FFCP PHASE1:Hg19::chr14:69445991..69446029,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000220!2.43e-19!246;CL:0002321!3.20e-19!248;CL:0000055!1.40e-18!180;CL:0000222!3.93e-18!119;CL:0000144!4.84e-16!625;CL:0002371!1.40e-15!591;CL:0000548!1.43e-13!679;CL:0000004!1.43e-13!679;CL:0000255!1.43e-13!679;CL:0000012!9.97e-13!682;CL:0000183!4.39e-12!59;CL:0000192!8.45e-12!42;CL:0000514!8.45e-12!42;CL:0000680!2.68e-11!57;CL:0000056!2.68e-11!57;CL:0000355!2.68e-11!57;CL:0000187!3.17e-11!54;CL:0000359!6.93e-10!32;CL:0000057!8.12e-10!75;CL:0000393!5.84e-09!60;CL:0000211!5.84e-09!60;CL:1000449!1.69e-07!16;CL:0000066!1.96e-07!254;CL:0000003!6.28e-07!722;CL:0000115!8.81e-07!35 | |ontology_enrichment_celltype=CL:0000220!2.43e-19!246;CL:0002321!3.20e-19!248;CL:0000055!1.40e-18!180;CL:0000222!3.93e-18!119;CL:0000144!4.84e-16!625;CL:0002371!1.40e-15!591;CL:0000548!1.43e-13!679;CL:0000004!1.43e-13!679;CL:0000255!1.43e-13!679;CL:0000012!9.97e-13!682;CL:0000183!4.39e-12!59;CL:0000192!8.45e-12!42;CL:0000514!8.45e-12!42;CL:0000680!2.68e-11!57;CL:0000056!2.68e-11!57;CL:0000355!2.68e-11!57;CL:0000187!3.17e-11!54;CL:0000359!6.93e-10!32;CL:0000057!8.12e-10!75;CL:0000393!5.84e-09!60;CL:0000211!5.84e-09!60;CL:1000449!1.69e-07!16;CL:0000066!1.96e-07!254;CL:0000003!6.28e-07!722;CL:0000115!8.81e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.52e-09;32!CL:0000192;8.61e-09;43!CL:1000449;2.15e-07;15!CL:0000187;5.19e-07;55 | |ontology_enrichment_celltype_v019=CL:0000359;2.52e-09;32!CL:0000192;8.61e-09;43!CL:1000449;2.15e-07;15!CL:0000187;5.19e-07;55 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.32e-19,250;CL:0000222,1.69e-18,121;CL:0000192,5.91e-12,43;CL:0000514,5.91e-12,43;CL:0000680,1.83e-11,58;CL:0000056,1.83e-11,58;CL:0000355,1.83e-11,58;CL:0000187,2.16e-11,55;CL:0000057,2.77e-10,76;CL:0000359,6.93e-10,32;CL:0000393,4.00e-09,61;CL:0000211,4.00e-09,61;CL:1000449,2.16e-07,15;CL:0000066,2.60e-07,253;CL:0000115,6.19e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;8.61e-09;43 | |ontology_enrichment_development_v019=CL:0000514;8.61e-09;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@ACTN1 | |short_description=p1@ACTN1 | ||
}} | }} |
Revision as of 00:20, 18 November 2012
Short description: | p1@ACTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ACTN1_5end |
Coexpression cluster: | C2309_hepatic_Fibroblast_Hepatic_Smooth_Urothelial_aorta_Olfactory |
Association with transcript: | -12bp_to_ENST00000438964_5end |
EntrezGene: | ACTN1 |
HGNC: | 163 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.32e-19 | 250 |
mesodermal cell | 1.69e-18 | 121 |
smooth muscle cell | 5.91e-12 | 43 |
smooth muscle myoblast | 5.91e-12 | 43 |
muscle precursor cell | 1.83e-11 | 58 |
myoblast | 1.83e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.83e-11 | 58 |
muscle cell | 2.16e-11 | 55 |
fibroblast | 2.77e-10 | 76 |
vascular associated smooth muscle cell | 6.93e-10 | 32 |
electrically responsive cell | 4.00e-09 | 61 |
electrically active cell | 4.00e-09 | 61 |
epithelial cell of nephron | 2.16e-07 | 15 |
epithelial cell | 2.60e-07 | 253 |
endothelial cell | 6.19e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.