FFCP PHASE1:Hg19::chr3:38035610..38035687,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000988!1.11e-14!182;CL:0000037!5.21e-13!172;CL:0000566!5.21e-13!172;CL:0000838!3.98e-12!52;CL:0000542!5.65e-12!53;CL:0000051!5.65e-12!53;CL:0000791!2.75e-11!18;CL:0000789!2.75e-11!18;CL:0002420!2.75e-11!18;CL:0002419!2.75e-11!18;CL:0000790!2.75e-11!18;CL:0000084!5.84e-11!25;CL:0000827!5.84e-11!25;CL:0002032!9.56e-11!165;CL:0000837!9.56e-11!165;CL:0000738!3.92e-10!140;CL:0002087!8.75e-09!119;CL:0000625!2.38e-08!11;CL:0002031!2.00e-07!124;CL:0002320!4.81e-07!365 | |ontology_enrichment_celltype=CL:0000988!1.11e-14!182;CL:0000037!5.21e-13!172;CL:0000566!5.21e-13!172;CL:0000838!3.98e-12!52;CL:0000542!5.65e-12!53;CL:0000051!5.65e-12!53;CL:0000791!2.75e-11!18;CL:0000789!2.75e-11!18;CL:0002420!2.75e-11!18;CL:0002419!2.75e-11!18;CL:0000790!2.75e-11!18;CL:0000084!5.84e-11!25;CL:0000827!5.84e-11!25;CL:0002032!9.56e-11!165;CL:0000837!9.56e-11!165;CL:0000738!3.92e-10!140;CL:0002087!8.75e-09!119;CL:0000625!2.38e-08!11;CL:0002031!2.00e-07!124;CL:0002320!4.81e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.85e-11;18!CL:0000789;1.85e-11;18!CL:0002419;1.85e-11;18!CL:0000084;8.82e-11;25!CL:0000625;1.92e-08;11!CL:0000542;7.71e-08;53 | |ontology_enrichment_celltype_v019=CL:0000791;1.85e-11;18!CL:0000789;1.85e-11;18!CL:0002419;1.85e-11;18!CL:0000084;8.82e-11;25!CL:0000625;1.92e-08;11!CL:0000542;7.71e-08;53 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.50e-16,177;CL:0000037,2.53e-14,168;CL:0000838,5.54e-12,52;CL:0002032,6.30e-12,161;CL:0000837,6.30e-12,161;CL:0000542,7.81e-12,53;CL:0000051,7.81e-12,53;CL:0000791,2.39e-11,18;CL:0000789,2.39e-11,18;CL:0002420,2.39e-11,18;CL:0002419,2.39e-11,18;CL:0000790,2.39e-11,18;CL:0000738,2.39e-11,136;CL:0000084,1.12e-10,25;CL:0000827,1.12e-10,25;CL:0002087,4.74e-10,115;CL:0002031,2.10e-08,120;CL:0000625,2.15e-08,11;CL:0002320,1.50e-07,361;CL:0000134,4.84e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;1.85e-11;18!CL:0000051;7.71e-08;53 | |ontology_enrichment_development_v019=CL:0000790;1.85e-11;18!CL:0000051;7.71e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.05e-09!115;UBERON:0000178!4.56e-08!15;UBERON:0000179!4.56e-08!15;UBERON:0000463!4.56e-08!15;UBERON:0001869!9.89e-08!32;UBERON:0002619!1.72e-07!22;UBERON:0001893!2.59e-07!34;UBERON:0002020!3.01e-07!34;UBERON:0003528!3.01e-07!34;UBERON:0002791!3.25e-07!33;UBERON:0001049!5.40e-07!57;UBERON:0005068!5.40e-07!57;UBERON:0006241!5.40e-07!57;UBERON:0007135!5.40e-07!57;UBERON:0001950!6.25e-07!20;UBERON:0003080!9.35e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!3.05e-09!115;UBERON:0000178!4.56e-08!15;UBERON:0000179!4.56e-08!15;UBERON:0000463!4.56e-08!15;UBERON:0001869!9.89e-08!32;UBERON:0002619!1.72e-07!22;UBERON:0001893!2.59e-07!34;UBERON:0002020!3.01e-07!34;UBERON:0003528!3.01e-07!34;UBERON:0002791!3.25e-07!33;UBERON:0001049!5.40e-07!57;UBERON:0005068!5.40e-07!57;UBERON:0006241!5.40e-07!57;UBERON:0007135!5.40e-07!57;UBERON:0001950!6.25e-07!20;UBERON:0003080!9.35e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.37e-08;15!UBERON:0000179;3.37e-08;15!UBERON:0000463;3.37e-08;15!UBERON:0002619;2.86e-07;22!UBERON:0001869;8.48e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.37e-08;15!UBERON:0000179;3.37e-08;15!UBERON:0000463;3.37e-08;15!UBERON:0002619;2.86e-07;22!UBERON:0001869;8.48e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.83e-09,114;UBERON:0000178,4.15e-08,15;UBERON:0000179,4.15e-08,15;UBERON:0000463,4.15e-08,15;UBERON:0001869,9.03e-08,32;UBERON:0002619,1.57e-07,22;UBERON:0002791,1.62e-07,32;UBERON:0001893,2.38e-07,34;UBERON:0003528,2.77e-07,34;UBERON:0002020,2.77e-07,34;UBERON:0002384,4.58e-07,371;UBERON:0001950,5.77e-07,20;UBERON:0001049,6.85e-07,56;UBERON:0005068,6.85e-07,56;UBERON:0006241,6.85e-07,56;UBERON:0007135,6.85e-07,56 | |||
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| ||
|short_description=p1@VILL | |short_description=p1@VILL | ||
}} | }} |
Revision as of 04:05, 17 November 2012
Short description: | p1@VILL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_VILL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465644, ENST00000484717, uc010hgu.2_5end |
EntrezGene: | VILL |
HGNC: | 30906 |
UniProt: | D6R9H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.50e-16 | 177 |
hematopoietic stem cell | 2.53e-14 | 168 |
lymphoid lineage restricted progenitor cell | 5.54e-12 | 52 |
hematopoietic oligopotent progenitor cell | 6.30e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.30e-12 | 161 |
lymphocyte | 7.81e-12 | 53 |
common lymphoid progenitor | 7.81e-12 | 53 |
mature alpha-beta T cell | 2.39e-11 | 18 |
alpha-beta T cell | 2.39e-11 | 18 |
immature T cell | 2.39e-11 | 18 |
mature T cell | 2.39e-11 | 18 |
immature alpha-beta T cell | 2.39e-11 | 18 |
leukocyte | 2.39e-11 | 136 |
T cell | 1.12e-10 | 25 |
pro-T cell | 1.12e-10 | 25 |
nongranular leukocyte | 4.74e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.10e-08 | 120 |
CD8-positive, alpha-beta T cell | 2.15e-08 | 11 |
connective tissue cell | 1.50e-07 | 361 |
mesenchymal cell | 4.84e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.83e-09 | 114 |
blood | 4.15e-08 | 15 |
haemolymphatic fluid | 4.15e-08 | 15 |
organism substance | 4.15e-08 | 15 |
cerebral hemisphere | 9.03e-08 | 32 |
regional part of cerebral cortex | 1.57e-07 | 22 |
regional part of telencephalon | 1.62e-07 | 32 |
telencephalon | 2.38e-07 | 34 |
brain grey matter | 2.77e-07 | 34 |
gray matter | 2.77e-07 | 34 |
connective tissue | 4.58e-07 | 371 |
neocortex | 5.77e-07 | 20 |
neural tube | 6.85e-07 | 56 |
neural rod | 6.85e-07 | 56 |
future spinal cord | 6.85e-07 | 56 |
neural keel | 6.85e-07 | 56 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.