FFCP PHASE1:Hg19::chr3:98255434..98255449,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000838!4.73e-12!52;CL:0000542!9.64e-12!53;CL:0000051!9.64e-12!53;CL:0000453!2.11e-09!5;CL:0002619!7.25e-09!3;CL:0000945!1.11e-08!24;CL:0000826!1.11e-08!24;CL:0000738!1.47e-08!140;CL:0002087!1.58e-07!119;CL:0002031!4.66e-07!124;CL:0000785!5.38e-07!2;CL:0000955!5.38e-07!2;CL:0000818!5.38e-07!2;CL:0000954!5.38e-07!2;CL:0000816!5.38e-07!2 | |ontology_enrichment_celltype=CL:0000838!4.73e-12!52;CL:0000542!9.64e-12!53;CL:0000051!9.64e-12!53;CL:0000453!2.11e-09!5;CL:0002619!7.25e-09!3;CL:0000945!1.11e-08!24;CL:0000826!1.11e-08!24;CL:0000738!1.47e-08!140;CL:0002087!1.58e-07!119;CL:0002031!4.66e-07!124;CL:0000785!5.38e-07!2;CL:0000955!5.38e-07!2;CL:0000818!5.38e-07!2;CL:0000954!5.38e-07!2;CL:0000816!5.38e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.27e-12;24!CL:0000946;4.28e-08;1!CL:0000786;4.28e-08;1!CL:0002127;5.96e-08;1!CL:0000911;5.96e-08;1!CL:0000814;5.96e-08;1 | |ontology_enrichment_celltype_v019=CL:0000945;1.27e-12;24!CL:0000946;4.28e-08;1!CL:0000786;4.28e-08;1!CL:0002127;5.96e-08;1!CL:0000911;5.96e-08;1!CL:0000814;5.96e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.38e-13,52;CL:0000542,1.03e-12,53;CL:0000051,1.03e-12,53;CL:0000945,1.27e-12,24;CL:0000826,1.27e-12,24;CL:0000946,4.28e-08,1;CL:0000786,4.28e-08,1;CL:0000980,4.28e-08,1;CL:0002127,5.96e-08,1;CL:0000914,5.96e-08,1;CL:0000911,5.96e-08,1;CL:0000814,5.96e-08,1;CL:0002042,5.96e-08,1;CL:0002039,5.96e-08,1;CL:0002040,5.96e-08,1;CL:0002041,5.96e-08,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060058!2.36e-07!10;DOID:4468!5.88e-07!2 | |ontology_enrichment_disease=DOID:0060058!2.36e-07!10;DOID:4468!5.88e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.63e-13;2!DOID:0060058;1.96e-10;10!DOID:630;5.58e-08;1!DOID:0050177;5.58e-08;1!DOID:0050427;5.58e-08;1!DOID:0060060;1.30e-07;1!DOID:0060061;1.30e-07;1!DOID:8691;1.30e-07;1 | |ontology_enrichment_disease_v019=DOID:4468;2.63e-13;2!DOID:0060058;1.96e-10;10!DOID:630;5.58e-08;1!DOID:0050177;5.58e-08;1!DOID:0050427;5.58e-08;1!DOID:0060060;1.30e-07;1!DOID:0060061;1.30e-07;1!DOID:8691;1.30e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,2.71e-13,2;DOID:0060058,1.82e-10,10;DOID:630,5.58e-08,1;DOID:0050177,5.58e-08,1;DOID:0050427,5.58e-08,1;DOID:0060060,1.30e-07,1;DOID:0060061,1.30e-07,1;DOID:8691,1.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.43e-09!7;UBERON:0002394!6.31e-07!4;UBERON:0003928!6.31e-07!4 | |ontology_enrichment_uberon=UBERON:0004177!1.43e-09!7;UBERON:0002394!6.31e-07!4;UBERON:0003928!6.31e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.62e-07;1!UBERON:0001961;2.62e-07;1!UBERON:0001744;2.62e-07;1!UBERON:0001042;2.62e-07;1!UBERON:0001735;2.62e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;2.62e-07;1!UBERON:0001961;2.62e-07;1!UBERON:0001744;2.62e-07;1!UBERON:0001042;2.62e-07;1!UBERON:0001735;2.62e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.47e-07,1;UBERON:0001961,2.47e-07,1;UBERON:0001744,2.47e-07,1;UBERON:0001735,2.47e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5419546956456,25.4511827294832,23.2196804875354,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,8.69369776031526,0,0,0,24.398890057853,0.294605907474837,0,0.270803863765016,12.8091319725675,20.0291395242213,11.675091226861,11.6067007470056,10.1431080007268,0,0,0,11.2176249270591,0,0,0.253019692019503,0,0.651083453856419,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9793312219223,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00119938235739,0.784349769176855,0,1.05551628892876,0,0,0,0,0,0,0.254876273045038,0,2.23874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81284261649436,0,0,0.828851746593443,0,0,65.8503709216722,0,8.3577566567014,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,2.10998064528027,6.36607951820676,0,0,0,0,0,1.18608451472249,0.370691816839509,0,0,0,0,0.729819156862664,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,6.04640914842423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,52.0054395086426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.797189041880179,1.63565394255844,0,0,0,8.59945802176198,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,80.2028553388224,0,0,0,0,0,0,0,0.560544326627578,0,0.215927591218621,0.47775168788705,0,0,3.25475991030751,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,68.859456432276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,1.34704106029175,0,0,0,0,0,0,0,0,0,0,0,36.2242396302653 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.5419546956456,25.4511827294832,23.2196804875354,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0.971680998056939,0.77272670290256,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,8.69369776031526,0,0,0,24.398890057853,0.294605907474837,0,0.270803863765016,12.8091319725675,20.0291395242213,11.675091226861,11.6067007470056,10.1431080007268,0,0,0,11.2176249270591,0,0,0.253019692019503,0,0.651083453856419,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9793312219223,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00119938235739,0.784349769176855,0,1.05551628892876,0,0,0,0,0,0,0.254876273045038,0,2.23874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81284261649436,0,0,0.828851746593443,0,0,65.8503709216722,0,8.3577566567014,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,2.10998064528027,6.36607951820676,0,0,0,0,0,1.18608451472249,0.370691816839509,0,0,0,0,0.729819156862664,0,0,0,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,6.04640914842423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,52.0054395086426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.797189041880179,1.63565394255844,0,0,0,8.59945802176198,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.288292572803,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,80.2028553388224,0,0,0,0,0,0,0,0.560544326627578,0,0.215927591218621,0.47775168788705,0,0,3.25475991030751,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,68.859456432276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,1.34704106029175,0,0,0,0,0,0,0,0,0,0,0,36.2242396302653 | ||
|short_description=p@chr3:98255434..98255449,- | |short_description=p@chr3:98255434..98255449,- | ||
}} | }} |
Revision as of 19:56, 17 November 2012
Short description: | p@chr3:98255434..98255449, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:98255434..98255449, - |
Coexpression cluster: | C631_b_plasma_xeroderma_lymphoma_splenic_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.38e-13 | 52 |
lymphocyte | 1.03e-12 | 53 |
common lymphoid progenitor | 1.03e-12 | 53 |
lymphocyte of B lineage | 1.27e-12 | 24 |
pro-B cell | 1.27e-12 | 24 |
antibody secreting cell | 4.28e-08 | 1 |
plasma cell | 4.28e-08 | 1 |
plasmablast | 4.28e-08 | 1 |
innate effector T cell | 5.96e-08 | 1 |
immature NK T cell | 5.96e-08 | 1 |
effector T cell | 5.96e-08 | 1 |
mature NK T cell | 5.96e-08 | 1 |
immature NK T cell stage IV | 5.96e-08 | 1 |
immature NK T cell stage I | 5.96e-08 | 1 |
immature NK T cell stage II | 5.96e-08 | 1 |
immature NK T cell stage III | 5.96e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.47e-07 | 1 |
mucosa-associated lymphoid tissue | 2.47e-07 | 1 |
lymphoid tissue | 2.47e-07 | 1 |
tonsillar ring | 2.47e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.71e-13 | 2 |
lymphoma | 1.82e-10 | 10 |
genetic disease | 5.58e-08 | 1 |
monogenic disease | 5.58e-08 | 1 |
xeroderma pigmentosum | 5.58e-08 | 1 |
non-Hodgkin lymphoma | 1.30e-07 | 1 |
cutaneous T cell lymphoma | 1.30e-07 | 1 |
mycosis fungoides | 1.30e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.