FFCP PHASE1:Hg19::chr19:11530043..11530048,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.54e-15;6!CL:0002255;1.54e-15;6 | |ontology_enrichment_celltype_v019=CL:0002149;1.54e-15;6!CL:0002255;1.54e-15;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.51e-15,6;CL:0002255,1.51e-15,6 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.01e-21;2!UBERON:0005754;2.54e-11;1!UBERON:0005425;2.54e-11;1!UBERON:0008425;2.54e-11;1!UBERON:0003918;1.51e-09;10!UBERON:0007687;1.51e-09;10!UBERON:0007123;4.40e-09;5 | |ontology_enrichment_development_v019=UBERON:0007297;7.01e-21;2!UBERON:0005754;2.54e-11;1!UBERON:0005425;2.54e-11;1!UBERON:0008425;2.54e-11;1!UBERON:0003918;1.51e-09;10!UBERON:0007687;1.51e-09;10!UBERON:0007123;4.40e-09;5 | ||
|ontology_enrichment_disease=DOID:305!5.38e-12!106;DOID:0050687!6.72e-11!143 | |ontology_enrichment_disease=DOID:305!5.38e-12!106;DOID:0050687!6.72e-11!143 | ||
|ontology_enrichment_disease_v019=DOID:3001;1.54e-15;6!DOID:3119;4.71e-07;14 | |ontology_enrichment_disease_v019=DOID:3001;1.54e-15;6!DOID:3119;4.71e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,1.51e-15,6;DOID:3119,3.83e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.19e-18!115;UBERON:0000062!1.44e-07!511;UBERON:0002294!2.67e-07!7;UBERON:0001173!2.67e-07!7;UBERON:0004912!2.67e-07!7;UBERON:0000073!3.03e-07!94;UBERON:0001016!3.03e-07!94;UBERON:0001017!6.10e-07!82;UBERON:0005743!7.12e-07!86 | |ontology_enrichment_uberon=UBERON:0007023!3.19e-18!115;UBERON:0000062!1.44e-07!511;UBERON:0002294!2.67e-07!7;UBERON:0001173!2.67e-07!7;UBERON:0004912!2.67e-07!7;UBERON:0000073!3.03e-07!94;UBERON:0001016!3.03e-07!94;UBERON:0001017!6.10e-07!82;UBERON:0005743!7.12e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.11e-30;3!UBERON:0004054;2.11e-30;3!UBERON:0005904;5.55e-23;4!UBERON:0004175;1.15e-16;21!UBERON:0001000;2.54e-11;1!UBERON:0000998;2.54e-11;1!UBERON:0000941;2.54e-11;1!UBERON:0001301;2.54e-11;1!UBERON:0001785;2.54e-11;1!UBERON:0002464;2.54e-11;1!UBERON:0004904;2.54e-11;1!UBERON:0006868;2.54e-11;1!UBERON:0001021;2.54e-11;1!UBERON:0005352;2.54e-11;1!UBERON:0000058;1.51e-09;10!UBERON:0002046;4.40e-09;5!UBERON:0003135;1.00e-08;11!UBERON:0003133;5.54e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0006947;2.11e-30;3!UBERON:0004054;2.11e-30;3!UBERON:0005904;5.55e-23;4!UBERON:0004175;1.15e-16;21!UBERON:0001000;2.54e-11;1!UBERON:0000998;2.54e-11;1!UBERON:0000941;2.54e-11;1!UBERON:0001301;2.54e-11;1!UBERON:0001785;2.54e-11;1!UBERON:0002464;2.54e-11;1!UBERON:0004904;2.54e-11;1!UBERON:0006868;2.54e-11;1!UBERON:0001021;2.54e-11;1!UBERON:0005352;2.54e-11;1!UBERON:0000058;1.51e-09;10!UBERON:0002046;4.40e-09;5!UBERON:0003135;1.00e-08;11!UBERON:0003133;5.54e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,5.53e-30,3;UBERON:0004054,5.53e-30,3;UBERON:0005904,1.14e-22,4;UBERON:0004175,7.55e-14,25;UBERON:0001301,1.97e-11,1;UBERON:0000941,3.63e-11,1;UBERON:0001785,3.63e-11,1;UBERON:0002464,3.63e-11,1;UBERON:0004904,3.63e-11,1;UBERON:0001021,3.63e-11,1;UBERON:0003902,3.63e-11,1;UBERON:0005425,3.63e-11,1;UBERON:0000998,4.44e-11,1;UBERON:0006868,4.44e-11,1;UBERON:0001000,4.91e-11,1;UBERON:0005352,4.91e-11,1;UBERON:0002046,3.39e-09,5;UBERON:0004117,3.39e-09,5;UBERON:0007689,3.39e-09,5;UBERON:0007123,3.39e-09,5;UBERON:0003091,3.39e-09,5;UBERON:0003135,1.29e-08,11;UBERON:0003133,5.16e-07,48 | |||
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| ||
|short_description=p4@RGL3 | |short_description=p4@RGL3 | ||
}} | }} |
Revision as of 07:16, 16 November 2012
Short description: | p4@RGL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RGL3_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000380456, ENST00000393423, NM_001035223, NM_001161616, uc002mrm.2, uc002mrn.2, uc002mro.2, uc002mrp.2, uc002mrq.2_5end |
EntrezGene: | RGL3 |
HGNC: | 30282 |
UniProt: | Q3MIN7B5ME84B7ZL22 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.51e-15 | 6 |
stromal cell of endometrium | 1.51e-15 | 6 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 5.53e-30 | 3 |
internal male genitalia | 5.53e-30 | 3 |
duct of male reproductive system | 1.14e-22 | 4 |
internal genitalia | 7.55e-14 | 25 |
epididymis | 1.97e-11 | 1 |
cranial nerve II | 3.63e-11 | 1 |
cranial nerve | 3.63e-11 | 1 |
nerve trunk | 3.63e-11 | 1 |
nerve connecting eye with brain | 3.63e-11 | 1 |
nerve | 3.63e-11 | 1 |
retinal neural layer | 3.63e-11 | 1 |
presumptive neural retina | 3.63e-11 | 1 |
seminal vesicle | 4.44e-11 | 1 |
seminal fluid secreting gland | 4.44e-11 | 1 |
vas deferens | 4.91e-11 | 1 |
spermatic cord | 4.91e-11 | 1 |
thyroid gland | 3.39e-09 | 5 |
pharyngeal pouch | 3.39e-09 | 5 |
thyroid diverticulum | 3.39e-09 | 5 |
pharyngeal pouch 2 | 3.39e-09 | 5 |
thyroid primordium | 3.39e-09 | 5 |
male reproductive organ | 1.29e-08 | 11 |
reproductive organ | 5.16e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.51e-15 | 6 |
gastrointestinal system cancer | 3.83e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.