FFCP PHASE1:Hg19::chr21:36260343..36260402,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000012!1.43e-21!682;CL:0002371!3.74e-21!591;CL:0000548!8.12e-21!679;CL:0000004!8.12e-21!679;CL:0000255!8.12e-21!679;CL:0000144!9.02e-21!625;CL:0002057!2.49e-18!42;CL:0000860!4.76e-16!45;CL:0000003!1.33e-13!722;CL:0000723!1.67e-13!436;CL:0000048!4.55e-13!430;CL:0000034!1.14e-12!444;CL:0002194!2.59e-11!63;CL:0000576!2.59e-11!63;CL:0000040!2.59e-11!63;CL:0000559!2.59e-11!63;CL:0000063!2.61e-11!578;CL:0002009!3.70e-10!65;CL:0002320!4.14e-10!365;CL:0000134!8.57e-10!358;CL:0000839!1.55e-09!70;CL:0000557!2.20e-09!71;CL:0000766!4.11e-09!76;CL:0000055!2.69e-07!180;CL:0000219!4.61e-07!390 | |ontology_enrichment_celltype=CL:0000012!1.43e-21!682;CL:0002371!3.74e-21!591;CL:0000548!8.12e-21!679;CL:0000004!8.12e-21!679;CL:0000255!8.12e-21!679;CL:0000144!9.02e-21!625;CL:0002057!2.49e-18!42;CL:0000860!4.76e-16!45;CL:0000003!1.33e-13!722;CL:0000723!1.67e-13!436;CL:0000048!4.55e-13!430;CL:0000034!1.14e-12!444;CL:0002194!2.59e-11!63;CL:0000576!2.59e-11!63;CL:0000040!2.59e-11!63;CL:0000559!2.59e-11!63;CL:0000063!2.61e-11!578;CL:0002009!3.70e-10!65;CL:0002320!4.14e-10!365;CL:0000134!8.57e-10!358;CL:0000839!1.55e-09!70;CL:0000557!2.20e-09!71;CL:0000766!4.11e-09!76;CL:0000055!2.69e-07!180;CL:0000219!4.61e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.48e-24;33!CL:0002057;6.48e-24;33!CL:0000473;5.93e-15;39!CL:0000234;5.93e-15;39!CL:0000576;1.74e-11;48!CL:0000766;4.02e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;6.48e-24;33!CL:0002057;6.48e-24;33!CL:0000473;5.93e-15;39!CL:0000234;5.93e-15;39!CL:0000576;1.74e-11;48!CL:0000766;4.02e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.39e-23,42;CL:0002057,5.39e-23,42;CL:0000473,6.74e-18,48;CL:0000234,6.74e-18,48;CL:0000723,5.92e-14,433;CL:0000034,1.75e-13,441;CL:0000048,2.48e-13,427;CL:0002194,4.36e-13,59;CL:0000576,4.36e-13,59;CL:0000040,4.36e-13,59;CL:0000559,4.36e-13,59;CL:0000766,3.42e-12,72;CL:0002009,3.82e-12,61;CL:0000557,7.26e-12,67;CL:0000839,9.82e-12,66;CL:0002320,7.64e-11,361;CL:0000134,1.05e-10,354;CL:0000219,4.58e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.29e-17;42 | |ontology_enrichment_development_v019=CL:0002057;3.29e-17;42 | ||
|ontology_enrichment_disease=DOID:2394!1.23e-07!14 | |ontology_enrichment_disease=DOID:2394!1.23e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.02e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;2.02e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.34e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.70e-12!167;UBERON:0002384!1.09e-09!375;UBERON:0002371!3.67e-08!80;UBERON:0001474!2.36e-07!86;UBERON:0004765!3.87e-07!101;UBERON:0001434!3.87e-07!101;UBERON:0003102!4.51e-07!95;UBERON:0000486!6.65e-07!82 | |ontology_enrichment_uberon=UBERON:0002204!5.70e-12!167;UBERON:0002384!1.09e-09!375;UBERON:0002371!3.67e-08!80;UBERON:0001474!2.36e-07!86;UBERON:0004765!3.87e-07!101;UBERON:0001434!3.87e-07!101;UBERON:0003102!4.51e-07!95;UBERON:0000486!6.65e-07!82 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.21e-12,167;UBERON:0004765,7.42e-11,90;UBERON:0002371,7.72e-11,76;UBERON:0002384,1.12e-10,371;UBERON:0001474,2.57e-10,82;UBERON:0001434,1.90e-09,100;UBERON:0002390,5.52e-08,98;UBERON:0003061,5.52e-08,98;UBERON:0000926,1.05e-07,315;UBERON:0004120,1.05e-07,315;UBERON:0006603,1.05e-07,315 | |||
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| ||
|short_description=p6@RUNX1 | |short_description=p6@RUNX1 | ||
}} | }} |
Revision as of 06:25, 19 November 2012
Short description: | p6@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RUNX1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -166bp_to_D10570_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | Q01196 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.39e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.39e-23 | 42 |
defensive cell | 6.74e-18 | 48 |
phagocyte | 6.74e-18 | 48 |
somatic stem cell | 5.92e-14 | 433 |
stem cell | 1.75e-13 | 441 |
multi fate stem cell | 2.48e-13 | 427 |
monopoietic cell | 4.36e-13 | 59 |
monocyte | 4.36e-13 | 59 |
monoblast | 4.36e-13 | 59 |
promonocyte | 4.36e-13 | 59 |
myeloid leukocyte | 3.42e-12 | 72 |
macrophage dendritic cell progenitor | 3.82e-12 | 61 |
granulocyte monocyte progenitor cell | 7.26e-12 | 67 |
myeloid lineage restricted progenitor cell | 9.82e-12 | 66 |
connective tissue cell | 7.64e-11 | 361 |
mesenchymal cell | 1.05e-10 | 354 |
motile cell | 4.58e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.21e-12 | 167 |
skeletal element | 7.42e-11 | 90 |
bone marrow | 7.72e-11 | 76 |
connective tissue | 1.12e-10 | 371 |
bone element | 2.57e-10 | 82 |
skeletal system | 1.90e-09 | 100 |
hematopoietic system | 5.52e-08 | 98 |
blood island | 5.52e-08 | 98 |
mesoderm | 1.05e-07 | 315 |
mesoderm-derived structure | 1.05e-07 | 315 |
presumptive mesoderm | 1.05e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.34e-09 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.