FFCP PHASE1:Hg19::chr2:219157219..219157245,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!2.65e-12!42;CL:0000766!1.20e-11!76;CL:0000839!6.21e-11!70;CL:0002194!2.10e-10!63;CL:0000576!2.10e-10!63;CL:0000040!2.10e-10!63;CL:0000559!2.10e-10!63;CL:0000860!7.93e-10!45;CL:0002009!1.95e-09!65;CL:0000557!8.89e-09!71 | |ontology_enrichment_celltype=CL:0002057!2.65e-12!42;CL:0000766!1.20e-11!76;CL:0000839!6.21e-11!70;CL:0002194!2.10e-10!63;CL:0000576!2.10e-10!63;CL:0000040!2.10e-10!63;CL:0000559!2.10e-10!63;CL:0000860!7.93e-10!45;CL:0002009!1.95e-09!65;CL:0000557!8.89e-09!71 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.87e-14;39!CL:0000234;3.87e-14;39!CL:0000860;4.53e-14;33!CL:0002057;4.53e-14;33!CL:0000576;1.27e-07;48!CL:0000766;7.86e-07;69!CL:0000136;8.39e-07;13 | |ontology_enrichment_celltype_v019=CL:0000473;3.87e-14;39!CL:0000234;3.87e-14;39!CL:0000860;4.53e-14;33!CL:0002057;4.53e-14;33!CL:0000576;1.27e-07;48!CL:0000766;7.86e-07;69!CL:0000136;8.39e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.35e-15,48;CL:0000234,6.35e-15,48;CL:0000766,1.05e-13,72;CL:0000839,5.14e-13,66;CL:0002194,1.45e-12,59;CL:0000576,1.45e-12,59;CL:0000040,1.45e-12,59;CL:0000559,1.45e-12,59;CL:0000860,2.65e-12,42;CL:0002057,2.65e-12,42;CL:0002009,2.06e-11,61;CL:0000557,1.51e-10,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.40e-09;42 | |ontology_enrichment_development_v019=CL:0002057;1.40e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!1.43e-15!448;UBERON:0004120!1.43e-15!448;UBERON:0006603!1.43e-15!448;UBERON:0000467!2.37e-15!625;UBERON:0000468!3.97e-15!659;UBERON:0000480!4.46e-15!626;UBERON:0003081!2.75e-14!216;UBERON:0002050!2.26e-12!605;UBERON:0005423!2.26e-12!605;UBERON:0000923!2.28e-12!604;UBERON:0005291!2.28e-12!604;UBERON:0006598!2.28e-12!604;UBERON:0002532!2.28e-12!604;UBERON:0000062!5.19e-11!511;UBERON:0000922!7.59e-11!612;UBERON:0002405!9.37e-09!115;UBERON:0002371!9.41e-09!80;UBERON:0002204!5.99e-08!167;UBERON:0004765!1.64e-07!101;UBERON:0001434!1.64e-07!101;UBERON:0002193!3.97e-07!112;UBERON:0002390!6.18e-07!102;UBERON:0003061!6.18e-07!102;UBERON:0000479!6.84e-07!787 | |ontology_enrichment_uberon=UBERON:0000926!1.43e-15!448;UBERON:0004120!1.43e-15!448;UBERON:0006603!1.43e-15!448;UBERON:0000467!2.37e-15!625;UBERON:0000468!3.97e-15!659;UBERON:0000480!4.46e-15!626;UBERON:0003081!2.75e-14!216;UBERON:0002050!2.26e-12!605;UBERON:0005423!2.26e-12!605;UBERON:0000923!2.28e-12!604;UBERON:0005291!2.28e-12!604;UBERON:0006598!2.28e-12!604;UBERON:0002532!2.28e-12!604;UBERON:0000062!5.19e-11!511;UBERON:0000922!7.59e-11!612;UBERON:0002405!9.37e-09!115;UBERON:0002371!9.41e-09!80;UBERON:0002204!5.99e-08!167;UBERON:0004765!1.64e-07!101;UBERON:0001434!1.64e-07!101;UBERON:0002193!3.97e-07!112;UBERON:0002390!6.18e-07!102;UBERON:0003061!6.18e-07!102;UBERON:0000479!6.84e-07!787 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,9.19e-14,203;UBERON:0005423,2.36e-13,581;UBERON:0000926,1.36e-12,315;UBERON:0004120,1.36e-12,315;UBERON:0006603,1.36e-12,315;UBERON:0002050,2.96e-12,564;UBERON:0000923,2.94e-11,560;UBERON:0010316,2.94e-11,560;UBERON:0005291,2.94e-11,560;UBERON:0006598,2.94e-11,560;UBERON:0010317,2.94e-11,560;UBERON:0002532,2.94e-11,560;UBERON:0000922,3.81e-11,592;UBERON:0002371,2.19e-10,76;UBERON:0002204,3.57e-09,167;UBERON:0004765,4.19e-09,90;UBERON:0001434,8.69e-09,100;UBERON:0002193,2.78e-08,108;UBERON:0002405,3.19e-08,93;UBERON:0002390,3.93e-08,98;UBERON:0003061,3.93e-08,98;UBERON:0001474,6.61e-08,82;UBERON:0000479,4.13e-07,773 | |||
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| ||
|short_description=p1@TMBIM1 | |short_description=p1@TMBIM1 | ||
}} | }} |
Revision as of 10:35, 19 November 2012
Short description: | p1@TMBIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMBIM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000413976, ENST00000437694, ENST00000445635, ENST00000495113, ENST00000543441_5end |
EntrezGene: | TMBIM1 |
HGNC: | 23410 |
UniProt: | C9JM62B4DUD2B3KSM0B4DNZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.35e-15 | 48 |
phagocyte | 6.35e-15 | 48 |
myeloid leukocyte | 1.05e-13 | 72 |
myeloid lineage restricted progenitor cell | 5.14e-13 | 66 |
monopoietic cell | 1.45e-12 | 59 |
monocyte | 1.45e-12 | 59 |
monoblast | 1.45e-12 | 59 |
promonocyte | 1.45e-12 | 59 |
classical monocyte | 2.65e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-12 | 42 |
macrophage dendritic cell progenitor | 2.06e-11 | 61 |
granulocyte monocyte progenitor cell | 1.51e-10 | 67 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 9.19e-14 | 203 |
developing anatomical structure | 2.36e-13 | 581 |
mesoderm | 1.36e-12 | 315 |
mesoderm-derived structure | 1.36e-12 | 315 |
presumptive mesoderm | 1.36e-12 | 315 |
embryonic structure | 2.96e-12 | 564 |
germ layer | 2.94e-11 | 560 |
germ layer / neural crest | 2.94e-11 | 560 |
embryonic tissue | 2.94e-11 | 560 |
presumptive structure | 2.94e-11 | 560 |
germ layer / neural crest derived structure | 2.94e-11 | 560 |
epiblast (generic) | 2.94e-11 | 560 |
embryo | 3.81e-11 | 592 |
bone marrow | 2.19e-10 | 76 |
musculoskeletal system | 3.57e-09 | 167 |
skeletal element | 4.19e-09 | 90 |
skeletal system | 8.69e-09 | 100 |
hemolymphoid system | 2.78e-08 | 108 |
immune system | 3.19e-08 | 93 |
hematopoietic system | 3.93e-08 | 98 |
blood island | 3.93e-08 | 98 |
bone element | 6.61e-08 | 82 |
tissue | 4.13e-07 | 773 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.