FFCP PHASE1:Hg19::chr19:18899114..18899135,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000153!2.07e-26!9;CL:0000447!2.07e-26!9;CL:0000136!1.42e-24!15;CL:0000327!1.73e-16!14;CL:0000667!2.54e-16!6;CL:0000058!2.54e-16!6;CL:0000138!2.54e-16!6;CL:0002334!1.81e-15!12;CL:0000499!2.45e-15!27;CL:0000057!1.16e-13!75;CL:0000135!5.23e-13!3;CL:0000386!5.23e-13!3;CL:0000388!5.23e-13!3;CL:0002580!5.66e-13!3;CL:0002615!7.17e-13!3;CL:0002579!2.30e-12!3;CL:0000214!5.51e-12!3;CL:0002620!4.18e-11!23;CL:0002617!2.09e-09!2;CL:0000325!3.44e-08!39;CL:0000055!4.20e-07!180;CL:0000134!9.59e-07!358 | |ontology_enrichment_celltype=CL:0000153!2.07e-26!9;CL:0000447!2.07e-26!9;CL:0000136!1.42e-24!15;CL:0000327!1.73e-16!14;CL:0000667!2.54e-16!6;CL:0000058!2.54e-16!6;CL:0000138!2.54e-16!6;CL:0002334!1.81e-15!12;CL:0000499!2.45e-15!27;CL:0000057!1.16e-13!75;CL:0000135!5.23e-13!3;CL:0000386!5.23e-13!3;CL:0000388!5.23e-13!3;CL:0002580!5.66e-13!3;CL:0002615!7.17e-13!3;CL:0002579!2.30e-12!3;CL:0000214!5.51e-12!3;CL:0002620!4.18e-11!23;CL:0002617!2.09e-09!2;CL:0000325!3.44e-08!39;CL:0000055!4.20e-07!180;CL:0000134!9.59e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.45e-30;12!CL:0000153;5.06e-30;9!CL:0000447;5.06e-30;9!CL:0000136;1.13e-28;13!CL:0000135;2.86e-24;3!CL:0000388;2.86e-24;3!CL:0002580;3.22e-24;3!CL:0002615;4.95e-24;3!CL:0002579;4.67e-23;3!CL:0000499;6.34e-21;28!CL:0000138;1.12e-20;6!CL:0000327;7.34e-18;15!CL:0002617;4.02e-17;2!CL:0000214;4.54e-11;3!CL:0002581;3.88e-09;1!CL:0002616;3.88e-09;1 | |ontology_enrichment_celltype_v019=CL:0002334;1.45e-30;12!CL:0000153;5.06e-30;9!CL:0000447;5.06e-30;9!CL:0000136;1.13e-28;13!CL:0000135;2.86e-24;3!CL:0000388;2.86e-24;3!CL:0002580;3.22e-24;3!CL:0002615;4.95e-24;3!CL:0002579;4.67e-23;3!CL:0000499;6.34e-21;28!CL:0000138;1.12e-20;6!CL:0000327;7.34e-18;15!CL:0002617;4.02e-17;2!CL:0000214;4.54e-11;3!CL:0002581;3.88e-09;1!CL:0002616;3.88e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.63e-32,15;CL:0002334,1.48e-30,12;CL:0000153,5.46e-30,9;CL:0000447,5.46e-30,9;CL:0000135,2.64e-24,3;CL:0000388,2.64e-24,3;CL:0002580,3.09e-24,3;CL:0002615,4.95e-24,3;CL:0002579,5.04e-23,3;CL:0000499,6.42e-21,28;CL:0000058,1.06e-20,6;CL:0000138,1.06e-20,6;CL:0000327,7.68e-18,15;CL:0002617,3.87e-17,2;CL:0000214,5.16e-11,3;CL:0000134,1.41e-09,354;CL:0002320,2.60e-09,361;CL:0002581,3.88e-09,1;CL:0002616,4.19e-09,1;CL:0000057,1.47e-08,76;CL:0000219,2.28e-08,386;CL:0000048,3.27e-07,427;CL:0000151,3.71e-07,36;CL:0000723,4.73e-07,433;CL:0000034,7.61e-07,441 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.55e-09;1 | |ontology_enrichment_development_v019=UBERON:0004874;7.55e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!7.29e-25!12;UBERON:0000042!7.29e-25!12;UBERON:0003688!1.76e-23!6;UBERON:0002358!1.76e-23!6;UBERON:0003684!1.76e-23!6;UBERON:0001178!1.76e-23!6;UBERON:0000043!5.23e-13!3;UBERON:0006915!5.51e-12!3;UBERON:0002018!5.51e-12!3;UBERON:0002217!5.51e-12!3;UBERON:0007616!5.51e-12!3;UBERON:0000310!3.89e-10!10;UBERON:0001013!2.17e-09!14;UBERON:0001443!3.53e-09!11;UBERON:0005406!4.28e-09!2;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45;UBERON:0004905!2.33e-07!5;UBERON:0000982!2.33e-07!5;UBERON:0004770!2.33e-07!5 | |ontology_enrichment_uberon=UBERON:0004457!7.29e-25!12;UBERON:0000042!7.29e-25!12;UBERON:0003688!1.76e-23!6;UBERON:0002358!1.76e-23!6;UBERON:0003684!1.76e-23!6;UBERON:0001178!1.76e-23!6;UBERON:0000043!5.23e-13!3;UBERON:0006915!5.51e-12!3;UBERON:0002018!5.51e-12!3;UBERON:0002217!5.51e-12!3;UBERON:0007616!5.51e-12!3;UBERON:0000310!3.89e-10!10;UBERON:0001013!2.17e-09!14;UBERON:0001443!3.53e-09!11;UBERON:0005406!4.28e-09!2;UBERON:0002199!1.40e-07!45;UBERON:0002416!1.40e-07!45;UBERON:0004905!2.33e-07!5;UBERON:0000982!2.33e-07!5;UBERON:0004770!2.33e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.50e-53;9!UBERON:0000042;6.50e-53;9!UBERON:0003688;2.87e-45;6!UBERON:0002358;2.87e-45;6!UBERON:0003684;2.87e-45;6!UBERON:0001178;2.87e-45;6!UBERON:0007846;2.86e-24;3!UBERON:0000043;2.86e-24;3!UBERON:0007845;2.86e-24;3!UBERON:0000310;9.88e-20;10!UBERON:0001443;6.30e-18;11!UBERON:0005406;1.48e-16;2!UBERON:0006915;4.54e-11;3!UBERON:0007616;4.54e-11;3!UBERON:0002217;4.54e-11;3!UBERON:0002018;4.54e-11;3!UBERON:0001013;6.70e-09;14!UBERON:0000989;7.55e-09;1!UBERON:0008811;7.55e-09;1!UBERON:0004458;1.11e-07;48 | |ontology_enrichment_uberon_v019=UBERON:0004457;6.50e-53;9!UBERON:0000042;6.50e-53;9!UBERON:0003688;2.87e-45;6!UBERON:0002358;2.87e-45;6!UBERON:0003684;2.87e-45;6!UBERON:0001178;2.87e-45;6!UBERON:0007846;2.86e-24;3!UBERON:0000043;2.86e-24;3!UBERON:0007845;2.86e-24;3!UBERON:0000310;9.88e-20;10!UBERON:0001443;6.30e-18;11!UBERON:0005406;1.48e-16;2!UBERON:0006915;4.54e-11;3!UBERON:0007616;4.54e-11;3!UBERON:0002217;4.54e-11;3!UBERON:0002018;4.54e-11;3!UBERON:0001013;6.70e-09;14!UBERON:0000989;7.55e-09;1!UBERON:0008811;7.55e-09;1!UBERON:0004458;1.11e-07;48 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.10e-45,6;UBERON:0002358,3.10e-45,6;UBERON:0003684,3.10e-45,6;UBERON:0001178,3.10e-45,6;UBERON:0004457,2.20e-39,12;UBERON:0000042,2.20e-39,12;UBERON:0007846,2.64e-24,3;UBERON:0000043,2.64e-24,3;UBERON:0007845,2.64e-24,3;UBERON:0000310,9.51e-20,10;UBERON:0001443,6.08e-18,11;UBERON:0005406,1.60e-16,2;UBERON:0006915,5.16e-11,3;UBERON:0007616,5.16e-11,3;UBERON:0002217,5.16e-11,3;UBERON:0002018,5.16e-11,3;UBERON:0002384,6.03e-09,371;UBERON:0001013,6.85e-09,14;UBERON:0004458,7.15e-09,49;UBERON:0000989,7.27e-09,1;UBERON:0008811,7.27e-09,1;UBERON:0006258,7.27e-09,1;UBERON:0005876,7.27e-09,1;UBERON:0004874,7.27e-09,1 | |||
|phase1_expression=10.1739892391512,15.6293382440418,3.52386010239928,21.0153926541574,4.02264984984559,5.23403114460221,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,5.93870727739377,2.3858578411533,11.6792368872633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.37223371266318,0.506328996723799,0.779496041289589,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82222512167955,0,0,0,0,0,0,0,0,0,0,0,0,3.72161711728165,6.29194090481056,15.436305193819,1.53766979106841,3.07024349440022,2.0911009748669,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06658324714394,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,5.95192029066802,7.39481005810269,6.05677186973305,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=10.1739892391512,15.6293382440418,3.52386010239928,21.0153926541574,4.02264984984559,5.23403114460221,2.53299878168311,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44575660953827,0.50133791063589,5.93870727739377,2.3858578411533,11.6792368872633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.103052529238439,0,0.37223371266318,0.506328996723799,0.779496041289589,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82222512167955,0,0,0,0,0,0,0,0,0,0,0,0,3.72161711728165,6.29194090481056,15.436305193819,1.53766979106841,3.07024349440022,2.0911009748669,5.93672265779964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06658324714394,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48105589194647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,5.95192029066802,7.39481005810269,6.05677186973305,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:18899114..18899135,- | |short_description=p@chr19:18899114..18899135,- | ||
}} | }} |
Revision as of 22:28, 17 November 2012
Short description: | p@chr19:18899114..18899135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:18899114..18899135, - |
Coexpression cluster: | C240_Adipocyte_Preadipocyte_Osteoblast_Chondrocyte_tenocyte_Synoviocyte_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.63e-32 | 15 |
preadipocyte | 1.48e-30 | 12 |
GAG secreting cell | 5.46e-30 | 9 |
carbohydrate secreting cell | 5.46e-30 | 9 |
fibrocyte | 2.64e-24 | 3 |
tendon cell | 2.64e-24 | 3 |
preadipocyte of the breast | 3.09e-24 | 3 |
adipocyte of omentum tissue | 4.95e-24 | 3 |
omentum preadipocyte | 5.04e-23 | 3 |
stromal cell | 6.42e-21 | 28 |
chondroblast | 1.06e-20 | 6 |
chondrocyte | 1.06e-20 | 6 |
extracellular matrix secreting cell | 7.68e-18 | 15 |
adipocyte of breast | 3.87e-17 | 2 |
synovial cell | 5.16e-11 | 3 |
mesenchymal cell | 1.41e-09 | 354 |
connective tissue cell | 2.60e-09 | 361 |
perirenal preadipocyte | 3.88e-09 | 1 |
perirenal adipocyte cell | 4.19e-09 | 1 |
fibroblast | 1.47e-08 | 76 |
motile cell | 2.28e-08 | 386 |
multi fate stem cell | 3.27e-07 | 427 |
secretory cell | 3.71e-07 | 36 |
somatic stem cell | 4.73e-07 | 433 |
stem cell | 7.61e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.10e-45 | 6 |
peritoneum | 3.10e-45 | 6 |
abdominal cavity | 3.10e-45 | 6 |
visceral peritoneum | 3.10e-45 | 6 |
cavity lining | 2.20e-39 | 12 |
serous membrane | 2.20e-39 | 12 |
dense regular connective tissue | 2.64e-24 | 3 |
tendon | 2.64e-24 | 3 |
regular connective tissue | 2.64e-24 | 3 |
breast | 9.51e-20 | 10 |
chest | 6.08e-18 | 11 |
perirenal fat | 1.60e-16 | 2 |
stratified squamous epithelium | 5.16e-11 | 3 |
layer of synovial tissue | 5.16e-11 | 3 |
synovial joint | 5.16e-11 | 3 |
synovial membrane of synovial joint | 5.16e-11 | 3 |
connective tissue | 6.03e-09 | 371 |
adipose tissue | 6.85e-09 | 14 |
body cavity or lining | 7.15e-09 | 49 |
penis | 7.27e-09 | 1 |
intromittent organ | 7.27e-09 | 1 |
lateral plate mesenchyme | 7.27e-09 | 1 |
undifferentiated genital tubercle | 7.27e-09 | 1 |
somatopleure | 7.27e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.