FFCP PHASE1:Hg19::chr1:160336851..160336868,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002319!1.50e-12!25;CL:0002322!1.56e-10!5;CL:0000047!2.89e-10!8;CL:0000133!1.48e-08!59;CL:0000242!3.17e-08!2;CL:0000039!4.91e-07!7;CL:0000586!4.91e-07!7 | |ontology_enrichment_celltype=CL:0002319!1.50e-12!25;CL:0002322!1.56e-10!5;CL:0000047!2.89e-10!8;CL:0000133!1.48e-08!59;CL:0000242!3.17e-08!2;CL:0000039!4.91e-07!7;CL:0000586!4.91e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.16e-18;25!CL:0000123;1.73e-18;2!CL:0000242;1.73e-18;2!CL:0000540;7.67e-13;6!CL:0000404;7.67e-13;6!CL:0000312;6.29e-08;5!CL:0000095;2.40e-07;17!CL:0000240;9.74e-07;6!CL:0000311;9.74e-07;6!CL:0000079;9.74e-07;6!CL:0000237;9.74e-07;6 | |ontology_enrichment_celltype_v019=CL:0002319;1.16e-18;25!CL:0000123;1.73e-18;2!CL:0000242;1.73e-18;2!CL:0000540;7.67e-13;6!CL:0000404;7.67e-13;6!CL:0000312;6.29e-08;5!CL:0000095;2.40e-07;17!CL:0000240;9.74e-07;6!CL:0000311;9.74e-07;6!CL:0000079;9.74e-07;6!CL:0000237;9.74e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.18e-18,25;CL:0000242,1.73e-18,2;CL:0000047,1.67e-16,8;CL:0000540,8.32e-13,6;CL:0000031,8.32e-13,6;CL:0000404,8.32e-13,6;CL:0000133,3.82e-12,59;CL:0000221,9.78e-10,72;CL:0000312,6.30e-08,5;CL:0000095,2.34e-07,17;CL:0000123,2.34e-07,17;CL:0000240,9.74e-07,6;CL:0000311,9.74e-07,6;CL:0000079,9.74e-07,6;CL:0000237,9.74e-07,6;CL:0000036,9.74e-07,6;CL:0000357,9.74e-07,6;CL:0000114,9.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;7.67e-13;6!UBERON:0006238;3.10e-07;10!CL:0000357;9.74e-07;6!CL:0000114;9.74e-07;6 | |ontology_enrichment_development_v019=CL:0000031;7.67e-13;6!UBERON:0006238;3.10e-07;10!CL:0000357;9.74e-07;6!CL:0000114;9.74e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0007029;1.76e-09;1!UBERON:0000922;2.15e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0007029;1.76e-09;1!UBERON:0000922;2.15e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.52e-11,89;UBERON:0001017,3.86e-10,81;UBERON:0007029,1.36e-09,1;UBERON:0004121,4.46e-08,171;UBERON:0000924,4.46e-08,171;UBERON:0006601,4.46e-08,171 | |||
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| ||
|short_description=p1@NHLH1 | |short_description=p1@NHLH1 | ||
}} | }} |
Revision as of 08:30, 17 November 2012
Short description: | p1@NHLH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_NHLH1_5end |
Coexpression cluster: | C171_merkel_neuroblastoma_pineal_retinoblastoma_carcinoid_small_eye |
Association with transcript: | 0bp_to_ENST00000302101, NM_005598, uc001fwa.2_5end |
EntrezGene: | NHLH1 |
HGNC: | 7817 |
UniProt: | Q02575Q5T203 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.18e-18 | 25 |
Merkel cell | 1.73e-18 | 2 |
neuronal stem cell | 1.67e-16 | 8 |
neuron | 8.32e-13 | 6 |
neuroblast | 8.32e-13 | 6 |
electrically signaling cell | 8.32e-13 | 6 |
neurectodermal cell | 3.82e-12 | 59 |
ectodermal cell | 9.78e-10 | 72 |
keratinocyte | 6.30e-08 | 5 |
neuron associated cell | 2.34e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.34e-07 | 17 |
stratified squamous epithelial cell | 9.74e-07 | 6 |
keratin accumulating cell | 9.74e-07 | 6 |
stratified epithelial cell | 9.74e-07 | 6 |
keratinizing barrier epithelial cell | 9.74e-07 | 6 |
epithelial fate stem cell | 9.74e-07 | 6 |
stratified epithelial stem cell | 9.74e-07 | 6 |
surface ectodermal cell | 9.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.52e-11 | 89 |
central nervous system | 3.86e-10 | 81 |
surface | 1.36e-09 | 1 |
ectoderm-derived structure | 4.46e-08 | 171 |
ectoderm | 4.46e-08 | 171 |
presumptive ectoderm | 4.46e-08 | 171 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.