FFCP PHASE1:Hg19::chr16:24267473..24267476,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.02e-82!57;UBERON:0005068!6.02e-82!57;UBERON:0006241!6.02e-82!57;UBERON:0007135!6.02e-82!57;UBERON:0002619!1.15e-79!22;UBERON:0002020!2.17e-73!34;UBERON:0003528!2.17e-73!34;UBERON:0001869!9.82e-72!32;UBERON:0001950!2.35e-70!20;UBERON:0000956!6.33e-70!25;UBERON:0000203!6.33e-70!25;UBERON:0001893!2.52e-67!34;UBERON:0001017!1.16e-65!82;UBERON:0002616!1.98e-64!59;UBERON:0002791!2.72e-63!33;UBERON:0005743!2.42e-62!86;UBERON:0000955!3.69e-61!69;UBERON:0006238!3.69e-61!69;UBERON:0002780!3.22e-60!41;UBERON:0001890!3.22e-60!41;UBERON:0006240!3.22e-60!41;UBERON:0003080!1.09e-58!42;UBERON:0002346!8.00e-57!90;UBERON:0003075!6.19e-56!86;UBERON:0007284!6.19e-56!86;UBERON:0000073!7.15e-56!94;UBERON:0001016!7.15e-56!94;UBERON:0003056!5.68e-39!61;UBERON:0007023!9.72e-38!115;UBERON:0000033!4.61e-34!123;UBERON:0000153!3.56e-32!129;UBERON:0007811!3.56e-32!129;UBERON:0000924!2.04e-29!173;UBERON:0006601!2.04e-29!173;UBERON:0000200!6.96e-29!6;UBERON:0001871!2.61e-28!7;UBERON:0004121!2.97e-28!169;UBERON:0000349!3.91e-24!5;UBERON:0003076!3.10e-23!15;UBERON:0003057!3.10e-23!15;UBERON:0000025!2.32e-19!194;UBERON:0002021!6.66e-16!5;UBERON:0001872!8.37e-16!5;UBERON:0002771!3.40e-15!3;UBERON:0002240!6.63e-15!3;UBERON:0000988!2.35e-14!3;UBERON:0004111!3.29e-14!241;UBERON:0002298!6.80e-14!8;UBERON:0004733!4.94e-13!12;UBERON:0002028!4.94e-13!12;UBERON:0007277!4.94e-13!12;UBERON:0004732!5.47e-12!13;UBERON:0000477!7.73e-12!286;UBERON:0000064!1.25e-11!219;UBERON:0001954!4.43e-11!2;UBERON:0003022!4.43e-11!2;UBERON:0002421!4.43e-11!2;UBERON:0002600!4.43e-11!2;UBERON:0001870!6.88e-11!2;UBERON:0001876!1.06e-10!2;UBERON:0000483!1.90e-10!309;UBERON:0002148!2.08e-10!2;UBERON:0009662!2.08e-10!2;UBERON:0000119!2.81e-10!312;UBERON:0000475!3.48e-09!365;UBERON:0005174!3.92e-09!5;UBERON:0001137!3.92e-09!5;UBERON:0002420!2.02e-08!9;UBERON:0007245!2.02e-08!9;UBERON:0010009!2.02e-08!9;UBERON:0010011!2.02e-08!9;UBERON:0000454!2.02e-08!9;UBERON:0002680!2.41e-08!9;UBERON:0001895!2.41e-08!9;UBERON:0010092!2.41e-08!9;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0006331!3.28e-07!3;UBERON:0001896!9.30e-07!3;UBERON:0005290!9.30e-07!3;UBERON:0010096!9.30e-07!3 | |ontology_enrichment_uberon=UBERON:0001049!6.02e-82!57;UBERON:0005068!6.02e-82!57;UBERON:0006241!6.02e-82!57;UBERON:0007135!6.02e-82!57;UBERON:0002619!1.15e-79!22;UBERON:0002020!2.17e-73!34;UBERON:0003528!2.17e-73!34;UBERON:0001869!9.82e-72!32;UBERON:0001950!2.35e-70!20;UBERON:0000956!6.33e-70!25;UBERON:0000203!6.33e-70!25;UBERON:0001893!2.52e-67!34;UBERON:0001017!1.16e-65!82;UBERON:0002616!1.98e-64!59;UBERON:0002791!2.72e-63!33;UBERON:0005743!2.42e-62!86;UBERON:0000955!3.69e-61!69;UBERON:0006238!3.69e-61!69;UBERON:0002780!3.22e-60!41;UBERON:0001890!3.22e-60!41;UBERON:0006240!3.22e-60!41;UBERON:0003080!1.09e-58!42;UBERON:0002346!8.00e-57!90;UBERON:0003075!6.19e-56!86;UBERON:0007284!6.19e-56!86;UBERON:0000073!7.15e-56!94;UBERON:0001016!7.15e-56!94;UBERON:0003056!5.68e-39!61;UBERON:0007023!9.72e-38!115;UBERON:0000033!4.61e-34!123;UBERON:0000153!3.56e-32!129;UBERON:0007811!3.56e-32!129;UBERON:0000924!2.04e-29!173;UBERON:0006601!2.04e-29!173;UBERON:0000200!6.96e-29!6;UBERON:0001871!2.61e-28!7;UBERON:0004121!2.97e-28!169;UBERON:0000349!3.91e-24!5;UBERON:0003076!3.10e-23!15;UBERON:0003057!3.10e-23!15;UBERON:0000025!2.32e-19!194;UBERON:0002021!6.66e-16!5;UBERON:0001872!8.37e-16!5;UBERON:0002771!3.40e-15!3;UBERON:0002240!6.63e-15!3;UBERON:0000988!2.35e-14!3;UBERON:0004111!3.29e-14!241;UBERON:0002298!6.80e-14!8;UBERON:0004733!4.94e-13!12;UBERON:0002028!4.94e-13!12;UBERON:0007277!4.94e-13!12;UBERON:0004732!5.47e-12!13;UBERON:0000477!7.73e-12!286;UBERON:0000064!1.25e-11!219;UBERON:0001954!4.43e-11!2;UBERON:0003022!4.43e-11!2;UBERON:0002421!4.43e-11!2;UBERON:0002600!4.43e-11!2;UBERON:0001870!6.88e-11!2;UBERON:0001876!1.06e-10!2;UBERON:0000483!1.90e-10!309;UBERON:0002148!2.08e-10!2;UBERON:0009662!2.08e-10!2;UBERON:0000119!2.81e-10!312;UBERON:0000475!3.48e-09!365;UBERON:0005174!3.92e-09!5;UBERON:0001137!3.92e-09!5;UBERON:0002420!2.02e-08!9;UBERON:0007245!2.02e-08!9;UBERON:0010009!2.02e-08!9;UBERON:0010011!2.02e-08!9;UBERON:0000454!2.02e-08!9;UBERON:0002680!2.41e-08!9;UBERON:0001895!2.41e-08!9;UBERON:0010092!2.41e-08!9;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0006331!3.28e-07!3;UBERON:0001896!9.30e-07!3;UBERON:0005290!9.30e-07!3;UBERON:0010096!9.30e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002021;2.71e-40;5!UBERON:0001954;6.30e-26;2!UBERON:0003022;6.30e-26;2!UBERON:0002421;6.30e-26;2!UBERON:0002600;6.30e-26;2!UBERON:0002619;3.28e-20;22!UBERON:0000956;5.34e-18;25!UBERON:0000203;5.34e-18;25!UBERON:0002791;4.06e-14;32!UBERON:0001869;4.06e-14;32!UBERON:0002346;1.06e-13;4!UBERON:0000923;1.06e-13;4!UBERON:0010316;1.06e-13;4!UBERON:0005291;1.06e-13;4!UBERON:0002780;1.67e-12;41!UBERON:0001890;1.67e-12;41!UBERON:0003528;1.07e-11;34!UBERON:0002020;1.07e-11;34!UBERON:0002050;3.10e-11;5!UBERON:0005423;3.10e-11;5!UBERON:0000349;3.10e-11;5!UBERON:0001950;1.69e-10;20!UBERON:0001893;6.43e-10;34 | |ontology_enrichment_uberon_v019=UBERON:0002021;2.71e-40;5!UBERON:0001954;6.30e-26;2!UBERON:0003022;6.30e-26;2!UBERON:0002421;6.30e-26;2!UBERON:0002600;6.30e-26;2!UBERON:0002619;3.28e-20;22!UBERON:0000956;5.34e-18;25!UBERON:0000203;5.34e-18;25!UBERON:0002791;4.06e-14;32!UBERON:0001869;4.06e-14;32!UBERON:0002346;1.06e-13;4!UBERON:0000923;1.06e-13;4!UBERON:0010316;1.06e-13;4!UBERON:0005291;1.06e-13;4!UBERON:0002780;1.67e-12;41!UBERON:0001890;1.67e-12;41!UBERON:0003528;1.07e-11;34!UBERON:0002020;1.07e-11;34!UBERON:0002050;3.10e-11;5!UBERON:0005423;3.10e-11;5!UBERON:0000349;3.10e-11;5!UBERON:0001950;1.69e-10;20!UBERON:0001893;6.43e-10;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.71e-40,5;UBERON:0001954,9.18e-26,2;UBERON:0003022,9.18e-26,2;UBERON:0002421,9.18e-26,2;UBERON:0002600,9.18e-26,2;UBERON:0002619,3.62e-20,22;UBERON:0000956,5.83e-18,25;UBERON:0000203,5.83e-18,25;UBERON:0002791,2.31e-14,32;UBERON:0001869,2.31e-14,32;UBERON:0003528,1.35e-13,34;UBERON:0002020,1.35e-13,34;UBERON:0001893,1.35e-13,34;UBERON:0002780,1.73e-11,41;UBERON:0001890,1.73e-11,41;UBERON:0003080,1.73e-11,41;UBERON:0006240,1.73e-11,41;UBERON:0000349,3.60e-11,5;UBERON:0001950,1.69e-10,20;UBERON:0002346,5.98e-10,86;UBERON:0000073,3.93e-09,53;UBERON:0002616,3.93e-09,53;UBERON:0001049,1.07e-08,56;UBERON:0005068,1.07e-08,56;UBERON:0006241,1.07e-08,56;UBERON:0007135,1.07e-08,56;UBERON:0003056,4.61e-08,61;UBERON:0000955,3.10e-07,68;UBERON:0006238,3.10e-07,68 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.500763722825999,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73510069962603,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0.41023272848151,1.26035848110859,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0.781078098613847,0.620060389503552,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.591954962065642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.22583065500418,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.488105059607853,0.500763722825999,0,0.110929051536852,0.124192805882767,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73510069962603,0,0,0,0,0,0,0.192687675289379,1.41696576325585,0,0.41023272848151,1.26035848110859,0.276629009856872,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540300676947157,0.781078098613847,0.620060389503552,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.591954962065642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@CACNG3 | |short_description=p10@CACNG3 | ||
}} | }} |
Revision as of 12:40, 17 November 2012
Short description: | p10@CACNG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_CACNG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK055453_5end |
EntrezGene: | CACNG3 |
HGNC: | 1407 |
UniProt: | B3KP08 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.71e-40 | 5 |
Ammon's horn | 9.18e-26 | 2 |
lobe parts of cerebral cortex | 9.18e-26 | 2 |
hippocampal formation | 9.18e-26 | 2 |
limbic lobe | 9.18e-26 | 2 |
regional part of cerebral cortex | 3.62e-20 | 22 |
cerebral cortex | 5.83e-18 | 25 |
pallium | 5.83e-18 | 25 |
regional part of telencephalon | 2.31e-14 | 32 |
cerebral hemisphere | 2.31e-14 | 32 |
brain grey matter | 1.35e-13 | 34 |
gray matter | 1.35e-13 | 34 |
telencephalon | 1.35e-13 | 34 |
regional part of forebrain | 1.73e-11 | 41 |
forebrain | 1.73e-11 | 41 |
anterior neural tube | 1.73e-11 | 41 |
future forebrain | 1.73e-11 | 41 |
limbic system | 3.60e-11 | 5 |
neocortex | 1.69e-10 | 20 |
neurectoderm | 5.98e-10 | 86 |
regional part of nervous system | 3.93e-09 | 53 |
regional part of brain | 3.93e-09 | 53 |
neural tube | 1.07e-08 | 56 |
neural rod | 1.07e-08 | 56 |
future spinal cord | 1.07e-08 | 56 |
neural keel | 1.07e-08 | 56 |
pre-chordal neural plate | 4.61e-08 | 61 |
brain | 3.10e-07 | 68 |
future brain | 3.10e-07 | 68 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.