FFCP PHASE1:Hg19::chr11:1890037..1890053,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000188!1.13e-08!9;CL:0000153!1.02e-07!9;CL:0000447!1.02e-07!9 | |ontology_enrichment_celltype=CL:0000188!1.13e-08!9;CL:0000153!1.02e-07!9;CL:0000447!1.02e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.97e-12;9!CL:0000447;2.97e-12;9!CL:0000138;6.97e-10;6!CL:0000056;8.53e-09;4!CL:0000135;3.77e-08;3!CL:0000388;3.77e-08;3!CL:0000515;6.55e-07;3!CL:0000327;8.31e-07;15 | |ontology_enrichment_celltype_v019=CL:0000153;2.97e-12;9!CL:0000447;2.97e-12;9!CL:0000138;6.97e-10;6!CL:0000056;8.53e-09;4!CL:0000135;3.77e-08;3!CL:0000388;3.77e-08;3!CL:0000515;6.55e-07;3!CL:0000327;8.31e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,3.13e-12,9;CL:0000447,3.13e-12,9;CL:0000058,7.31e-10,6;CL:0000138,7.31e-10,6;CL:0000515,6.21e-09,4;CL:0000135,3.69e-08,3;CL:0000388,3.69e-08,3;CL:0000327,8.56e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000515;8.53e-09;4!UBERON:0006603;1.15e-08;65 | |ontology_enrichment_development_v019=CL:0000515;8.53e-09;4!UBERON:0006603;1.15e-08;65 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-26!115;UBERON:0000479!3.07e-07!787;UBERON:0000481!6.45e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!2.78e-26!115;UBERON:0000479!3.07e-07!787;UBERON:0000481!6.45e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.46e-11;16!UBERON:0002036;8.46e-11;16!UBERON:0007846;3.77e-08;3!UBERON:0000043;3.77e-08;3!UBERON:0007845;3.77e-08;3!UBERON:0003978;1.32e-07;3!UBERON:0000946;1.32e-07;3!UBERON:0006947;4.33e-07;3!UBERON:0004054;4.33e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001134;8.46e-11;16!UBERON:0002036;8.46e-11;16!UBERON:0007846;3.77e-08;3!UBERON:0000043;3.77e-08;3!UBERON:0007845;3.77e-08;3!UBERON:0003978;1.32e-07;3!UBERON:0000946;1.32e-07;3!UBERON:0006947;4.33e-07;3!UBERON:0004054;4.33e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.08e-21,114;UBERON:0007846,3.69e-08,3;UBERON:0000043,3.69e-08,3;UBERON:0007845,3.69e-08,3;UBERON:0003978,1.40e-07,3;UBERON:0009751,1.40e-07,3;UBERON:0000946,1.40e-07,3;UBERON:0002523,1.40e-07,3;UBERON:0005983,1.40e-07,3;UBERON:0002165,1.40e-07,3;UBERON:0002062,1.40e-07,3;UBERON:0007280,1.40e-07,3;UBERON:0006947,4.43e-07,3;UBERON:0004054,4.43e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,3.91778442299758,0,0,0,0,1.73272894144065,0.994192127183747,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.373248638229,11.0294340339896,6.22840031531542,7.95285947051099,15.0856809793817,0,0,0.087834785693126,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,1.55605517699883,0,0,0,0,0.937285727335186,0,0,0,0,0,0,0.204154171254893,0,0.723280468230358,0,0,2.73048408581408,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.8231480226628,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,5.19967392639789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0.771622122786426,0,0,0,46.1228364582727,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,5.70547620162874,1.73737568001095,5.54786070886035,6.26713371339634,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.981531933753119,1.50051156317903,0.542530047399471,0,0,0,0,0.601892199455438,0,3.10419213877515,0.664225598535437,0,0,0.195801157462741,3.43143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.366277859273374,0.330037999682352,0,0,0,1.64340221096607,0.616194468458578,0.460511024178389,0.413509717453592,0.107420244868274,0.870100163485371,0.852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,2.1396949401696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,12.6664581178598,11.8546161465565,0.379473173765715,1.04980416073495,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,0,0.140669416410513,0,0,0,8.16916751829386,8.01223355040328,0,0,0,0,0,0,0,5.72131752694215,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,13.6971460136759,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,1.06149077404007,0,0,0,0,0.337005664903385,4.01288823649394,0,0,0,0,3.15667522279512,0,0,1.70603764996917,0,0,0,0,0,0,0,0,0,0.391969589657511,0,7.5132467344073,0,0,0,0,4.46149475846729,0,6.55344148263544,0,0,0.0633107959558787,0,0,5.33632486848381,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6668976941468,15.1245879847711,2.15361907373044,1.59743200399193,1.28767814440971,2.90122894674434,1.2764859772478,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0.387848869084652,0,0,0,0.106787412567695,0.471612915298998,0,0.992332043623902,0,0,0,2.1760712134779,1.2534494701135,3.06345576763462,1.63936315354902,0,0,0,0,0.573409195690071,0,0.310482014706917,0,0.37494122388632,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,2.0125432140206,4.44905610798268,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,4.00027764663154,5.49433128292469,7.0717392640843,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,1.52552838186867,0,0,1.5794168953344,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,12.9014906381217,0,0,1.07140367175657,0,0,0,0.709618961301111,0,0.685952037749674,0.0679697329768317,0.0657727735628491,0,0,4.31712010677827,0,0,0.913158720509496,0,0,22.87249413653,0,0,0,0,0,0.17071847709395,0,5.59295566466361,0,0,3.38709640152743,0,0,0,0,0,0,1.94228651156368,4.92781472909986,6.95888658802919,1.45713297917742,0,0,0,0,0,0,1.00326405540328,0,0,5.39326307858592,0,0.588925401344836,0,0.4226557275834,0,4.98114765293224,0,0,0,0,0,5.11235471772562,6.88093925106811,0,0,0.0679914901909147,0,2.1161073620616,11.903840581336,26.3440108319908,31.5817390350366,0,0,0,0,0,0,0,2.95536923051134,4.82335434281121,0,0,15.9925486425736,2.85677317756488,0.0645889098360061,0,0,1.0820016907288,1.61693751166575,10.0149704032602,7.52913262387618,1.41439311330634,1.2192774916755,4.32458463509817,0.162806537221949,0,0,0,9.38563769613817,3.54500188130313,0,1.99727032255654,7.24585656927694,0 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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,3.91778442299758,0,0,0,0,1.73272894144065,0.994192127183747,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.373248638229,11.0294340339896,6.22840031531542,7.95285947051099,15.0856809793817,0,0,0.087834785693126,1.96468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,1.55605517699883,0,0,0,0,0.937285727335186,0,0,0,0,0,0,0.204154171254893,0,0.723280468230358,0,0,2.73048408581408,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,1.45481451136931,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0.8231480226628,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.325808305310325,5.19967392639789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0.771622122786426,0,0,0,46.1228364582727,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,5.70547620162874,1.73737568001095,5.54786070886035,6.26713371339634,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.981531933753119,1.50051156317903,0.542530047399471,0,0,0,0,0.601892199455438,0,3.10419213877515,0.664225598535437,0,0,0.195801157462741,3.43143423810856,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.366277859273374,0.330037999682352,0,0,0,1.64340221096607,0.616194468458578,0.460511024178389,0.413509717453592,0.107420244868274,0.870100163485371,0.852266274161009,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,2.1396949401696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.196498082026242,0,0,12.6664581178598,11.8546161465565,0.379473173765715,1.04980416073495,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19762268907841,0,0,0,0,0,0,0,0.140669416410513,0,0,0,8.16916751829386,8.01223355040328,0,0,0,0,0,0,0,5.72131752694215,0,0,0,0,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,13.6971460136759,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,1.06149077404007,0,0,0,0,0.337005664903385,4.01288823649394,0,0,0,0,3.15667522279512,0,0,1.70603764996917,0,0,0,0,0,0,0,0,0,0.391969589657511,0,7.5132467344073,0,0,0,0,4.46149475846729,0,6.55344148263544,0,0,0.0633107959558787,0,0,5.33632486848381,1.19885765749278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.6668976941468,15.1245879847711,2.15361907373044,1.59743200399193,1.28767814440971,2.90122894674434,1.2764859772478,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0,0.170388021785422,0,0.293104467356165,0,0.387848869084652,0,0,0,0.106787412567695,0.471612915298998,0,0.992332043623902,0,0,0,2.1760712134779,1.2534494701135,3.06345576763462,1.63936315354902,0,0,0,0,0.573409195690071,0,0.310482014706917,0,0.37494122388632,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,2.0125432140206,4.44905610798268,0,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,4.00027764663154,5.49433128292469,7.0717392640843,5.04739592914604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,1.52552838186867,0,0,1.5794168953344,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0.548257766857182,12.9014906381217,0,0,1.07140367175657,0,0,0,0.709618961301111,0,0.685952037749674,0.0679697329768317,0.0657727735628491,0,0,4.31712010677827,0,0,0.913158720509496,0,0,22.87249413653,0,0,0,0,0,0.17071847709395,0,5.59295566466361,0,0,3.38709640152743,0,0,0,0,0,0,1.94228651156368,4.92781472909986,6.95888658802919,1.45713297917742,0,0,0,0,0,0,1.00326405540328,0,0,5.39326307858592,0,0.588925401344836,0,0.4226557275834,0,4.98114765293224,0,0,0,0,0,5.11235471772562,6.88093925106811,0,0,0.0679914901909147,0,2.1161073620616,11.903840581336,26.3440108319908,31.5817390350366,0,0,0,0,0,0,0,2.95536923051134,4.82335434281121,0,0,15.9925486425736,2.85677317756488,0.0645889098360061,0,0,1.0820016907288,1.61693751166575,10.0149704032602,7.52913262387618,1.41439311330634,1.2192774916755,4.32458463509817,0.162806537221949,0,0,0,9.38563769613817,3.54500188130313,0,1.99727032255654,7.24585656927694,0 | ||
|short_description=p6@LSP1 | |short_description=p6@LSP1 | ||
}} | }} |
Revision as of 07:50, 19 November 2012
Short description: | p6@LSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LSP1_5end |
Coexpression cluster: | C2118_Mesenchymal_Chondrocyte_tenocyte_retina_Synoviocyte_heart_spleen |
Association with transcript: | 134bp_to_ENST00000405957, NM_001013253, uc001luk.2_5end |
EntrezGene: | LSP1 |
HGNC: | 6707 |
UniProt: | E9PBV6P33241 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 3.13e-12 | 9 |
carbohydrate secreting cell | 3.13e-12 | 9 |
chondroblast | 7.31e-10 | 6 |
chondrocyte | 7.31e-10 | 6 |
skeletal muscle myoblast | 6.21e-09 | 4 |
fibrocyte | 3.69e-08 | 3 |
tendon cell | 3.69e-08 | 3 |
extracellular matrix secreting cell | 8.56e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.08e-21 | 114 |
dense regular connective tissue | 3.69e-08 | 3 |
tendon | 3.69e-08 | 3 |
regular connective tissue | 3.69e-08 | 3 |
valve | 1.40e-07 | 3 |
cardiac mesenchyme | 1.40e-07 | 3 |
cardial valve | 1.40e-07 | 3 |
tunica intima | 1.40e-07 | 3 |
heart layer | 1.40e-07 | 3 |
endocardium | 1.40e-07 | 3 |
endocardial cushion | 1.40e-07 | 3 |
presumptive endocardium | 1.40e-07 | 3 |
male genital duct | 4.43e-07 | 3 |
internal male genitalia | 4.43e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.