FFCP PHASE1:Hg19::chr3:19988736..19988747,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!1.34e-09!42;CL:0000860!8.62e-09!45;CL:0000766!1.07e-08!76 | |ontology_enrichment_celltype=CL:0002057!1.34e-09!42;CL:0000860!8.62e-09!45;CL:0000766!1.07e-08!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.00e-13;33!CL:0002057;3.00e-13;33!CL:0000473;7.02e-09;39!CL:0000234;7.02e-09;39!CL:0000094;9.26e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;3.00e-13;33!CL:0002057;3.00e-13;33!CL:0000473;7.02e-09;39!CL:0000234;7.02e-09;39!CL:0000094;9.26e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.89e-13,42;CL:0002057,4.89e-13,42;CL:0000766,2.75e-12,72;CL:0000473,2.95e-10,48;CL:0000234,2.95e-10,48;CL:0000738,6.37e-09,136;CL:0000839,8.26e-09,66;CL:0000557,1.38e-08,67;CL:0002009,4.01e-08,61;CL:0002194,7.36e-08,59;CL:0000576,7.36e-08,59;CL:0000040,7.36e-08,59;CL:0000559,7.36e-08,59;CL:0000763,1.46e-07,108;CL:0000049,1.46e-07,108;CL:0002031,5.31e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.27e-09;42 | |ontology_enrichment_development_v019=CL:0002057;1.27e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-16!115;UBERON:0002390!9.10e-08!102;UBERON:0003061!9.10e-08!102;UBERON:0001049!1.34e-07!57;UBERON:0005068!1.34e-07!57;UBERON:0006241!1.34e-07!57;UBERON:0007135!1.34e-07!57;UBERON:0002193!7.03e-07!112 | |ontology_enrichment_uberon=UBERON:0007023!1.54e-16!115;UBERON:0002390!9.10e-08!102;UBERON:0003061!9.10e-08!102;UBERON:0001049!1.34e-07!57;UBERON:0005068!1.34e-07!57;UBERON:0006241!1.34e-07!57;UBERON:0007135!1.34e-07!57;UBERON:0002193!7.03e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.20e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002619;5.20e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.07e-13,114;UBERON:0002390,2.40e-11,98;UBERON:0003061,2.40e-11,98;UBERON:0001049,3.90e-09,56;UBERON:0005068,3.90e-09,56;UBERON:0006241,3.90e-09,56;UBERON:0007135,3.90e-09,56;UBERON:0002193,5.02e-09,108;UBERON:0000073,1.94e-08,53;UBERON:0002616,1.94e-08,53;UBERON:0002371,2.11e-08,76;UBERON:0001474,3.93e-08,82;UBERON:0002780,1.68e-07,41;UBERON:0001890,1.68e-07,41;UBERON:0003080,1.68e-07,41;UBERON:0006240,1.68e-07,41;UBERON:0003528,2.87e-07,34;UBERON:0002020,2.87e-07,34 | |||
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| ||
|short_description=p6@RAB5A | |short_description=p6@RAB5A | ||
}} | }} |
Revision as of 22:41, 18 November 2012
Short description: | p6@RAB5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RAB5A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000443878_5end |
EntrezGene: | RAB5A |
HGNC: | 9783 |
UniProt: | C9J3X8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.89e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.89e-13 | 42 |
myeloid leukocyte | 2.75e-12 | 72 |
defensive cell | 2.95e-10 | 48 |
phagocyte | 2.95e-10 | 48 |
leukocyte | 6.37e-09 | 136 |
myeloid lineage restricted progenitor cell | 8.26e-09 | 66 |
granulocyte monocyte progenitor cell | 1.38e-08 | 67 |
macrophage dendritic cell progenitor | 4.01e-08 | 61 |
monopoietic cell | 7.36e-08 | 59 |
monocyte | 7.36e-08 | 59 |
monoblast | 7.36e-08 | 59 |
promonocyte | 7.36e-08 | 59 |
myeloid cell | 1.46e-07 | 108 |
common myeloid progenitor | 1.46e-07 | 108 |
hematopoietic lineage restricted progenitor cell | 5.31e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.07e-13 | 114 |
hematopoietic system | 2.40e-11 | 98 |
blood island | 2.40e-11 | 98 |
neural tube | 3.90e-09 | 56 |
neural rod | 3.90e-09 | 56 |
future spinal cord | 3.90e-09 | 56 |
neural keel | 3.90e-09 | 56 |
hemolymphoid system | 5.02e-09 | 108 |
regional part of nervous system | 1.94e-08 | 53 |
regional part of brain | 1.94e-08 | 53 |
bone marrow | 2.11e-08 | 76 |
bone element | 3.93e-08 | 82 |
regional part of forebrain | 1.68e-07 | 41 |
forebrain | 1.68e-07 | 41 |
anterior neural tube | 1.68e-07 | 41 |
future forebrain | 1.68e-07 | 41 |
brain grey matter | 2.87e-07 | 34 |
gray matter | 2.87e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.