10,1;CL:0002436,7.55e-10,1;CL:0002427,7.55e-10,1;CL:0002428,7.55e-10,1;CL:0002429,7.55e-10,1;CL:0002433,7.55e-10,1;CL:0002431,7.55e-10,1;CL:0002432,7.55e-10,1;CL:0000084,1.37e-08,25;CL:0000827,1.37e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000790;7.15e-12;18!CL:0002427;6.61e-10;1!UBERON:0001045;6.61e-10;1 | |ontology_enrichment_development_v019=CL:0000790;7.15e-12;18!CL:0002427;6.61e-10;1!UBERON:0001045;6.61e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4960;2.97e-10;1!DOID:0070004;2.97e-10;1 | |ontology_enrichment_disease_v019=DOID:4960;2.97e-10;1!DOID:0070004;2.97e-10;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,2.84e-10,1;DOID:0070004,2.84e-10,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002372;6.61e-10;1!UBERON:0001154;6.61e-10;1!UBERON:0001153;6.61e-10;1!UBERON:0009854;6.61e-10;1!UBERON:0001961;6.61e-10;1!UBERON:0001744;6.61e-10;1!UBERON:0001042;6.61e-10;1!UBERON:0001735;6.61e-10;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;6.61e-10;1!UBERON:0001154;6.61e-10;1!UBERON:0001153;6.61e-10;1!UBERON:0009854;6.61e-10;1!UBERON:0001961;6.61e-10;1!UBERON:0001744;6.61e-10;1!UBERON:0001042;6.61e-10;1!UBERON:0001735;6.61e-10;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,5.30e-10,1;UBERON:0001153,5.30e-10,1;UBERON:0001045,5.30e-10,1;UBERON:0002372,6.91e-10,1;UBERON:0001961,6.91e-10,1;UBERON:0001744,6.91e-10,1;UBERON:0001735,6.91e-10,1 | |||
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|short_description=p11@TBC1D4 | |short_description=p11@TBC1D4 | ||
}} | }} |
Revision as of 04:36, 20 November 2012
Short description: | p11@TBC1D4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_TBC1D4_5end |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | 0bp_to_uc010tht.1, uc010thu.1_5end |
EntrezGene: | TBC1D4 |
HGNC: | 19165 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 8.61e-27 | 3 |
CD4-positive, alpha-beta T cell | 1.97e-23 | 6 |
regulatory T cell | 1.00e-18 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.00e-18 | 2 |
naive regulatory T cell | 1.00e-18 | 2 |
mature alpha-beta T cell | 5.41e-12 | 18 |
alpha-beta T cell | 5.41e-12 | 18 |
immature T cell | 5.41e-12 | 18 |
mature T cell | 5.41e-12 | 18 |
immature alpha-beta T cell | 5.41e-12 | 18 |
CD4-positive, alpha-beta thymocyte | 7.55e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 7.55e-10 | 1 |
mature CD4 single-positive thymocyte | 7.55e-10 | 1 |
resting double-positive thymocyte | 7.55e-10 | 1 |
double-positive blast | 7.55e-10 | 1 |
CD69-positive double-positive thymocyte | 7.55e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 7.55e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 7.55e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 7.55e-10 | 1 |
T cell | 1.37e-08 | 25 |
pro-T cell | 1.37e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 5.30e-10 | 1 |
caecum | 5.30e-10 | 1 |
midgut | 5.30e-10 | 1 |
tonsil | 6.91e-10 | 1 |
mucosa-associated lymphoid tissue | 6.91e-10 | 1 |
lymphoid tissue | 6.91e-10 | 1 |
tonsillar ring | 6.91e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.84e-10 | 1 |
myeloma | 2.84e-10 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.