FFCP PHASE1:Hg19::chr1:18958059..18958081,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0002322!4.81e-33!5 | |ontology_enrichment_celltype=CL:0002322!4.81e-33!5 | ||
|ontology_enrichment_celltype_v019=CL:0000214;1.35e-09;3 | |ontology_enrichment_celltype_v019=CL:0000214;1.35e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.30e-09,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:171!3.25e-17!10;DOID:3095!1.10e-10!22;DOID:2994!1.10e-10!22;DOID:0050619!4.11e-08!1;DOID:1357!4.11e-08!1 | |ontology_enrichment_disease=DOID:171!3.25e-17!10;DOID:3095!1.10e-10!22;DOID:2994!1.10e-10!22;DOID:0050619!4.11e-08!1;DOID:1357!4.11e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:171;6.42e-40;10!DOID:3095;1.74e-18;22!DOID:2994;1.74e-18;22!DOID:3193;6.43e-14;2!DOID:962;6.43e-14;2!DOID:1115;6.03e-12;20!DOID:1192;1.01e-09;3 | |ontology_enrichment_disease_v019=DOID:171;6.42e-40;10!DOID:3095;1.74e-18;22!DOID:2994;1.74e-18;22!DOID:3193;6.43e-14;2!DOID:962;6.43e-14;2!DOID:1115;6.03e-12;20!DOID:1192;1.01e-09;3 | ||
|ontology_enrichment_disease_v019_2=DOID:171,6.42e-40,10;DOID:3095,1.74e-18,22;DOID:2994,1.74e-18,22;DOID:3193,6.43e-14,2;DOID:962,6.43e-14,2;DOID:1115,5.92e-12,20;DOID:1192,1.01e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001764!4.11e-08!1;UBERON:0001825!4.11e-08!1 | |ontology_enrichment_uberon=UBERON:0001764!4.11e-08!1;UBERON:0001825!4.11e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.06e-56;4!UBERON:0000923;8.06e-56;4!UBERON:0010316;8.06e-56;4!UBERON:0005291;8.06e-56;4!UBERON:0002050;7.36e-45;5!UBERON:0005423;7.36e-45;5!UBERON:0003714;6.43e-14;2!UBERON:0006915;1.35e-09;3!UBERON:0007616;1.35e-09;3!UBERON:0002217;1.35e-09;3!UBERON:0002018;1.35e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0002346;8.06e-56;4!UBERON:0000923;8.06e-56;4!UBERON:0010316;8.06e-56;4!UBERON:0005291;8.06e-56;4!UBERON:0002050;7.36e-45;5!UBERON:0005423;7.36e-45;5!UBERON:0003714;6.43e-14;2!UBERON:0006915;1.35e-09;3!UBERON:0007616;1.35e-09;3!UBERON:0002217;1.35e-09;3!UBERON:0002018;1.35e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,6.43e-14,2;UBERON:0006915,1.30e-09,3;UBERON:0007616,1.30e-09,3;UBERON:0002217,1.30e-09,3;UBERON:0002018,1.30e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61956866820698,1.91317428091515,3.22232987073406,11.1728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.21448843203671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,3.47097436825006,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0,0,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61956866820698,1.91317428091515,3.22232987073406,11.1728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.21448843203671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,2.3196288626764,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,3.47097436825006,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@PAX7 | |short_description=p6@PAX7 | ||
}} | }} |
Revision as of 01:24, 18 November 2012
Short description: | p6@PAX7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PAX7_5end |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | 41bp_to_ENST00000400661_5end |
EntrezGene: | PAX7 |
HGNC: | 8621 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 6.43e-14 | 2 |
stratified squamous epithelium | 1.30e-09 | 3 |
layer of synovial tissue | 1.30e-09 | 3 |
synovial joint | 1.30e-09 | 3 |
synovial membrane of synovial joint | 1.30e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.42e-40 | 10 |
germ cell and embryonal cancer | 1.74e-18 | 22 |
germ cell cancer | 1.74e-18 | 22 |
peripheral nerve sheath neoplasm | 6.43e-14 | 2 |
neurofibroma | 6.43e-14 | 2 |
sarcoma | 5.92e-12 | 20 |
peripheral nervous system neoplasm | 1.01e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.