FFCP PHASE1:Hg19::chr3:128516853..128516867,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002194!1.87e-08!63;CL:0000576!1.87e-08!63;CL:0000040!1.87e-08!63;CL:0000559!1.87e-08!63;CL:0002009!3.71e-08!65;CL:0002057!5.38e-08!42;CL:0000839!1.16e-07!70;CL:0000766!1.38e-07!76;CL:0000860!1.79e-07!45;CL:0000557!3.09e-07!71 | |ontology_enrichment_celltype=CL:0002194!1.87e-08!63;CL:0000576!1.87e-08!63;CL:0000040!1.87e-08!63;CL:0000559!1.87e-08!63;CL:0002009!3.71e-08!65;CL:0002057!5.38e-08!42;CL:0000839!1.16e-07!70;CL:0000766!1.38e-07!76;CL:0000860!1.79e-07!45;CL:0000557!3.09e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-14;39!CL:0000234;1.20e-14;39!CL:0000860;7.47e-14;33!CL:0002057;7.47e-14;33!CL:0000576;1.68e-08;48 | |ontology_enrichment_celltype_v019=CL:0000473;1.20e-14;39!CL:0000234;1.20e-14;39!CL:0000860;7.47e-14;33!CL:0002057;7.47e-14;33!CL:0000576;1.68e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.77e-16,48;CL:0000234,7.77e-16,48;CL:0002194,2.23e-15,59;CL:0000576,2.23e-15,59;CL:0000040,2.23e-15,59;CL:0000559,2.23e-15,59;CL:0002009,1.18e-14,61;CL:0000766,4.78e-14,72;CL:0000860,2.62e-13,42;CL:0002057,2.62e-13,42;CL:0000839,4.80e-13,66;CL:0000557,9.42e-13,67;CL:0000763,1.39e-08,108;CL:0000049,1.39e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-10;42 | |ontology_enrichment_development_v019=CL:0002057;3.70e-10;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;4.24e-08;3!DOID:127;4.24e-08;3 | |ontology_enrichment_disease_v019=DOID:0060084;4.24e-08;3!DOID:127;4.24e-08;3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.82e-08,3;DOID:127,2.82e-08,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.76e-10,76;UBERON:0001474,2.94e-09,82;UBERON:0004765,1.19e-08,90;UBERON:0002390,1.84e-08,98;UBERON:0003061,1.84e-08,98;UBERON:0002405,3.35e-08,93;UBERON:0001434,6.34e-08,100;UBERON:0002193,9.16e-08,108 | |||
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| ||
|short_description=p10@RAB7A | |short_description=p10@RAB7A | ||
}} | }} |
Revision as of 21:46, 15 November 2012
Short description: | p10@RAB7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_RAB7A_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_BX537775_5end |
EntrezGene: | RAB7A |
HGNC: | 9788 |
UniProt: | Q7Z680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.77e-16 | 48 |
phagocyte | 7.77e-16 | 48 |
monopoietic cell | 2.23e-15 | 59 |
monocyte | 2.23e-15 | 59 |
monoblast | 2.23e-15 | 59 |
promonocyte | 2.23e-15 | 59 |
macrophage dendritic cell progenitor | 1.18e-14 | 61 |
myeloid leukocyte | 4.78e-14 | 72 |
classical monocyte | 2.62e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.62e-13 | 42 |
myeloid lineage restricted progenitor cell | 4.80e-13 | 66 |
granulocyte monocyte progenitor cell | 9.42e-13 | 67 |
myeloid cell | 1.39e-08 | 108 |
common myeloid progenitor | 1.39e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.76e-10 | 76 |
bone element | 2.94e-09 | 82 |
skeletal element | 1.19e-08 | 90 |
hematopoietic system | 1.84e-08 | 98 |
blood island | 1.84e-08 | 98 |
immune system | 3.35e-08 | 93 |
skeletal system | 6.34e-08 | 100 |
hemolymphoid system | 9.16e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.82e-08 | 3 |
leiomyoma | 2.82e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.