FFCP PHASE1:Hg19::chr20:52224962..52224971,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000039!2.38e-49!7;CL:0000586!2.38e-49!7 | |ontology_enrichment_celltype=CL:0000039!2.38e-49!7;CL:0000586!2.38e-49!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.50e-75;7!CL:0000586;3.50e-75;7!CL:0000083;1.57e-09;4 | |ontology_enrichment_celltype_v019=CL:0000039;3.50e-75;7!CL:0000586;3.50e-75;7!CL:0000083;1.57e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.18e-75,7;CL:0000586,3.18e-75,7;CL:0000083,1.70e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.36e-14;10!UBERON:0005564;3.36e-14;10 | |ontology_enrichment_development_v019=UBERON:0009117;3.36e-14;10!UBERON:0005564;3.36e-14;10 | ||
|ontology_enrichment_disease=DOID:3095!1.45e-24!22;DOID:2994!1.45e-24!22;DOID:1799!1.41e-08!1;DOID:10165!1.41e-08!1;DOID:1798!1.41e-08!1;DOID:8552!2.33e-08!1;DOID:0050687!4.36e-08!143;DOID:162!5.63e-08!235;DOID:14566!9.92e-08!239;DOID:305!3.03e-07!106 | |ontology_enrichment_disease=DOID:3095!1.45e-24!22;DOID:2994!1.45e-24!22;DOID:1799!1.41e-08!1;DOID:10165!1.41e-08!1;DOID:1798!1.41e-08!1;DOID:8552!2.33e-08!1;DOID:0050687!4.36e-08!143;DOID:162!5.63e-08!235;DOID:14566!9.92e-08!239;DOID:305!3.03e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:1799;7.05e-34;1!DOID:10165;7.05e-34;1!DOID:1798;7.05e-34;1!DOID:3095;1.66e-24;22!DOID:2994;1.66e-24;22!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | |ontology_enrichment_disease_v019=DOID:1799;7.05e-34;1!DOID:10165;7.05e-34;1!DOID:1798;7.05e-34;1!DOID:3095;1.66e-24;22!DOID:2994;1.66e-24;22!DOID:1793;1.57e-09;4!DOID:170;8.97e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:1799,9.85e-34,1;DOID:10165,9.85e-34,1;DOID:1798,9.85e-34,1;DOID:3095,1.61e-24,22;DOID:2994,1.61e-24,22;DOID:1793,1.70e-09,4;DOID:170,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.45e-14!8;UBERON:0003135!1.25e-10!11 | |ontology_enrichment_uberon=UBERON:0000473!1.45e-14!8;UBERON:0003135!1.25e-10!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.78e-17;8!UBERON:0003135;5.26e-13;11!UBERON:0000945;5.92e-08;5!UBERON:0010039;5.92e-08;5!UBERON:0000991;2.82e-07;21!UBERON:0003101;5.49e-07;22!UBERON:0000079;5.49e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.78e-17;8!UBERON:0003135;5.26e-13;11!UBERON:0000945;5.92e-08;5!UBERON:0010039;5.92e-08;5!UBERON:0000991;2.82e-07;21!UBERON:0003101;5.49e-07;22!UBERON:0000079;5.49e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.85e-17,8;UBERON:0003135,5.42e-13,11;UBERON:0000991,2.86e-07,21;UBERON:0009196,2.86e-07,21;UBERON:0009117,2.86e-07,21;UBERON:0005564,2.86e-07,21;UBERON:0002323,3.63e-07,46;UBERON:0004176,5.57e-07,22;UBERON:0003101,5.57e-07,22;UBERON:0000079,5.57e-07,22;UBERON:0004458,9.10e-07,49 | |||
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|short_description=p@chr20:52224962..52224971,- | |short_description=p@chr20:52224962..52224971,- | ||
}} | }} |
Revision as of 11:53, 18 November 2012
Short description: | p@chr20:52224962..52224971, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:52224962..52224971, - |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.18e-75 | 7 |
germ cell | 3.18e-75 | 7 |
epithelial cell of pancreas | 1.70e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.85e-17 | 8 |
male reproductive organ | 5.42e-13 | 11 |
gonad | 2.86e-07 | 21 |
indifferent external genitalia | 2.86e-07 | 21 |
indifferent gonad | 2.86e-07 | 21 |
gonad primordium | 2.86e-07 | 21 |
body cavity | 3.63e-07 | 46 |
external genitalia | 5.57e-07 | 22 |
male organism | 5.57e-07 | 22 |
male reproductive system | 5.57e-07 | 22 |
body cavity or lining | 9.10e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.85e-34 | 1 |
endocrine pancreas cancer | 9.85e-34 | 1 |
pancreatic endocrine carcinoma | 9.85e-34 | 1 |
germ cell and embryonal cancer | 1.61e-24 | 22 |
germ cell cancer | 1.61e-24 | 22 |
pancreatic cancer | 1.70e-09 | 4 |
endocrine gland cancer | 9.49e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.