FFCP PHASE1:Hg19::chr11:121323000..121323046,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!3.18e-15!140;CL:0000838!4.81e-14!52;CL:0002087!8.72e-14!119;CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000037!3.95e-11!172;CL:0000566!3.95e-11!172;CL:0002031!9.34e-11!124;CL:0000791!2.66e-10!18;CL:0000789!2.66e-10!18;CL:0002420!2.66e-10!18;CL:0002419!2.66e-10!18;CL:0000790!2.66e-10!18;CL:0002032!8.53e-10!165;CL:0000837!8.53e-10!165;CL:0000988!1.46e-08!182;CL:0000625!7.32e-08!11;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25 | |ontology_enrichment_celltype=CL:0000738!3.18e-15!140;CL:0000838!4.81e-14!52;CL:0002087!8.72e-14!119;CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000037!3.95e-11!172;CL:0000566!3.95e-11!172;CL:0002031!9.34e-11!124;CL:0000791!2.66e-10!18;CL:0000789!2.66e-10!18;CL:0002420!2.66e-10!18;CL:0002419!2.66e-10!18;CL:0000790!2.66e-10!18;CL:0002032!8.53e-10!165;CL:0000837!8.53e-10!165;CL:0000988!1.46e-08!182;CL:0000625!7.32e-08!11;CL:0000084!1.19e-07!25;CL:0000827!1.19e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.37e-10;18!CL:0000789;1.37e-10;18!CL:0002419;1.37e-10;18!CL:0000542;1.72e-08;53!CL:0000084;4.39e-08;25!CL:0000625;4.41e-08;11 | |ontology_enrichment_celltype_v019=CL:0000791;1.37e-10;18!CL:0000789;1.37e-10;18!CL:0002419;1.37e-10;18!CL:0000542;1.72e-08;53!CL:0000084;4.39e-08;25!CL:0000625;4.41e-08;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.74e-16,136;CL:0002087,1.43e-15,115;CL:0000838,7.44e-15,52;CL:0000542,1.86e-14,53;CL:0000051,1.86e-14,53;CL:0000037,1.81e-12,168;CL:0002031,7.43e-12,120;CL:0002032,3.54e-11,161;CL:0000837,3.54e-11,161;CL:0000791,1.30e-10,18;CL:0000789,1.30e-10,18;CL:0002420,1.30e-10,18;CL:0002419,1.30e-10,18;CL:0000790,1.30e-10,18;CL:0000988,5.08e-10,177;CL:0000084,4.11e-08,25;CL:0000827,4.11e-08,25;CL:0000625,4.36e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.37e-10;18!CL:0000051;1.72e-08;53!UBERON:0006601;6.09e-07;82 | |ontology_enrichment_development_v019=CL:0000790;1.37e-10;18!CL:0000051;1.72e-08;53!UBERON:0006601;6.09e-07;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-35!115;UBERON:0001049!3.32e-23!57;UBERON:0005068!3.32e-23!57;UBERON:0006241!3.32e-23!57;UBERON:0007135!3.32e-23!57;UBERON:0001017!3.66e-21!82;UBERON:0005743!5.03e-21!86;UBERON:0002780!2.45e-20!41;UBERON:0001890!2.45e-20!41;UBERON:0006240!2.45e-20!41;UBERON:0003080!3.45e-20!42;UBERON:0002616!2.14e-18!59;UBERON:0000073!1.16e-17!94;UBERON:0001016!1.16e-17!94;UBERON:0000955!1.53e-17!69;UBERON:0006238!1.53e-17!69;UBERON:0001893!1.49e-16!34;UBERON:0002020!3.63e-16!34;UBERON:0003528!3.63e-16!34;UBERON:0002791!6.48e-16!33;UBERON:0001869!2.32e-15!32;UBERON:0003075!5.80e-15!86;UBERON:0007284!5.80e-15!86;UBERON:0002619!4.02e-13!22;UBERON:0002346!7.22e-13!90;UBERON:0003056!3.14e-12!61;UBERON:0001950!4.09e-12!20;UBERON:0000956!4.46e-12!25;UBERON:0000203!4.46e-12!25;UBERON:0000153!3.87e-10!129;UBERON:0007811!3.87e-10!129;UBERON:0000033!3.01e-09!123;UBERON:0004121!6.37e-08!169;UBERON:0000924!5.71e-07!173;UBERON:0006601!5.71e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!1.45e-35!115;UBERON:0001049!3.32e-23!57;UBERON:0005068!3.32e-23!57;UBERON:0006241!3.32e-23!57;UBERON:0007135!3.32e-23!57;UBERON:0001017!3.66e-21!82;UBERON:0005743!5.03e-21!86;UBERON:0002780!2.45e-20!41;UBERON:0001890!2.45e-20!41;UBERON:0006240!2.45e-20!41;UBERON:0003080!3.45e-20!42;UBERON:0002616!2.14e-18!59;UBERON:0000073!1.16e-17!94;UBERON:0001016!1.16e-17!94;UBERON:0000955!1.53e-17!69;UBERON:0006238!1.53e-17!69;UBERON:0001893!1.49e-16!34;UBERON:0002020!3.63e-16!34;UBERON:0003528!3.63e-16!34;UBERON:0002791!6.48e-16!33;UBERON:0001869!2.32e-15!32;UBERON:0003075!5.80e-15!86;UBERON:0007284!5.80e-15!86;UBERON:0002619!4.02e-13!22;UBERON:0002346!7.22e-13!90;UBERON:0003056!3.14e-12!61;UBERON:0001950!4.09e-12!20;UBERON:0000956!4.46e-12!25;UBERON:0000203!4.46e-12!25;UBERON:0000153!3.87e-10!129;UBERON:0007811!3.87e-10!129;UBERON:0000033!3.01e-09!123;UBERON:0004121!6.37e-08!169;UBERON:0000924!5.71e-07!173;UBERON:0006601!5.71e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.73e-15;41!UBERON:0001890;2.73e-15;41!UBERON:0001893;9.26e-15;34!UBERON:0001869;2.19e-14;32!UBERON:0003528;2.68e-14;34!UBERON:0002020;2.68e-14;34!UBERON:0002791;2.83e-14;32!UBERON:0002619;1.57e-13;22!UBERON:0000073;3.60e-13;53!UBERON:0002616;3.60e-13;53!UBERON:0001950;1.75e-12;20!UBERON:0000956;1.92e-12;25!UBERON:0000203;1.92e-12;25!UBERON:0007023;3.38e-10;114!UBERON:0001017;5.97e-09;75!UBERON:0000955;7.70e-09;68!UBERON:0001016;2.62e-07;83 | |ontology_enrichment_uberon_v019=UBERON:0002780;2.73e-15;41!UBERON:0001890;2.73e-15;41!UBERON:0001893;9.26e-15;34!UBERON:0001869;2.19e-14;32!UBERON:0003528;2.68e-14;34!UBERON:0002020;2.68e-14;34!UBERON:0002791;2.83e-14;32!UBERON:0002619;1.57e-13;22!UBERON:0000073;3.60e-13;53!UBERON:0002616;3.60e-13;53!UBERON:0001950;1.75e-12;20!UBERON:0000956;1.92e-12;25!UBERON:0000203;1.92e-12;25!UBERON:0007023;3.38e-10;114!UBERON:0001017;5.97e-09;75!UBERON:0000955;7.70e-09;68!UBERON:0001016;2.62e-07;83 | ||
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| ||
|short_description=p1@SORL1 | |short_description=p1@SORL1 | ||
}} | }} |
Revision as of 10:56, 19 November 2012
Short description: | p1@SORL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SORL1_5end |
Coexpression cluster: | C3100_Neutrophils_occipital_Eosinophils_CD4_temporal_pineal_parietal |
Association with transcript: | 39bp_to_uc001pxx.2_5end |
EntrezGene: | SORL1 |
HGNC: | 11185 |
UniProt: | Q92673 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.74e-16 | 136 |
nongranular leukocyte | 1.43e-15 | 115 |
lymphoid lineage restricted progenitor cell | 7.44e-15 | 52 |
lymphocyte | 1.86e-14 | 53 |
common lymphoid progenitor | 1.86e-14 | 53 |
hematopoietic stem cell | 1.81e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 7.43e-12 | 120 |
hematopoietic oligopotent progenitor cell | 3.54e-11 | 161 |
hematopoietic multipotent progenitor cell | 3.54e-11 | 161 |
mature alpha-beta T cell | 1.30e-10 | 18 |
alpha-beta T cell | 1.30e-10 | 18 |
immature T cell | 1.30e-10 | 18 |
mature T cell | 1.30e-10 | 18 |
immature alpha-beta T cell | 1.30e-10 | 18 |
hematopoietic cell | 5.08e-10 | 177 |
T cell | 4.11e-08 | 25 |
pro-T cell | 4.11e-08 | 25 |
CD8-positive, alpha-beta T cell | 4.36e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.74e-36 | 114 |
neural tube | 1.18e-23 | 56 |
neural rod | 1.18e-23 | 56 |
future spinal cord | 1.18e-23 | 56 |
neural keel | 1.18e-23 | 56 |
regional part of nervous system | 2.59e-22 | 53 |
regional part of brain | 2.59e-22 | 53 |
central nervous system | 4.59e-21 | 81 |
regional part of forebrain | 5.22e-21 | 41 |
forebrain | 5.22e-21 | 41 |
anterior neural tube | 5.22e-21 | 41 |
future forebrain | 5.22e-21 | 41 |
nervous system | 1.13e-17 | 89 |
brain | 2.46e-17 | 68 |
future brain | 2.46e-17 | 68 |
telencephalon | 4.35e-17 | 34 |
brain grey matter | 1.09e-16 | 34 |
gray matter | 1.09e-16 | 34 |
cerebral hemisphere | 7.47e-16 | 32 |
regional part of telencephalon | 9.13e-16 | 32 |
organ system subdivision | 2.24e-14 | 223 |
regional part of cerebral cortex | 1.55e-13 | 22 |
neural plate | 4.30e-13 | 82 |
presumptive neural plate | 4.30e-13 | 82 |
neocortex | 1.72e-12 | 20 |
cerebral cortex | 1.88e-12 | 25 |
pallium | 1.88e-12 | 25 |
pre-chordal neural plate | 6.71e-12 | 61 |
neurectoderm | 4.43e-11 | 86 |
ecto-epithelium | 1.29e-10 | 104 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.