FFCP PHASE1:Hg19::chr6:160148356..160148427,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0002057!8.60e-16!42;CL:0000860!3.90e-14!45;CL:0002194!3.16e-13!63;CL:0000576!3.16e-13!63;CL:0000040!3.16e-13!63;CL:0000559!3.16e-13!63;CL:0002009!4.35e-12!65;CL:0000557!3.59e-10!71;CL:0000839!9.03e-10!70;CL:0000766!9.05e-10!76;CL:0000048!2.25e-08!430;CL:0000723!6.11e-08!436;CL:0000034!1.68e-07!444 | |ontology_enrichment_celltype=CL:0002057!8.60e-16!42;CL:0000860!3.90e-14!45;CL:0002194!3.16e-13!63;CL:0000576!3.16e-13!63;CL:0000040!3.16e-13!63;CL:0000559!3.16e-13!63;CL:0002009!4.35e-12!65;CL:0000557!3.59e-10!71;CL:0000839!9.03e-10!70;CL:0000766!9.05e-10!76;CL:0000048!2.25e-08!430;CL:0000723!6.11e-08!436;CL:0000034!1.68e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.70e-14;33!CL:0002057;4.70e-14;33!CL:0000473;1.55e-12;39!CL:0000234;1.55e-12;39!CL:0000576;3.50e-10;48 | |ontology_enrichment_celltype_v019=CL:0000860;4.70e-14;33!CL:0002057;4.70e-14;33!CL:0000473;1.55e-12;39!CL:0000234;1.55e-12;39!CL:0000576;3.50e-10;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.40e-17,48;CL:0000234,9.40e-17,48;CL:0000860,8.60e-16,42;CL:0002057,8.60e-16,42;CL:0002194,2.25e-15,59;CL:0000576,2.25e-15,59;CL:0000040,2.25e-15,59;CL:0000559,2.25e-15,59;CL:0002009,4.71e-14,61;CL:0000557,8.47e-12,67;CL:0000839,2.29e-11,66;CL:0000766,2.81e-11,72;CL:0000048,5.75e-09,427;CL:0000723,1.64e-08,433;CL:0000034,4.70e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.67e-12;42 | |ontology_enrichment_development_v019=CL:0002057;5.67e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!2.93e-13!167;UBERON:0001474!1.32e-11!86;UBERON:0002405!2.67e-11!115;UBERON:0002371!2.92e-11!80;UBERON:0004765!2.15e-10!101;UBERON:0001434!2.15e-10!101;UBERON:0000468!7.10e-10!659;UBERON:0000467!1.64e-09!625;UBERON:0000480!2.92e-09!626;UBERON:0000062!4.94e-08!511;UBERON:0000926!1.25e-07!448;UBERON:0004120!1.25e-07!448;UBERON:0006603!1.25e-07!448;UBERON:0002050!1.26e-07!605;UBERON:0005423!1.26e-07!605;UBERON:0000923!1.42e-07!604;UBERON:0005291!1.42e-07!604;UBERON:0006598!1.42e-07!604;UBERON:0002532!1.42e-07!604;UBERON:0000922!2.34e-07!612;UBERON:0002193!4.55e-07!112 | |ontology_enrichment_uberon=UBERON:0002204!2.93e-13!167;UBERON:0001474!1.32e-11!86;UBERON:0002405!2.67e-11!115;UBERON:0002371!2.92e-11!80;UBERON:0004765!2.15e-10!101;UBERON:0001434!2.15e-10!101;UBERON:0000468!7.10e-10!659;UBERON:0000467!1.64e-09!625;UBERON:0000480!2.92e-09!626;UBERON:0000062!4.94e-08!511;UBERON:0000926!1.25e-07!448;UBERON:0004120!1.25e-07!448;UBERON:0006603!1.25e-07!448;UBERON:0002050!1.26e-07!605;UBERON:0005423!1.26e-07!605;UBERON:0000923!1.42e-07!604;UBERON:0005291!1.42e-07!604;UBERON:0006598!1.42e-07!604;UBERON:0002532!1.42e-07!604;UBERON:0000922!2.34e-07!612;UBERON:0002193!4.55e-07!112 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.56e-15,167;UBERON:0001474,3.55e-13,82;UBERON:0002371,7.09e-13,76;UBERON:0001434,6.38e-12,100;UBERON:0004765,1.48e-11,90;UBERON:0002405,1.53e-11,93;UBERON:0000926,5.03e-11,315;UBERON:0004120,5.03e-11,315;UBERON:0006603,5.03e-11,315;UBERON:0002193,5.29e-08,108;UBERON:0005423,8.33e-08,581;UBERON:0000923,1.02e-07,560;UBERON:0010316,1.02e-07,560;UBERON:0005291,1.02e-07,560;UBERON:0006598,1.02e-07,560;UBERON:0010317,1.02e-07,560;UBERON:0002532,1.02e-07,560;UBERON:0003081,1.26e-07,203;UBERON:0002050,4.20e-07,564;UBERON:0003104,7.16e-07,160;UBERON:0009142,7.16e-07,160 | |||
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| ||
|short_description=p3@SOD2 | |short_description=p3@SOD2 | ||
}} | }} |
Revision as of 11:14, 18 November 2012
Short description: | p3@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SOD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000401980, ENST00000545162_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | F5GYZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.40e-17 | 48 |
phagocyte | 9.40e-17 | 48 |
classical monocyte | 8.60e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.60e-16 | 42 |
monopoietic cell | 2.25e-15 | 59 |
monocyte | 2.25e-15 | 59 |
monoblast | 2.25e-15 | 59 |
promonocyte | 2.25e-15 | 59 |
macrophage dendritic cell progenitor | 4.71e-14 | 61 |
granulocyte monocyte progenitor cell | 8.47e-12 | 67 |
myeloid lineage restricted progenitor cell | 2.29e-11 | 66 |
myeloid leukocyte | 2.81e-11 | 72 |
multi fate stem cell | 5.75e-09 | 427 |
somatic stem cell | 1.64e-08 | 433 |
stem cell | 4.70e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.56e-15 | 167 |
bone element | 3.55e-13 | 82 |
bone marrow | 7.09e-13 | 76 |
skeletal system | 6.38e-12 | 100 |
skeletal element | 1.48e-11 | 90 |
immune system | 1.53e-11 | 93 |
mesoderm | 5.03e-11 | 315 |
mesoderm-derived structure | 5.03e-11 | 315 |
presumptive mesoderm | 5.03e-11 | 315 |
hemolymphoid system | 5.29e-08 | 108 |
developing anatomical structure | 8.33e-08 | 581 |
germ layer | 1.02e-07 | 560 |
germ layer / neural crest | 1.02e-07 | 560 |
embryonic tissue | 1.02e-07 | 560 |
presumptive structure | 1.02e-07 | 560 |
germ layer / neural crest derived structure | 1.02e-07 | 560 |
epiblast (generic) | 1.02e-07 | 560 |
lateral plate mesoderm | 1.26e-07 | 203 |
embryonic structure | 4.20e-07 | 564 |
mesenchyme | 7.16e-07 | 160 |
entire embryonic mesenchyme | 7.16e-07 | 160 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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