FFCP PHASE1:Hg19::chr12:3309741..3309748,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002575!8.19e-09!2 | |ontology_enrichment_celltype=CL:0002575!8.19e-09!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.75e-74;3!UBERON:0010227;2.15e-26;1!UBERON:0010226;6.72e-26;1!UBERON:0004140;6.72e-26;1 | |ontology_enrichment_development_v019=UBERON:0006215;2.75e-74;3!UBERON:0010227;2.15e-26;1!UBERON:0010226;6.72e-26;1!UBERON:0004140;6.72e-26;1 | ||
|ontology_enrichment_disease=DOID:114!2.59e-09!2 | |ontology_enrichment_disease=DOID:114!2.59e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:114;1.14e-13;2!DOID:1287;1.75e-07;4 | |ontology_enrichment_disease_v019=DOID:114;1.14e-13;2!DOID:1287;1.75e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:114,9.40e-14,2;DOID:1287,1.59e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002680!3.19e-15!9;UBERON:0001895!3.19e-15!9;UBERON:0010092!3.19e-15!9;UBERON:0004733!3.00e-11!12;UBERON:0002028!3.00e-11!12;UBERON:0007277!3.00e-11!12;UBERON:0002037!3.67e-11!6;UBERON:0006215!3.67e-11!6;UBERON:0004732!2.48e-10!13;UBERON:0007023!7.98e-10!115;UBERON:0000341!5.53e-09!2;UBERON:0003076!7.28e-09!15;UBERON:0003057!7.28e-09!15;UBERON:0007100!1.66e-08!27;UBERON:0000955!1.69e-08!69;UBERON:0006238!1.69e-08!69;UBERON:0003103!5.16e-08!69;UBERON:0005743!2.56e-07!86 | |ontology_enrichment_uberon=UBERON:0002680!3.19e-15!9;UBERON:0001895!3.19e-15!9;UBERON:0010092!3.19e-15!9;UBERON:0004733!3.00e-11!12;UBERON:0002028!3.00e-11!12;UBERON:0007277!3.00e-11!12;UBERON:0002037!3.67e-11!6;UBERON:0006215!3.67e-11!6;UBERON:0004732!2.48e-10!13;UBERON:0007023!7.98e-10!115;UBERON:0000341!5.53e-09!2;UBERON:0003076!7.28e-09!15;UBERON:0003057!7.28e-09!15;UBERON:0007100!1.66e-08!27;UBERON:0000955!1.69e-08!69;UBERON:0006238!1.69e-08!69;UBERON:0003103!5.16e-08!69;UBERON:0005743!2.56e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.18e-37;6!UBERON:0004151;5.06e-34;3!UBERON:0002079;2.15e-26;1!UBERON:0002084;6.72e-26;1!UBERON:0002082;6.72e-26;1!UBERON:0002680;2.09e-25;9!UBERON:0001895;2.09e-25;9!UBERON:0007100;6.07e-25;25!UBERON:0004733;2.90e-19;12!UBERON:0002028;2.90e-19;12!UBERON:0004732;7.64e-18;13!UBERON:0002081;6.43e-14;2!UBERON:0000948;7.41e-11;22 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.18e-37;6!UBERON:0004151;5.06e-34;3!UBERON:0002079;2.15e-26;1!UBERON:0002084;6.72e-26;1!UBERON:0002082;6.72e-26;1!UBERON:0002680;2.09e-25;9!UBERON:0001895;2.09e-25;9!UBERON:0007100;6.07e-25;25!UBERON:0004733;2.90e-19;12!UBERON:0002028;2.90e-19;12!UBERON:0004732;7.64e-18;13!UBERON:0002081;6.43e-14;2!UBERON:0000948;7.41e-11;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.19e-38,6;UBERON:0006215,9.19e-38,6;UBERON:0004151,6.51e-34,3;UBERON:0002079,2.16e-26,1;UBERON:0002084,9.79e-26,1;UBERON:0002082,9.79e-26,1;UBERON:0010226,9.79e-26,1;UBERON:0002680,1.77e-25,9;UBERON:0001895,1.77e-25,9;UBERON:0010092,1.77e-25,9;UBERON:0007100,4.37e-23,27;UBERON:0004733,2.56e-19,12;UBERON:0002028,2.56e-19,12;UBERON:0007277,2.56e-19,12;UBERON:0004732,6.81e-18,13;UBERON:0003076,1.31e-15,15;UBERON:0003057,1.31e-15,15;UBERON:0002081,6.43e-14,2;UBERON:0010227,6.43e-14,2;UBERON:0007023,1.08e-10,114;UBERON:0000948,5.92e-10,24;UBERON:0005498,5.92e-10,24;UBERON:0004140,5.92e-10,24;UBERON:0009881,5.92e-10,24;UBERON:0004141,5.92e-10,24;UBERON:0003084,5.92e-10,24;UBERON:0007005,5.92e-10,24;UBERON:0004139,5.92e-10,24;UBERON:0004291,5.92e-10,24;UBERON:0003103,2.44e-09,68;UBERON:0010314,8.82e-07,132 | |||
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| ||
|short_description=p@chr12:3309741..3309748,+ | |short_description=p@chr12:3309741..3309748,+ | ||
}} | }} |
Revision as of 23:33, 16 November 2012
Short description: | p@chr12:3309741..3309748, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:3309741..3309748, + |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.19e-38 | 6 |
rhombic lip | 9.19e-38 | 6 |
cardiac chamber | 6.51e-34 | 3 |
left cardiac atrium | 2.16e-26 | 1 |
heart left ventricle | 9.79e-26 | 1 |
cardiac ventricle | 9.79e-26 | 1 |
future cardiac ventricle | 9.79e-26 | 1 |
regional part of metencephalon | 1.77e-25 | 9 |
metencephalon | 1.77e-25 | 9 |
future metencephalon | 1.77e-25 | 9 |
primary circulatory organ | 4.37e-23 | 27 |
segmental subdivision of hindbrain | 2.56e-19 | 12 |
hindbrain | 2.56e-19 | 12 |
presumptive hindbrain | 2.56e-19 | 12 |
segmental subdivision of nervous system | 6.81e-18 | 13 |
posterior neural tube | 1.31e-15 | 15 |
chordal neural plate | 1.31e-15 | 15 |
cardiac atrium | 6.43e-14 | 2 |
future cardiac atrium | 6.43e-14 | 2 |
adult organism | 1.08e-10 | 114 |
heart | 5.92e-10 | 24 |
primitive heart tube | 5.92e-10 | 24 |
primary heart field | 5.92e-10 | 24 |
anterior lateral plate mesoderm | 5.92e-10 | 24 |
heart tube | 5.92e-10 | 24 |
heart primordium | 5.92e-10 | 24 |
cardiac mesoderm | 5.92e-10 | 24 |
cardiogenic plate | 5.92e-10 | 24 |
heart rudiment | 5.92e-10 | 24 |
compound organ | 2.44e-09 | 68 |
structure with developmental contribution from neural crest | 8.82e-07 | 132 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.40e-14 | 2 |
cardiovascular system disease | 1.59e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.