FFCP PHASE1:Hg19::chr14:55604936..55604962,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000839!2.90e-21!70;CL:0000557!3.39e-19!71;CL:0002194!5.21e-18!63;CL:0000576!5.21e-18!63;CL:0000040!5.21e-18!63;CL:0000559!5.21e-18!63;CL:0002009!2.45e-17!65;CL:0000766!2.40e-16!76;CL:0002057!5.12e-15!42;CL:0000860!6.95e-15!45 | |ontology_enrichment_celltype=CL:0000839!2.90e-21!70;CL:0000557!3.39e-19!71;CL:0002194!5.21e-18!63;CL:0000576!5.21e-18!63;CL:0000040!5.21e-18!63;CL:0000559!5.21e-18!63;CL:0002009!2.45e-17!65;CL:0000766!2.40e-16!76;CL:0002057!5.12e-15!42;CL:0000860!6.95e-15!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.66e-32;33!CL:0002057;5.66e-32;33!CL:0000473;1.62e-31;39!CL:0000234;1.62e-31;39!CL:0000576;4.69e-18;48!CL:0000766;3.50e-13;69!CL:0000235;5.16e-08;6!CL:0000148;1.94e-07;10 | |ontology_enrichment_celltype_v019=CL:0000860;5.66e-32;33!CL:0002057;5.66e-32;33!CL:0000473;1.62e-31;39!CL:0000234;1.62e-31;39!CL:0000576;4.69e-18;48!CL:0000766;3.50e-13;69!CL:0000235;5.16e-08;6!CL:0000148;1.94e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000839,2.49e-36,66;CL:0000557,1.37e-35,67;CL:0002194,6.68e-35,59;CL:0000576,6.68e-35,59;CL:0000040,6.68e-35,59;CL:0000559,6.68e-35,59;CL:0000473,1.67e-34,48;CL:0000234,1.67e-34,48;CL:0002009,2.33e-33,61;CL:0000766,3.33e-32,72;CL:0000860,4.65e-28,42;CL:0002057,4.65e-28,42;CL:0000763,3.22e-17,108;CL:0000049,3.22e-17,108;CL:0002031,2.73e-14,120;CL:0002087,2.75e-12,115;CL:0000738,2.99e-11,136;CL:0000219,2.18e-09,386;CL:0000134,1.86e-08,354;CL:0002320,1.98e-08,361;CL:0000235,4.08e-08,6;CL:0002032,7.78e-08,161;CL:0000837,7.78e-08,161;CL:0000148,1.49e-07,10;CL:0000541,1.49e-07,10;CL:0000048,2.05e-07,427;CL:0000037,4.33e-07,168;CL:0000723,4.78e-07,433;CL:0000988,9.20e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.01e-21;42 | |ontology_enrichment_development_v019=CL:0002057;8.01e-21;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.23e-18!80;UBERON:0001474!2.13e-16!86;UBERON:0004765!5.52e-16!101;UBERON:0001434!5.52e-16!101;UBERON:0002204!6.03e-14!167;UBERON:0002390!2.81e-13!102;UBERON:0003061!2.81e-13!102;UBERON:0002193!3.13e-13!112;UBERON:0000926!4.31e-12!448;UBERON:0004120!4.31e-12!448;UBERON:0006603!4.31e-12!448;UBERON:0002405!1.00e-09!115;UBERON:0000468!8.14e-08!659;UBERON:0003081!1.10e-07!216;UBERON:0000480!7.66e-07!626;UBERON:0000467!8.94e-07!625 | |ontology_enrichment_uberon=UBERON:0002371!3.23e-18!80;UBERON:0001474!2.13e-16!86;UBERON:0004765!5.52e-16!101;UBERON:0001434!5.52e-16!101;UBERON:0002204!6.03e-14!167;UBERON:0002390!2.81e-13!102;UBERON:0003061!2.81e-13!102;UBERON:0002193!3.13e-13!112;UBERON:0000926!4.31e-12!448;UBERON:0004120!4.31e-12!448;UBERON:0006603!4.31e-12!448;UBERON:0002405!1.00e-09!115;UBERON:0000468!8.14e-08!659;UBERON:0003081!1.10e-07!216;UBERON:0000480!7.66e-07!626;UBERON:0000467!8.94e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.68e-07;10!UBERON:0000158;6.68e-07;10 | |ontology_enrichment_uberon_v019=UBERON:0005631;6.68e-07;10!UBERON:0000158;6.68e-07;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.06e-33,76;UBERON:0001474,2.70e-31,82;UBERON:0004765,8.18e-29,90;UBERON:0001434,8.96e-29,100;UBERON:0002405,7.73e-26,93;UBERON:0002390,7.83e-24,98;UBERON:0003061,7.83e-24,98;UBERON:0002193,1.64e-21,108;UBERON:0002204,1.44e-19,167;UBERON:0000926,1.77e-16,315;UBERON:0004120,1.77e-16,315;UBERON:0006603,1.77e-16,315;UBERON:0003081,1.99e-16,203;UBERON:0002384,1.02e-07,371;UBERON:0000923,5.76e-07,560;UBERON:0010316,5.76e-07,560;UBERON:0005291,5.76e-07,560;UBERON:0006598,5.76e-07,560;UBERON:0010317,5.76e-07,560;UBERON:0002532,5.76e-07,560;UBERON:0002050,9.48e-07,564 | |||
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| ||
|short_description=p8@LGALS3 | |short_description=p8@LGALS3 | ||
}} | }} |
Revision as of 00:13, 20 November 2012
Short description: | p8@LGALS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_LGALS3_5end |
Coexpression cluster: | C1200_Monocytederived_Melanocyte_CD14_large_amniotic_Mast_melanoma |
Association with transcript: | 174bp_to_ENST00000556263_5end |
EntrezGene: | LGALS3 |
HGNC: | 6563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 2.49e-36 | 66 |
granulocyte monocyte progenitor cell | 1.37e-35 | 67 |
monopoietic cell | 6.68e-35 | 59 |
monocyte | 6.68e-35 | 59 |
monoblast | 6.68e-35 | 59 |
promonocyte | 6.68e-35 | 59 |
defensive cell | 1.67e-34 | 48 |
phagocyte | 1.67e-34 | 48 |
macrophage dendritic cell progenitor | 2.33e-33 | 61 |
myeloid leukocyte | 3.33e-32 | 72 |
classical monocyte | 4.65e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.65e-28 | 42 |
myeloid cell | 3.22e-17 | 108 |
common myeloid progenitor | 3.22e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 2.73e-14 | 120 |
nongranular leukocyte | 2.75e-12 | 115 |
leukocyte | 2.99e-11 | 136 |
motile cell | 2.18e-09 | 386 |
mesenchymal cell | 1.86e-08 | 354 |
connective tissue cell | 1.98e-08 | 361 |
macrophage | 4.08e-08 | 6 |
hematopoietic oligopotent progenitor cell | 7.78e-08 | 161 |
hematopoietic multipotent progenitor cell | 7.78e-08 | 161 |
melanocyte | 1.49e-07 | 10 |
melanoblast | 1.49e-07 | 10 |
multi fate stem cell | 2.05e-07 | 427 |
hematopoietic stem cell | 4.33e-07 | 168 |
somatic stem cell | 4.78e-07 | 433 |
hematopoietic cell | 9.20e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.06e-33 | 76 |
bone element | 2.70e-31 | 82 |
skeletal element | 8.18e-29 | 90 |
skeletal system | 8.96e-29 | 100 |
immune system | 7.73e-26 | 93 |
hematopoietic system | 7.83e-24 | 98 |
blood island | 7.83e-24 | 98 |
hemolymphoid system | 1.64e-21 | 108 |
musculoskeletal system | 1.44e-19 | 167 |
mesoderm | 1.77e-16 | 315 |
mesoderm-derived structure | 1.77e-16 | 315 |
presumptive mesoderm | 1.77e-16 | 315 |
lateral plate mesoderm | 1.99e-16 | 203 |
connective tissue | 1.02e-07 | 371 |
germ layer | 5.76e-07 | 560 |
germ layer / neural crest | 5.76e-07 | 560 |
embryonic tissue | 5.76e-07 | 560 |
presumptive structure | 5.76e-07 | 560 |
germ layer / neural crest derived structure | 5.76e-07 | 560 |
epiblast (generic) | 5.76e-07 | 560 |
embryonic structure | 9.48e-07 | 564 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.