FFCP PHASE1:Hg19::chr13:110802649..110802660,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0005020!1.38e-08!6;CL:0002138!1.38e-08!6;CL:0005022!1.38e-08!6;CL:0000055!2.88e-07!180;CL:0000669!4.66e-07!5 | |ontology_enrichment_celltype=CL:0005020!1.38e-08!6;CL:0002138!1.38e-08!6;CL:0005022!1.38e-08!6;CL:0000055!2.88e-07!180;CL:0000669!4.66e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000669;5.79e-19;4!CL:0002575;3.51e-17;2!CL:0002138;7.79e-13;6!CL:0000222;3.00e-09;1!CL:0002557;3.00e-09;1 | |ontology_enrichment_celltype_v019=CL:0000669;5.79e-19;4!CL:0002575;3.51e-17;2!CL:0002138;7.79e-13;6!CL:0000222;3.00e-09;1!CL:0002557;3.00e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000669,5.47e-19,4;CL:0002575,2.65e-17,2;CL:0005020,1.03e-12,6;CL:0002138,1.03e-12,6;CL:0005022,1.03e-12,6;CL:0002557,4.87e-09,1 | |||
|ontology_enrichment_development_v019=CL:0005022;7.79e-13;6!UBERON:0000358;8.66e-10;1 | |ontology_enrichment_development_v019=CL:0005022;7.79e-13;6!UBERON:0000358;8.66e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;1.16e-09;1!DOID:2513;3.00e-09;1!DOID:4235;3.00e-09;1 | |ontology_enrichment_disease_v019=DOID:3571;1.16e-09;1!DOID:2513;3.00e-09;1!DOID:4235;3.00e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,9.44e-10,1;DOID:2513,1.56e-09,1;DOID:4235,1.69e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001473!5.52e-11!8;UBERON:0004536!5.52e-11!8;UBERON:0006558!5.52e-11!8;UBERON:0001009!2.89e-10!113;UBERON:0004535!3.41e-10!110;UBERON:0002049!5.53e-10!79;UBERON:0007798!5.53e-10!79;UBERON:0002465!2.56e-08!10;UBERON:0003887!4.98e-07!21 | |ontology_enrichment_uberon=UBERON:0001473!5.52e-11!8;UBERON:0004536!5.52e-11!8;UBERON:0006558!5.52e-11!8;UBERON:0001009!2.89e-10!113;UBERON:0004535!3.41e-10!110;UBERON:0002049!5.53e-10!79;UBERON:0007798!5.53e-10!79;UBERON:0002465!2.56e-08!10;UBERON:0003887!4.98e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;2.04e-16;8!UBERON:0004536;2.04e-16;8!UBERON:0006558;2.04e-16;8!UBERON:0002465;3.56e-13;10!UBERON:0002331;8.14e-08;10!UBERON:0005284;2.11e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0001473;2.04e-16;8!UBERON:0004536;2.04e-16;8!UBERON:0006558;2.04e-16;8!UBERON:0002465;3.56e-13;10!UBERON:0002331;8.14e-08;10!UBERON:0005284;2.11e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,2.13e-16,8;UBERON:0004536,2.13e-16,8;UBERON:0006558,2.13e-16,8;UBERON:0002465,3.68e-13,10;UBERON:0002331,8.74e-08,10;UBERON:0000358,8.74e-08,10;UBERON:0000307,8.74e-08,10;UBERON:0000091,8.74e-08,10;UBERON:0000087,8.74e-08,10;UBERON:0007010,8.74e-08,10;UBERON:0007806,8.74e-08,10;UBERON:0008780,8.74e-08,10;UBERON:0005728,8.74e-08,10;UBERON:0005284,1.95e-07,5;UBERON:0002049,5.44e-07,78;UBERON:0007798,5.44e-07,78 | |||
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| ||
|short_description=p12@COL4A1 | |short_description=p12@COL4A1 | ||
}} | }} |
Revision as of 17:42, 18 November 2012
Short description: | p12@COL4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_COL4A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 48bp_to_M10941_5end |
EntrezGene: | COL4A1 |
HGNC: | 2202 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 5.47e-19 | 4 |
central nervous system pericyte | 2.65e-17 | 2 |
lymphangioblast | 1.03e-12 | 6 |
endothelial cell of lymphatic vessel | 1.03e-12 | 6 |
vascular lymphangioblast | 1.03e-12 | 6 |
fibroblast of pulmonary artery | 4.87e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 2.13e-16 | 8 |
lymph vasculature | 2.13e-16 | 8 |
lymphatic part of lymphoid system | 2.13e-16 | 8 |
lymphoid system | 3.68e-13 | 10 |
umbilical cord | 8.74e-08 | 10 |
blastocyst | 8.74e-08 | 10 |
blastula | 8.74e-08 | 10 |
bilaminar disc | 8.74e-08 | 10 |
inner cell mass | 8.74e-08 | 10 |
cleaving embryo | 8.74e-08 | 10 |
connecting stalk | 8.74e-08 | 10 |
inner cell mass derived epiblast | 8.74e-08 | 10 |
extraembryonic mesoderm | 8.74e-08 | 10 |
brain vasculature | 1.95e-07 | 5 |
vasculature | 5.44e-07 | 78 |
vascular system | 5.44e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 9.44e-10 | 1 |
basal cell carcinoma | 1.56e-09 | 1 |
spindle cell sarcoma | 1.69e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.