FFCP PHASE1:Hg19::chr20:34140960..34140961,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000064;2.47e-07;3!CL:0000067;2.47e-07;3!CL:0005012;2.47e-07;3!CL:0002304;2.47e-07;3 | |ontology_enrichment_celltype_v019=CL:0000064;2.47e-07;3!CL:0000067;2.47e-07;3!CL:0005012;2.47e-07;3!CL:0002304;2.47e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.63e-07,3;CL:0000067,2.63e-07,3;CL:0005012,2.63e-07,3;CL:0002304,2.63e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!3.65e-12!235;DOID:0050687!5.97e-12!143;DOID:14566!8.50e-12!239;DOID:305!1.60e-08!106 | |ontology_enrichment_disease=DOID:162!3.65e-12!235;DOID:0050687!5.97e-12!143;DOID:14566!8.50e-12!239;DOID:305!1.60e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:3193;2.27e-10;2!DOID:962;2.27e-10;2!DOID:1192;2.47e-07;3 | |ontology_enrichment_disease_v019=DOID:3193;2.27e-10;2!DOID:962;2.27e-10;2!DOID:1192;2.47e-07;3 | ||
|ontology_enrichment_disease_v019_2=DOID:3193,2.27e-10,2;DOID:962,2.27e-10,2;DOID:1192,2.47e-07,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.27e-10;2!UBERON:0003714;2.27e-10;2!UBERON:0002757;2.27e-10;2!UBERON:0010134;2.27e-10;2!UBERON:0005408;2.27e-10;2!UBERON:0001899;2.27e-10;2!UBERON:0001778;2.47e-07;3!UBERON:0001775;2.47e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001905;2.27e-10;2!UBERON:0003714;2.27e-10;2!UBERON:0002757;2.27e-10;2!UBERON:0010134;2.27e-10;2!UBERON:0005408;2.27e-10;2!UBERON:0001899;2.27e-10;2!UBERON:0001778;2.47e-07;3!UBERON:0001775;2.47e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003714,2.27e-10,2;UBERON:0001905,3.27e-10,2;UBERON:0002757,3.27e-10,2;UBERON:0010134,3.27e-10,2;UBERON:0005408,3.27e-10,2;UBERON:0001899,3.27e-10,2;UBERON:0001778,2.63e-07,3;UBERON:0001775,2.63e-07,3 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.458480434487708,0.246301768349837,0.393553906568396,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0.426507697462265,0,0.553995408531877,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.68152568894461,0,0.983548850569165,1.57204305099666,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0.535081656179426,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,1.15859523106239,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,1.10864698731282,0.351339142772504,0.392937226493138,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0,1.0126579934476,0.292311015483596,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.245976877086227,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0.264145302039678,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.831883446123229,0.535286966391485,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0.557409525377156,0.28853842595289,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,1.4098700508785,0,0,0.121360521749513,0.445773537109913,0.284136146806413,0,0,0,0,0.422008249231538,0.222617410045812,0.329607748453519,1.05562704063997,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.246169610922139,0,0.449341755736634,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.568967241427498,0.254253650292766,0,0,0.291604613383254,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0.886642856860642,0,0,0,0,0.113942055847001,0.23056390438806,0,0.651884231532048,0,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.889563386041866,0.247127877893006,0,0.606610196826093,0,0,0,0.391329237864179,0,0,0,0.30607276163049,0.505492637027904,0,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,0,0.391969589657511,0.34823682632161,0.52418000472609,0,0.19351266257817,0,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0.397429223405979,0.126621591911757,0,0.0801588202515337,0,0.39961921916426,0.144090417154106,0.343609788497747,0.686379991447858,0.14405479798815,0.124252535565433,0.235694034616795,0,0.313808538937,0,0,0,0.547621515567972,0,0,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0.236349546921671,0.0824158583811665,0.471824806979294,0.0984274815147488,0.254019996197353,0,0.272406812223151,0.160753148465019,0,0,0.2249738915515,0,0.242998226632099,0.335434687599266,0.0788057072991982,0,0.316801009558219,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0.328370082997356,0.170388021785422,0.339936274560377,0,0,0.129282956361551,0.13223260174269,0.684347351537318,0,0.106787412567695,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.628216385000937,0,0.122026264901963,0.500763722825999,0.573409195690071,0.554645257684261,0.683060432355218,0.276697269872462,0.249960815924213,0.454947352624943,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0.800055529326307,0,0,0,0.192619830407303,0.214441591374926,0,0.453411851024545,0,0.244736704506468,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.327130788511688,0.327609848846413,0.245772908753719,0,0.19998739585493,0.320075189082423,0.172214979660816,0.567515953566836,0.184105950251841,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0.169732529954025,0.850299680406731,0.867550349813015,1.11728983594649,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.478901577171454,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0.294443155503077,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0,1.0085253435176,0.781514011233092,0.523813388962845,0.327543835020193,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0,0,1.00885116665647,0,0,0,0,0.171488009437418,0.135939465953663,0.328863867814245,0,0.667388411352415,0.078493092850514,0.314231179832004,0.280272163313789,0.913158720509496,0.215927591218621,0.47775168788705,0.285906176706625,0.316027223465453,0.581207126840626,0.695433089210318,0,0.207216164163037,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0.423387050190929,0.4582137370881,0,0,0.335566295393377,0.294450700845729,0.121917924982269,0,0,0,0,0,0.795803100645473,0.118920090777569,0.11294608203896,0.219881033490858,0.603851374266694,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0.0644578879735772,0.299823467774787,0,0.352894871715692,0.0802413666891683,0,0,0.573358332605805,0,0.135982980381829,0.872701380680755,0,0,0,0.432626562123789,0.378499274505237,0.218531143927391,0.380095503034311,0.203977659483963,0.26721740526556,0,0,0.0757786982182394,0.535928260312357,0,0.20686599172379,0.426467963801962,0.23806443146374,0.0645889098360061,0.248298857183432,0.33639558774184,0.0636471582781649,0.808468755832877,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0.106727345877715,0,0.359300808426348,0,0,0,0,0.201273793591026,0.641136984606466 | |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0.458480434487708,0.246301768349837,0.393553906568396,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0.426507697462265,0,0.553995408531877,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.68152568894461,0,0.983548850569165,1.57204305099666,0,0,0.32592226663359,0.473447805734733,0,0,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0.535081656179426,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,1.15859523106239,0,0,0,0,0,0.434539556882471,0,0,0.0945348171640679,1.10864698731282,0.351339142772504,0.392937226493138,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0.161872944368132,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0.538168907066586,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0,1.0126579934476,0.292311015483596,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.236613600079688,0,0,0.220587945464788,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.245976877086227,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0,0,0.0895585227028483,0,0,0,0.264145302039678,0,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.336255431980582,0.197030760201927,0.215627574859517,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.831883446123229,0.535286966391485,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.114814448164607,0.546273504020151,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.275673144969061,0,0,0.0852266274161009,0.178064071293475,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0.557409525377156,0.28853842595289,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,1.4098700508785,0,0,0.121360521749513,0.445773537109913,0.284136146806413,0,0,0,0,0.422008249231538,0.222617410045812,0.329607748453519,1.05562704063997,0.19924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0.246169610922139,0,0.449341755736634,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.568967241427498,0.254253650292766,0,0,0.291604613383254,0.347249989866585,0,0.241192877250816,0,0.110579259931225,0.886642856860642,0,0,0,0,0.113942055847001,0.23056390438806,0,0.651884231532048,0,0,0,0,0,0.332423363800313,0,0,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0.0884575645033392,0.611030144933625,0.889563386041866,0.247127877893006,0,0.606610196826093,0,0,0,0.391329237864179,0,0,0,0.30607276163049,0.505492637027904,0,0.103688191397247,0,0,0,0,0.569219092059585,0.138674673013139,0,0.391969589657511,0.34823682632161,0.52418000472609,0,0.19351266257817,0,0.164230914106418,0.0969890164884194,0,0.225980740780532,0,0.397429223405979,0.126621591911757,0,0.0801588202515337,0,0.39961921916426,0.144090417154106,0.343609788497747,0.686379991447858,0.14405479798815,0.124252535565433,0.235694034616795,0,0.313808538937,0,0,0,0.547621515567972,0,0,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0.236349546921671,0.0824158583811665,0.471824806979294,0.0984274815147488,0.254019996197353,0,0.272406812223151,0.160753148465019,0,0,0.2249738915515,0,0.242998226632099,0.335434687599266,0.0788057072991982,0,0.316801009558219,0,0.383830394638891,0,0,0.5085370753095,0,0,0,0,0.328370082997356,0.170388021785422,0.339936274560377,0,0,0.129282956361551,0.13223260174269,0.684347351537318,0,0.106787412567695,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.628216385000937,0,0.122026264901963,0.500763722825999,0.573409195690071,0.554645257684261,0.683060432355218,0.276697269872462,0.249960815924213,0.454947352624943,0.285465333544967,0.235265819698172,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0.464033759878494,0,0.800055529326307,0,0,0,0.192619830407303,0.214441591374926,0,0.453411851024545,0,0.244736704506468,0.179088841081487,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.327130788511688,0.327609848846413,0.245772908753719,0,0.19998739585493,0.320075189082423,0.172214979660816,0.567515953566836,0.184105950251841,0,0,0.383683113910955,0.107824811396682,0.157265941855896,0,0.169732529954025,0.850299680406731,0.867550349813015,1.11728983594649,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.478901577171454,0.41023272848151,0,0.0691572524642179,0.161475645631851,0,0.294443155503077,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0,1.0085253435176,0.781514011233092,0.523813388962845,0.327543835020193,0.147856086217045,0.0675375846183947,0,0.206686796501184,0.126831620387814,0,0,0.496211178389294,0.175871244359621,0,0,1.00885116665647,0,0,0,0,0.171488009437418,0.135939465953663,0.328863867814245,0,0.667388411352415,0.078493092850514,0.314231179832004,0.280272163313789,0.913158720509496,0.215927591218621,0.47775168788705,0.285906176706625,0.316027223465453,0.581207126840626,0.695433089210318,0,0.207216164163037,0,0,0.430227358820278,0.118332000730565,0.0852134047591577,0.423387050190929,0.4582137370881,0,0,0.335566295393377,0.294450700845729,0.121917924982269,0,0,0,0,0,0.795803100645473,0.118920090777569,0.11294608203896,0.219881033490858,0.603851374266694,0,0.218559560503957,0,0,0.235676547101626,0.196308467114945,0.297046400327086,0,0.169927114687817,0,0.0644578879735772,0.299823467774787,0,0.352894871715692,0.0802413666891683,0,0,0.573358332605805,0,0.135982980381829,0.872701380680755,0,0,0,0.432626562123789,0.378499274505237,0.218531143927391,0.380095503034311,0.203977659483963,0.26721740526556,0,0,0.0757786982182394,0.535928260312357,0,0.20686599172379,0.426467963801962,0.23806443146374,0.0645889098360061,0.248298857183432,0.33639558774184,0.0636471582781649,0.808468755832877,0,0,0.134704106029175,0.215166616178029,0,0.0814032686109745,0.106727345877715,0,0.359300808426348,0,0,0,0,0.201273793591026,0.641136984606466 | ||
|short_description=p@chr20:34140960..34140961,+ | |short_description=p@chr20:34140960..34140961,+ | ||
}} | }} |
Revision as of 23:15, 16 November 2012
Short description: | p@chr20:34140960..34140961, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr20:34140960..34140961, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.63e-07 | 3 |
ciliated epithelial cell | 2.63e-07 | 3 |
multi-ciliated epithelial cell | 2.63e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neural tissue | 2.27e-10 | 2 |
pineal body | 3.27e-10 | 2 |
regional part of epithalamus | 3.27e-10 | 2 |
secretory circumventricular organ | 3.27e-10 | 2 |
circumventricular organ | 3.27e-10 | 2 |
epithalamus | 3.27e-10 | 2 |
ciliary epithelium | 2.63e-07 | 3 |
ciliary body | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 2.27e-10 | 2 |
neurofibroma | 2.27e-10 | 2 |
peripheral nervous system neoplasm | 2.47e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.