FFCP PHASE1:Hg19::chr3:19988907..19988914,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000766!1.86e-11!76;CL:0000839!4.99e-10!70;CL:0000557!1.10e-09!71;CL:0002057!4.72e-09!42;CL:0002009!9.07e-08!65;CL:0002194!1.05e-07!63;CL:0000576!1.05e-07!63;CL:0000040!1.05e-07!63;CL:0000559!1.05e-07!63;CL:0000860!1.56e-07!45 | |ontology_enrichment_celltype=CL:0000766!1.86e-11!76;CL:0000839!4.99e-10!70;CL:0000557!1.10e-09!71;CL:0002057!4.72e-09!42;CL:0002009!9.07e-08!65;CL:0002194!1.05e-07!63;CL:0000576!1.05e-07!63;CL:0000040!1.05e-07!63;CL:0000559!1.05e-07!63;CL:0000860!1.56e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.89e-14;5!CL:0000766;3.54e-10;69!CL:0000473;1.43e-08;39!CL:0000234;1.43e-08;39!CL:0000151;5.11e-08;36!CL:0000860;7.12e-08;33!CL:0002057;7.12e-08;33!CL:0000163;9.33e-08;9 | |ontology_enrichment_celltype_v019=CL:0000097;5.89e-14;5!CL:0000766;3.54e-10;69!CL:0000473;1.43e-08;39!CL:0000234;1.43e-08;39!CL:0000151;5.11e-08;36!CL:0000860;7.12e-08;33!CL:0002057;7.12e-08;33!CL:0000163;9.33e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.39e-15,72;CL:0000097,3.97e-14,5;CL:0002028,3.97e-14,5;CL:0000557,3.13e-13,67;CL:0000839,8.68e-12,66;CL:0000763,3.94e-10,108;CL:0000049,3.94e-10,108;CL:0002009,4.51e-08,61;CL:0000738,5.16e-08,136;CL:0000473,7.49e-08,48;CL:0000234,7.49e-08,48;CL:0000163,7.55e-08,9;CL:0000151,1.40e-07,36;CL:0002194,4.41e-07,59;CL:0000576,4.41e-07,59;CL:0000040,4.41e-07,59;CL:0000559,4.41e-07,59 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.13e-07!80 | |ontology_enrichment_uberon=UBERON:0002371!7.13e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.20e-11,76;UBERON:0002390,3.35e-10,98;UBERON:0003061,3.35e-10,98;UBERON:0001474,3.97e-10,82;UBERON:0004765,6.69e-09,90;UBERON:0002193,7.21e-09,108;UBERON:0001434,1.08e-08,100;UBERON:0002405,1.70e-08,93 | |||
|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,0,0.446961094427288,0,2.53299878168311,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0.434021741431704,0.895661896959697,1.6194683300949,0.515151135268373,0.872389432677388,0.755751887377619,0.727752183563449,1.16214518452842,1.23350366406548,1.85823822537062,0,1.0246428261164,0.709446689665756,0.344745680736619,0.645484683583826,0,1.12945403725563,0.545812300115692,0.674170453335254,0.612167784741805,0.320929027076094,0.639337125799041,0,0.797854630486527,0.852449501065388,1.7412554317715,2.26954089876456,1.86846674698672,0.75374599577023,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,2.84816148696796,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0.590129310341499,0,0,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.130059347559878,0,0,0.579606171470105,0.444859689486181,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,1.50401373190767,0.289693037921647,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0.649094787309367,0.522389211897802,0.664789802594326,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,0,0.436094052142534,0.496971951695318,0.379891534993739,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0.538842688278752,0.326923806226917,0.454072282934794,0.576175924479999,0,0,0,0.149448680551801,0.23486899728753,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.226864366320042,0,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.276149695926898,0.484938170456436,0,0.201504196455281,0.169560592310488,0.193260853163297,0.545492241181669,0,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0.658501712451753,0,0.100528972411631,0,0.651616610620649,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0.335964256397719,0.141775097242386,0.268675568108545,0.581267877027924,0,0.985326475791887,1.67292024625129,2.28060927094849,3.17063897517315,3.1560608356595,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,1.00451418286425,2.10833939483032,0,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.591092280605782,0.862510299438069,0.513372145118994,2.28685161800217,0,0,0.167516265334349,0,2.99602809578873,0,2.07207756718018,0.49076596687656,0,0,0,0,0,0.35142424497814,0.300946099727719,0,0,0,0,0.521301686808497,0,0.343143423810856,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0.744323423456331,0,0.280660094433074,0.640695746278505,1.02341449813341,0,0,0,0.355123450626254,0.410635780069046,0.519254429183621,0.348631135379878,0.604297247958111,0.802025881213139,0.460404944679482,0,0,0.262248829918848,0,0.308061348417659,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0.784306353074702,0.256450125116389,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.661139661443912,0.192190067365106,0.127612712494584,0.6069466851333,0.464845549297286,0,0,0,0,0.869932992075073,0,0.429374660225974,0,0,0.38126038784765,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,1.05553817648832,0,0,0,0,0,0,0.0941438007767792,0.86101074534246,0,0,0,0,0,1.13929437434833,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,2.19762268907841,0,0.334330152832435,0,0,0.890894042497916,0,0.994147647766298,0.281338832821026,0,0.16480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|phase1_expression=0.726713517082227,0.214100523890983,0.422863212287913,0,0.446961094427288,0,2.53299878168311,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.157421562627358,0.786728553697808,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,0,0,0.434021741431704,0.895661896959697,1.6194683300949,0.515151135268373,0.872389432677388,0.755751887377619,0.727752183563449,1.16214518452842,1.23350366406548,1.85823822537062,0,1.0246428261164,0.709446689665756,0.344745680736619,0.645484683583826,0,1.12945403725563,0.545812300115692,0.674170453335254,0.612167784741805,0.320929027076094,0.639337125799041,0,0.797854630486527,0.852449501065388,1.7412554317715,2.26954089876456,1.86846674698672,0.75374599577023,0.521482918420201,0.434377689410233,0.605399502633369,0.736555271975129,2.84816148696796,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0,0.590129310341499,0,0,0.334372990781356,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0,0.25618263945135,0.130059347559878,0,0,0.579606171470105,0.444859689486181,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0,0,0,1.50401373190767,0.289693037921647,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0.364295288292542,0,0.649094787309367,0.522389211897802,0.664789802594326,0,0,0.371457501329565,0,0,0,0,0.419499436209906,0.550236083880135,0.208994966536811,0.258416759169329,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,0,0.436094052142534,0.496971951695318,0.379891534993739,0.132409180813219,0.573673241497627,0,0,0,0,0.311211035399766,0.538842688278752,0.326923806226917,0.454072282934794,0.576175924479999,0,0,0,0.149448680551801,0.23486899728753,0,0,0.408308342509787,0,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0.30648779579902,0.300476117813194,0.226864366320042,0,0,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0.292311015483596,0,0.276149695926898,0.484938170456436,0,0.201504196455281,0.169560592310488,0.193260853163297,0.545492241181669,0,0.121973706129595,0.132529768321485,0.232387885739037,0.207322110030741,0,0.72995471815166,0,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0.38474715694639,0,0,0,1.47008711385542,0,0.982827216677626,0.590789906681404,0,0.245976877086227,0,0.658501712451753,0,0.100528972411631,0,0.651616610620649,0,0,0,0,0.144366447761074,0,0,0,0,0.246217006087397,0,0.594524649154913,0,0.335964256397719,0.141775097242386,0.268675568108545,0.581267877027924,0,0.985326475791887,1.67292024625129,2.28060927094849,3.17063897517315,3.1560608356595,0,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0,0,0,0.845302752556,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.301439377059586,0,0.499864955910285,0,1.00451418286425,2.10833939483032,0,1.14861935834114,0,0.289562613335158,0,0.179060963239896,0.112085143993527,0.591092280605782,0.862510299438069,0.513372145118994,2.28685161800217,0,0,0.167516265334349,0,2.99602809578873,0,2.07207756718018,0.49076596687656,0,0,0,0,0,0.35142424497814,0.300946099727719,0,0,0,0,0.521301686808497,0,0.343143423810856,0.620304078368662,0.215714200818617,0.320182673410333,0,0,0,0.744323423456331,0,0.280660094433074,0.640695746278505,1.02341449813341,0,0,0,0.355123450626254,0.410635780069046,0.519254429183621,0.348631135379878,0.604297247958111,0.802025881213139,0.460404944679482,0,0,0.262248829918848,0,0.308061348417659,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0.784306353074702,0.256450125116389,0,0,0.206082023295445,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0.137836572484531,0,0.145016693914229,0.0852266274161009,0.0890320356467374,0.661139661443912,0.192190067365106,0.127612712494584,0.6069466851333,0.464845549297286,0,0,0,0,0.869932992075073,0,0.429374660225974,0,0,0.38126038784765,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0.272999822815972,0.424216295861138,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,1.05553817648832,0,0,0,0,0,0,0.0941438007767792,0.86101074534246,0,0,0,0,0,1.13929437434833,0,0,0.648473311192717,0,0,0.320472213382419,0,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0,0,0.324621940274555,0,0,0,0,0.169291777801603,0,0.403599414382095,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,2.19762268907841,0,0.334330152832435,0,0,0.890894042497916,0,0.994147647766298,0.281338832821026,0,0.16480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| ||
|short_description=p8@RAB5A | |short_description=p8@RAB5A | ||
}} | }} |
Revision as of 22:26, 18 November 2012
Short description: | p8@RAB5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RAB5A_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000476544_5end |
EntrezGene: | RAB5A |
HGNC: | 9783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.39e-15 | 72 |
mast cell | 3.97e-14 | 5 |
basophil mast progenitor cell | 3.97e-14 | 5 |
granulocyte monocyte progenitor cell | 3.13e-13 | 67 |
myeloid lineage restricted progenitor cell | 8.68e-12 | 66 |
myeloid cell | 3.94e-10 | 108 |
common myeloid progenitor | 3.94e-10 | 108 |
macrophage dendritic cell progenitor | 4.51e-08 | 61 |
leukocyte | 5.16e-08 | 136 |
defensive cell | 7.49e-08 | 48 |
phagocyte | 7.49e-08 | 48 |
endocrine cell | 7.55e-08 | 9 |
secretory cell | 1.40e-07 | 36 |
monopoietic cell | 4.41e-07 | 59 |
monocyte | 4.41e-07 | 59 |
monoblast | 4.41e-07 | 59 |
promonocyte | 4.41e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.20e-11 | 76 |
hematopoietic system | 3.35e-10 | 98 |
blood island | 3.35e-10 | 98 |
bone element | 3.97e-10 | 82 |
skeletal element | 6.69e-09 | 90 |
hemolymphoid system | 7.21e-09 | 108 |
skeletal system | 1.08e-08 | 100 |
immune system | 1.70e-08 | 93 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.