FFCP PHASE1:Hg19::chr19:1882553..1882574,-: Difference between revisions
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|ontology_enrichment_development_v019=CL:0000790;3.10e-59;18!CL:0000051;8.34e-15;53 | |ontology_enrichment_development_v019=CL:0000790;3.10e-59;18!CL:0000051;8.34e-15;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.08e-11,15;UBERON:0000179,4.08e-11,15;UBERON:0000463,4.08e-11,15 | |||
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| ||
|short_description=p3@FAM108A1 | |short_description=p3@FAM108A1 | ||
}} | }} |
Revision as of 11:52, 18 November 2012
Short description: | p3@FAM108A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM108A1_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 154bp_to_AK024419_5end |
EntrezGene: | FAM108A1 |
HGNC: | 28756 |
UniProt: | Q96GS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.41e-59 | 18 |
alpha-beta T cell | 3.41e-59 | 18 |
immature T cell | 3.41e-59 | 18 |
mature T cell | 3.41e-59 | 18 |
immature alpha-beta T cell | 3.41e-59 | 18 |
T cell | 2.51e-46 | 25 |
pro-T cell | 2.51e-46 | 25 |
CD8-positive, alpha-beta T cell | 2.35e-41 | 11 |
lymphoid lineage restricted progenitor cell | 4.28e-28 | 52 |
lymphocyte | 1.84e-27 | 53 |
common lymphoid progenitor | 1.84e-27 | 53 |
CD4-positive, alpha-beta T cell | 4.59e-23 | 6 |
leukocyte | 7.03e-18 | 136 |
nongranular leukocyte | 1.51e-17 | 115 |
hematopoietic stem cell | 4.08e-13 | 168 |
natural killer cell | 4.65e-13 | 3 |
pro-NK cell | 4.65e-13 | 3 |
naive T cell | 1.24e-12 | 3 |
hematopoietic lineage restricted progenitor cell | 1.90e-12 | 120 |
hematopoietic cell | 4.32e-12 | 177 |
single nucleate cell | 4.74e-12 | 3 |
mononuclear cell | 4.74e-12 | 3 |
hematopoietic oligopotent progenitor cell | 1.15e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-10 | 161 |
regulatory T cell | 5.01e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.01e-09 | 2 |
naive regulatory T cell | 5.01e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.08e-11 | 15 |
haemolymphatic fluid | 4.08e-11 | 15 |
organism substance | 4.08e-11 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.