FFCP PHASE1:Hg19::chr6:138428613..138428624,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.71e-22!254;CL:0000220!5.75e-19!246;CL:0002321!7.68e-19!248;CL:0000055!3.65e-12!180;CL:0000222!2.25e-10!119;CL:0000192!1.57e-08!42;CL:0000514!1.57e-08!42;CL:0000183!1.72e-08!59;CL:0000548!8.82e-08!679;CL:0000004!8.82e-08!679;CL:0000255!8.82e-08!679;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57;CL:0000187!2.31e-07!54;CL:0000012!4.55e-07!682;CL:0000057!9.41e-07!75 | |ontology_enrichment_celltype=CL:0000066!1.71e-22!254;CL:0000220!5.75e-19!246;CL:0002321!7.68e-19!248;CL:0000055!3.65e-12!180;CL:0000222!2.25e-10!119;CL:0000192!1.57e-08!42;CL:0000514!1.57e-08!42;CL:0000183!1.72e-08!59;CL:0000548!8.82e-08!679;CL:0000004!8.82e-08!679;CL:0000255!8.82e-08!679;CL:0000680!1.57e-07!57;CL:0000056!1.57e-07!57;CL:0000355!1.57e-07!57;CL:0000187!2.31e-07!54;CL:0000012!4.55e-07!682;CL:0000057!9.41e-07!75 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.82e-22,253;CL:0002321,5.26e-19,250;CL:0000222,1.36e-10,121;CL:0000192,1.43e-08,43;CL:0000514,1.43e-08,43;CL:0000680,1.53e-07,58;CL:0000056,1.53e-07,58;CL:0000355,1.53e-07,58;CL:0000187,2.28e-07,55;CL:0000057,4.65e-07,76 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:193!2.73e-07!29;DOID:120!4.67e-07!27 | |ontology_enrichment_disease=DOID:193!2.73e-07!29;DOID:120!4.67e-07!27 | ||
|ontology_enrichment_disease_v019=DOID:193;2.80e-07;29!DOID:120;5.28e-07;27!DOID:2394;9.69e-07;14 | |ontology_enrichment_disease_v019=DOID:193;2.80e-07;29!DOID:120;5.28e-07;27!DOID:2394;9.69e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:193,2.26e-07,29;DOID:120,3.91e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002100!7.88e-16!216;UBERON:0003104!5.96e-14!238;UBERON:0009142!5.96e-14!238;UBERON:0005256!1.63e-11!143;UBERON:0000481!3.50e-11!347;UBERON:0000466!8.33e-11!126;UBERON:0000475!1.28e-10!365;UBERON:0000464!1.67e-10!104;UBERON:0003914!2.18e-10!118;UBERON:0004119!2.53e-10!169;UBERON:0000925!2.53e-10!169;UBERON:0006595!2.53e-10!169;UBERON:0002049!1.87e-09!79;UBERON:0007798!1.87e-09!79;UBERON:0000490!2.00e-09!138;UBERON:0002553!3.05e-08!70;UBERON:0009569!3.37e-08!113;UBERON:0001007!4.14e-08!155;UBERON:0001555!4.14e-08!155;UBERON:0007026!4.14e-08!155;UBERON:0000468!4.43e-08!659;UBERON:0000119!6.70e-08!312;UBERON:0000486!9.60e-08!82;UBERON:0000483!1.24e-07!309;UBERON:0000914!2.27e-07!83;UBERON:0002329!2.27e-07!83;UBERON:0003077!2.27e-07!83;UBERON:0003059!2.27e-07!83;UBERON:0007282!2.27e-07!83;UBERON:0009618!2.27e-07!83;UBERON:0007285!2.27e-07!83;UBERON:0005156!2.74e-07!59;UBERON:0000990!2.74e-07!59;UBERON:0000055!3.34e-07!69;UBERON:0004921!4.90e-07!129;UBERON:0004185!4.90e-07!129;UBERON:0003102!5.93e-07!95;UBERON:0001637!6.12e-07!42;UBERON:0003509!6.12e-07!42;UBERON:0004572!6.12e-07!42;UBERON:0004872!6.76e-07!84 | |ontology_enrichment_uberon=UBERON:0002100!7.88e-16!216;UBERON:0003104!5.96e-14!238;UBERON:0009142!5.96e-14!238;UBERON:0005256!1.63e-11!143;UBERON:0000481!3.50e-11!347;UBERON:0000466!8.33e-11!126;UBERON:0000475!1.28e-10!365;UBERON:0000464!1.67e-10!104;UBERON:0003914!2.18e-10!118;UBERON:0004119!2.53e-10!169;UBERON:0000925!2.53e-10!169;UBERON:0006595!2.53e-10!169;UBERON:0002049!1.87e-09!79;UBERON:0007798!1.87e-09!79;UBERON:0000490!2.00e-09!138;UBERON:0002553!3.05e-08!70;UBERON:0009569!3.37e-08!113;UBERON:0001007!4.14e-08!155;UBERON:0001555!4.14e-08!155;UBERON:0007026!4.14e-08!155;UBERON:0000468!4.43e-08!659;UBERON:0000119!6.70e-08!312;UBERON:0000486!9.60e-08!82;UBERON:0000483!1.24e-07!309;UBERON:0000914!2.27e-07!83;UBERON:0002329!2.27e-07!83;UBERON:0003077!2.27e-07!83;UBERON:0003059!2.27e-07!83;UBERON:0007282!2.27e-07!83;UBERON:0009618!2.27e-07!83;UBERON:0007285!2.27e-07!83;UBERON:0005156!2.74e-07!59;UBERON:0000990!2.74e-07!59;UBERON:0000055!3.34e-07!69;UBERON:0004921!4.90e-07!129;UBERON:0004185!4.90e-07!129;UBERON:0003102!5.93e-07!95;UBERON:0001637!6.12e-07!42;UBERON:0003509!6.12e-07!42;UBERON:0004572!6.12e-07!42;UBERON:0004872!6.76e-07!84 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p3@PERP | |short_description=p3@PERP | ||
}} | }} |
Revision as of 05:03, 19 November 2012
Short description: | p3@PERP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PERP_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000421351_5end |
EntrezGene: | PERP |
HGNC: | 17637 |
UniProt: | Q96FX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.82e-22 | 253 |
embryonic cell | 5.26e-19 | 250 |
mesodermal cell | 1.36e-10 | 121 |
smooth muscle cell | 1.43e-08 | 43 |
smooth muscle myoblast | 1.43e-08 | 43 |
muscle precursor cell | 1.53e-07 | 58 |
myoblast | 1.53e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-07 | 58 |
muscle cell | 2.28e-07 | 55 |
fibroblast | 4.65e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
trunk | 4.54e-15 | 199 |
mesenchyme | 6.58e-11 | 160 |
entire embryonic mesenchyme | 6.58e-11 | 160 |
epithelial tube | 1.63e-10 | 117 |
unilaminar epithelium | 8.21e-10 | 148 |
vasculature | 4.42e-09 | 78 |
vascular system | 4.42e-09 | 78 |
endoderm-derived structure | 1.77e-08 | 160 |
endoderm | 1.77e-08 | 160 |
presumptive endoderm | 1.77e-08 | 160 |
trunk mesenchyme | 1.81e-08 | 122 |
subdivision of trunk | 7.07e-08 | 112 |
multilaminar epithelium | 8.98e-08 | 83 |
surface structure | 1.12e-07 | 99 |
reproductive structure | 2.18e-07 | 59 |
reproductive system | 2.18e-07 | 59 |
artery | 4.55e-07 | 42 |
arterial blood vessel | 4.55e-07 | 42 |
arterial system | 4.55e-07 | 42 |
vessel | 7.95e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 2.26e-07 | 29 |
female reproductive organ cancer | 3.91e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.