FFCP PHASE1:Hg19::chr2:231523565..231523598,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000838!7.25e-22!52;CL:0000542!2.12e-21!53;CL:0000051!2.12e-21!53;CL:0000988!1.03e-15!182;CL:0002032!1.74e-14!165;CL:0000837!1.74e-14!165;CL:0000893!7.55e-14!2;CL:0002489!7.55e-14!2;CL:0000809!7.55e-14!2;CL:0000808!7.55e-14!2;CL:0000894!7.55e-14!2;CL:0000806!7.55e-14!2;CL:0000807!7.55e-14!2;CL:0000805!7.55e-14!2;CL:0002425!7.55e-14!2;CL:0000037!1.01e-13!172;CL:0000566!1.01e-13!172;CL:0000945!1.06e-12!24;CL:0000826!1.06e-12!24;CL:0000084!6.64e-12!25;CL:0000827!6.64e-12!25;CL:0002031!1.57e-11!124;CL:0000738!7.72e-10!140;CL:0002087!3.32e-09!119;CL:0000810!6.97e-08!1;CL:0000895!6.97e-08!1;CL:0002436!6.97e-08!1;CL:0002427!6.97e-08!1;CL:0002428!6.97e-08!1;CL:0002429!6.97e-08!1;CL:0002433!6.97e-08!1;CL:0002431!6.97e-08!1;CL:0002432!6.97e-08!1;CL:0000946!7.45e-08!1;CL:0000786!7.45e-08!1;CL:0000980!7.45e-08!1;CL:0002127!1.18e-07!1;CL:0000914!1.18e-07!1;CL:0000911!1.18e-07!1;CL:0000814!1.18e-07!1;CL:0002042!1.18e-07!1;CL:0002039!1.18e-07!1;CL:0002040!1.18e-07!1;CL:0002041!1.18e-07!1 | |ontology_enrichment_celltype=CL:0000838!7.25e-22!52;CL:0000542!2.12e-21!53;CL:0000051!2.12e-21!53;CL:0000988!1.03e-15!182;CL:0002032!1.74e-14!165;CL:0000837!1.74e-14!165;CL:0000893!7.55e-14!2;CL:0002489!7.55e-14!2;CL:0000809!7.55e-14!2;CL:0000808!7.55e-14!2;CL:0000894!7.55e-14!2;CL:0000806!7.55e-14!2;CL:0000807!7.55e-14!2;CL:0000805!7.55e-14!2;CL:0002425!7.55e-14!2;CL:0000037!1.01e-13!172;CL:0000566!1.01e-13!172;CL:0000945!1.06e-12!24;CL:0000826!1.06e-12!24;CL:0000084!6.64e-12!25;CL:0000827!6.64e-12!25;CL:0002031!1.57e-11!124;CL:0000738!7.72e-10!140;CL:0002087!3.32e-09!119;CL:0000810!6.97e-08!1;CL:0000895!6.97e-08!1;CL:0002436!6.97e-08!1;CL:0002427!6.97e-08!1;CL:0002428!6.97e-08!1;CL:0002429!6.97e-08!1;CL:0002433!6.97e-08!1;CL:0002431!6.97e-08!1;CL:0002432!6.97e-08!1;CL:0000946!7.45e-08!1;CL:0000786!7.45e-08!1;CL:0000980!7.45e-08!1;CL:0002127!1.18e-07!1;CL:0000914!1.18e-07!1;CL:0000911!1.18e-07!1;CL:0000814!1.18e-07!1;CL:0002042!1.18e-07!1;CL:0002039!1.18e-07!1;CL:0002040!1.18e-07!1;CL:0002041!1.18e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.98e-12;24!CL:0000542;5.42e-07;53 | |ontology_enrichment_celltype_v019=CL:0000945;1.98e-12;24!CL:0000542;5.42e-07;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.84e-12,52;CL:0000945,2.11e-12,24;CL:0000826,2.11e-12,24;CL:0000542,3.18e-12,53;CL:0000051,3.18e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;5.42e-07;53 | |ontology_enrichment_development_v019=CL:0000051;5.42e-07;53 | ||
|ontology_enrichment_disease=DOID:0060058!2.89e-16!10;DOID:2531!4.92e-16!51;DOID:0060083!4.92e-16!51;DOID:1240!2.13e-09!39;DOID:0060060!2.70e-08!1;DOID:0060061!2.70e-08!1;DOID:8691!2.70e-08!1;DOID:2355!5.33e-08!1;DOID:630!5.70e-08!1;DOID:0050177!5.70e-08!1;DOID:0050427!5.70e-08!1;DOID:9119!8.51e-08!1;DOID:1036!1.23e-07!8 | |ontology_enrichment_disease=DOID:0060058!2.89e-16!10;DOID:2531!4.92e-16!51;DOID:0060083!4.92e-16!51;DOID:1240!2.13e-09!39;DOID:0060060!2.70e-08!1;DOID:0060061!2.70e-08!1;DOID:8691!2.70e-08!1;DOID:2355!5.33e-08!1;DOID:630!5.70e-08!1;DOID:0050177!5.70e-08!1;DOID:0050427!5.70e-08!1;DOID:9119!8.51e-08!1;DOID:1036!1.23e-07!8 | ||
|ontology_enrichment_disease_v019=DOID:0060060;8.95e-20;1!DOID:0060061;8.95e-20;1!DOID:8691;8.95e-20;1!DOID:2355;3.91e-19;1!DOID:0060058;7.28e-17;10!DOID:74;2.99e-10;2 | |ontology_enrichment_disease_v019=DOID:0060060;8.95e-20;1!DOID:0060061;8.95e-20;1!DOID:8691;8.95e-20;1!DOID:2355;3.91e-19;1!DOID:0060058;7.28e-17;10!DOID:74;2.99e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,8.95e-20,1;DOID:0060061,8.95e-20,1;DOID:8691,8.95e-20,1;DOID:2355,5.62e-19,1;DOID:0060058,8.12e-17,10;DOID:74,3.58e-10,2;DOID:2531,6.27e-09,51;DOID:0060083,6.27e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!6.05e-09!7;UBERON:0002370!2.35e-07!4;UBERON:0005058!2.35e-07!4;UBERON:0009113!2.35e-07!4;UBERON:0003295!2.35e-07!4;UBERON:0005562!2.35e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!6.05e-09!7;UBERON:0002370!2.35e-07!4;UBERON:0005058!2.35e-07!4;UBERON:0009113!2.35e-07!4;UBERON:0003295!2.35e-07!4;UBERON:0005562!2.35e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.97e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002106;2.97e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.97e-07,3;UBERON:0004854,2.97e-07,3;UBERON:0009034,2.97e-07,3;UBERON:0002095,2.97e-07,3;UBERON:0004782,2.97e-07,3;UBERON:0003281,2.97e-07,3;UBERON:0009664,2.97e-07,3;UBERON:0002296,2.97e-07,3;UBERON:0005602,2.97e-07,3;UBERON:0001179,2.97e-07,3;UBERON:0006293,2.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97349709889347,3.36612416744778,3.93553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,2.00538822393312,0,0,0,0.512365278902701,1.43065282315866,0.164437904603676,1.10540007114339,0,0,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0.247127877893006,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73197237702766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79957145906762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19929387109915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97349709889347,3.36612416744778,3.93553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,2.00538822393312,0,0,0,0.512365278902701,1.43065282315866,0.164437904603676,1.10540007114339,0,0,0,0,0.339928028092699,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0.189753732724185,0,0,0,0,0,0,0,0,0,0.247127877893006,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73197237702766,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01607998478941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.79957145906762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19929387109915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr2:231523565..231523598,- | |short_description=p@chr2:231523565..231523598,- | ||
}} | }} |
Revision as of 22:51, 18 November 2012
Short description: | p@chr2:231523565..231523598, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:231523565..231523598, - |
Coexpression cluster: | C826_hairy_B_mycosis_cord_xeroderma_neuroblastoma_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.84e-12 | 52 |
lymphocyte of B lineage | 2.11e-12 | 24 |
pro-B cell | 2.11e-12 | 24 |
lymphocyte | 3.18e-12 | 53 |
common lymphoid progenitor | 3.18e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.97e-07 | 3 |
gastrointestinal system mesentery | 2.97e-07 | 3 |
stomach region | 2.97e-07 | 3 |
mesentery | 2.97e-07 | 3 |
gastrointestinal system serosa | 2.97e-07 | 3 |
mesentery of stomach | 2.97e-07 | 3 |
gut mesentery | 2.97e-07 | 3 |
dorsal mesentery | 2.97e-07 | 3 |
dorsal mesogastrium | 2.97e-07 | 3 |
peritoneal cavity | 2.97e-07 | 3 |
spleen primordium | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 8.95e-20 | 1 |
cutaneous T cell lymphoma | 8.95e-20 | 1 |
mycosis fungoides | 8.95e-20 | 1 |
anemia | 5.62e-19 | 1 |
lymphoma | 8.12e-17 | 10 |
hematopoietic system disease | 3.58e-10 | 2 |
hematologic cancer | 6.27e-09 | 51 |
immune system cancer | 6.27e-09 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.