FFCP PHASE1:Hg19::chr11:5710850..5710888,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000144!9.72e-16!625;CL:0002371!2.16e-15!591;CL:0000048!5.36e-14!430;CL:0000723!6.77e-14!436;CL:0000034!1.02e-13!444;CL:0000003!2.67e-11!722;CL:0000192!2.07e-09!42;CL:0000514!2.07e-09!42;CL:0000542!2.18e-09!53;CL:0000051!2.18e-09!53;CL:0000838!2.40e-09!52;CL:0000359!8.19e-09!32;CL:0000134!3.56e-08!358;CL:0000055!5.85e-08!180;CL:0000945!3.26e-07!24;CL:0000826!3.26e-07!24;CL:0002320!3.57e-07!365 | |ontology_enrichment_celltype=CL:0000144!9.72e-16!625;CL:0002371!2.16e-15!591;CL:0000048!5.36e-14!430;CL:0000723!6.77e-14!436;CL:0000034!1.02e-13!444;CL:0000003!2.67e-11!722;CL:0000192!2.07e-09!42;CL:0000514!2.07e-09!42;CL:0000542!2.18e-09!53;CL:0000051!2.18e-09!53;CL:0000838!2.40e-09!52;CL:0000359!8.19e-09!32;CL:0000134!3.56e-08!358;CL:0000055!5.85e-08!180;CL:0000945!3.26e-07!24;CL:0000826!3.26e-07!24;CL:0002320!3.57e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000359;5.70e-09;32!CL:0000945;2.04e-07;24!CL:0000192;5.48e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;5.70e-09;32!CL:0000945;2.04e-07;24!CL:0000192;5.48e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.64e-15,433;CL:0000048,6.62e-15,427;CL:0000034,8.76e-15,441;CL:0000192,1.30e-09,43;CL:0000514,1.30e-09,43;CL:0000542,1.40e-09,53;CL:0000051,1.40e-09,53;CL:0000838,1.56e-09,52;CL:0000359,2.62e-09,32;CL:0000134,4.56e-09,354;CL:0002320,5.91e-08,361;CL:0000057,7.38e-08,76;CL:0000945,2.08e-07,24;CL:0000826,2.08e-07,24;CL:0000219,2.37e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000514;5.48e-07;43 | |ontology_enrichment_development_v019=CL:0000514;5.48e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.45e-07!110;UBERON:0001637!5.46e-07!42;UBERON:0003509!5.46e-07!42;UBERON:0004572!5.46e-07!42;UBERON:0002049!8.13e-07!79;UBERON:0007798!8.13e-07!79 | |ontology_enrichment_uberon=UBERON:0004535!3.45e-07!110;UBERON:0001637!5.46e-07!42;UBERON:0003509!5.46e-07!42;UBERON:0004572!5.46e-07!42;UBERON:0002049!8.13e-07!79;UBERON:0007798!8.13e-07!79 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.08e-07,371;UBERON:0001637,7.69e-07,42;UBERON:0003509,7.69e-07,42;UBERON:0004572,7.69e-07,42;UBERON:0004535,9.31e-07,109 | |||
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| ||
|short_description=p2@TRIM22 | |short_description=p2@TRIM22 | ||
}} | }} |
Revision as of 23:47, 18 November 2012
Short description: | p2@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000379965, uc001mbr.2, uc009yes.2, uc009yet.1, uc010qzm.1_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | Q8IYM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.64e-15 | 433 |
multi fate stem cell | 6.62e-15 | 427 |
stem cell | 8.76e-15 | 441 |
smooth muscle cell | 1.30e-09 | 43 |
smooth muscle myoblast | 1.30e-09 | 43 |
lymphocyte | 1.40e-09 | 53 |
common lymphoid progenitor | 1.40e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.56e-09 | 52 |
vascular associated smooth muscle cell | 2.62e-09 | 32 |
mesenchymal cell | 4.56e-09 | 354 |
connective tissue cell | 5.91e-08 | 361 |
fibroblast | 7.38e-08 | 76 |
lymphocyte of B lineage | 2.08e-07 | 24 |
pro-B cell | 2.08e-07 | 24 |
motile cell | 2.37e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.08e-07 | 371 |
artery | 7.69e-07 | 42 |
arterial blood vessel | 7.69e-07 | 42 |
arterial system | 7.69e-07 | 42 |
cardiovascular system | 9.31e-07 | 109 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.