FFCP PHASE1:Hg19::chr10:74856613..74856631,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!5.54e-14!180;CL:0000048!6.91e-11!430;CL:0000723!5.30e-10!436;CL:0000034!1.17e-09!444;CL:0000359!1.90e-09!32;CL:0000057!5.39e-09!75;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000192!1.78e-08!42;CL:0000514!1.78e-08!42;CL:0000187!1.26e-07!54;CL:0002620!7.26e-07!23 | |ontology_enrichment_celltype=CL:0000055!5.54e-14!180;CL:0000048!6.91e-11!430;CL:0000723!5.30e-10!436;CL:0000034!1.17e-09!444;CL:0000359!1.90e-09!32;CL:0000057!5.39e-09!75;CL:0000680!1.66e-08!57;CL:0000056!1.66e-08!57;CL:0000355!1.66e-08!57;CL:0000192!1.78e-08!42;CL:0000514!1.78e-08!42;CL:0000187!1.26e-07!54;CL:0002620!7.26e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000359;8.08e-09;32!CL:0002620;7.15e-07;23 | |ontology_enrichment_celltype_v019=CL:0000359;8.08e-09;32!CL:0002620;7.15e-07;23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.31e-11,427;CL:0000723,1.09e-10,433;CL:0000034,2.49e-10,441;CL:0000359,1.90e-09,32;CL:0000057,1.92e-09,76;CL:0000680,2.73e-08,58;CL:0000056,2.73e-08,58;CL:0000355,2.73e-08,58;CL:0000192,3.34e-08,43;CL:0000514,3.34e-08,43;CL:0000187,2.02e-07,55;CL:0002620,7.26e-07,23 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2394!1.87e-07!14 | |ontology_enrichment_disease=DOID:2394!1.87e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.89e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;1.89e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.87e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.12e-09!61;UBERON:0002036!2.12e-09!61;UBERON:0003082!2.12e-09!61;UBERON:0000914!3.38e-09!83;UBERON:0002329!3.38e-09!83;UBERON:0003077!3.38e-09!83;UBERON:0003059!3.38e-09!83;UBERON:0007282!3.38e-09!83;UBERON:0009618!3.38e-09!83;UBERON:0007285!3.38e-09!83;UBERON:0004290!4.54e-09!70;UBERON:0002385!7.50e-09!63;UBERON:0001015!7.50e-09!63;UBERON:0000383!7.50e-09!63;UBERON:0000486!4.95e-08!82;UBERON:0001637!2.35e-07!42;UBERON:0003509!2.35e-07!42;UBERON:0004572!2.35e-07!42;UBERON:0004573!5.21e-07!33;UBERON:0004571!5.21e-07!33;UBERON:0004872!6.68e-07!84;UBERON:0002204!9.45e-07!167 | |ontology_enrichment_uberon=UBERON:0001134!2.12e-09!61;UBERON:0002036!2.12e-09!61;UBERON:0003082!2.12e-09!61;UBERON:0000914!3.38e-09!83;UBERON:0002329!3.38e-09!83;UBERON:0003077!3.38e-09!83;UBERON:0003059!3.38e-09!83;UBERON:0007282!3.38e-09!83;UBERON:0009618!3.38e-09!83;UBERON:0007285!3.38e-09!83;UBERON:0004290!4.54e-09!70;UBERON:0002385!7.50e-09!63;UBERON:0001015!7.50e-09!63;UBERON:0000383!7.50e-09!63;UBERON:0000486!4.95e-08!82;UBERON:0001637!2.35e-07!42;UBERON:0003509!2.35e-07!42;UBERON:0004572!2.35e-07!42;UBERON:0004573!5.21e-07!33;UBERON:0004571!5.21e-07!33;UBERON:0004872!6.68e-07!84;UBERON:0002204!9.45e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.56e-09,62;UBERON:0002036,3.56e-09,62;UBERON:0003082,3.56e-09,62;UBERON:0007524,6.63e-09,73;UBERON:0002329,7.14e-09,71;UBERON:0003059,7.14e-09,71;UBERON:0007282,7.14e-09,71;UBERON:0004290,7.14e-09,71;UBERON:0009618,7.14e-09,71;UBERON:0002385,1.21e-08,64;UBERON:0001015,1.21e-08,64;UBERON:0000383,1.21e-08,64;UBERON:0003077,1.75e-08,72;UBERON:0007285,1.75e-08,72;UBERON:0000926,6.36e-08,315;UBERON:0004120,6.36e-08,315;UBERON:0006603,6.36e-08,315;UBERON:0000486,7.11e-08,83;UBERON:0001637,2.35e-07,42;UBERON:0003509,2.35e-07,42;UBERON:0004572,2.35e-07,42;UBERON:0002204,3.08e-07,167;UBERON:0005256,5.07e-07,122;UBERON:0004573,5.21e-07,33;UBERON:0004571,5.21e-07,33;UBERON:0002384,5.68e-07,371 | |||
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| ||
|short_description=p1@P4HA1 | |short_description=p1@P4HA1 | ||
}} | }} |
Revision as of 02:13, 20 November 2012
Short description: | p1@P4HA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_P4HA1_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | -5bp_to_ENST00000307116, ENST00000373008_5end |
EntrezGene: | P4HA1 |
HGNC: | 8546 |
UniProt: | P13674 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.31e-11 | 427 |
somatic stem cell | 1.09e-10 | 433 |
stem cell | 2.49e-10 | 441 |
vascular associated smooth muscle cell | 1.90e-09 | 32 |
fibroblast | 1.92e-09 | 76 |
muscle precursor cell | 2.73e-08 | 58 |
myoblast | 2.73e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.73e-08 | 58 |
smooth muscle cell | 3.34e-08 | 43 |
smooth muscle myoblast | 3.34e-08 | 43 |
muscle cell | 2.02e-07 | 55 |
skin fibroblast | 7.26e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.56e-09 | 62 |
striated muscle tissue | 3.56e-09 | 62 |
myotome | 3.56e-09 | 62 |
dense mesenchyme tissue | 6.63e-09 | 73 |
somite | 7.14e-09 | 71 |
presomitic mesoderm | 7.14e-09 | 71 |
presumptive segmental plate | 7.14e-09 | 71 |
dermomyotome | 7.14e-09 | 71 |
trunk paraxial mesoderm | 7.14e-09 | 71 |
muscle tissue | 1.21e-08 | 64 |
musculature | 1.21e-08 | 64 |
musculature of body | 1.21e-08 | 64 |
paraxial mesoderm | 1.75e-08 | 72 |
presumptive paraxial mesoderm | 1.75e-08 | 72 |
mesoderm | 6.36e-08 | 315 |
mesoderm-derived structure | 6.36e-08 | 315 |
presumptive mesoderm | 6.36e-08 | 315 |
multilaminar epithelium | 7.11e-08 | 83 |
artery | 2.35e-07 | 42 |
arterial blood vessel | 2.35e-07 | 42 |
arterial system | 2.35e-07 | 42 |
musculoskeletal system | 3.08e-07 | 167 |
trunk mesenchyme | 5.07e-07 | 122 |
systemic artery | 5.21e-07 | 33 |
systemic arterial system | 5.21e-07 | 33 |
connective tissue | 5.68e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.87e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.