FFCP PHASE1:Mm9::chr10:127617262..127617274,-: Difference between revisions
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|id=chr10:127617262..127617274,- | |id=chr10:127617262..127617274,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.16e-09,7;CL:0002494,1.79e-08,3;CL:0000737,1.79e-08,3;CL:0000746,1.79e-08,3;CL:0000513,1.79e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.26e-13!33;UBERON:0004535!1.87e-11!23;UBERON:0001009!1.87e-11!23;UBERON:0003914!7.11e-11!47;UBERON:0009569!2.49e-10!66;UBERON:0007100!2.63e-09!18;UBERON:0000948!2.63e-09!18;UBERON:0005498!2.63e-09!18;UBERON:0004140!2.63e-09!18;UBERON:0009881!2.63e-09!18;UBERON:0004141!2.63e-09!18;UBERON:0003084!2.63e-09!18;UBERON:0007005!2.63e-09!18;UBERON:0004139!2.63e-09!18;UBERON:0004291!2.63e-09!18;UBERON:0002100!8.49e-09!98;UBERON:0005177!8.69e-09!85;UBERON:0000926!1.25e-08!193;UBERON:0004120!1.25e-08!193;UBERON:0006603!1.25e-08!193;UBERON:0005172!4.11e-07!49;UBERON:0005173!4.11e-07!49;UBERON:0002417!4.11e-07!49;UBERON:0000916!4.11e-07!49 | |ontology_enrichment_uberon=UBERON:0004872!2.26e-13!33;UBERON:0004535!1.87e-11!23;UBERON:0001009!1.87e-11!23;UBERON:0003914!7.11e-11!47;UBERON:0009569!2.49e-10!66;UBERON:0007100!2.63e-09!18;UBERON:0000948!2.63e-09!18;UBERON:0005498!2.63e-09!18;UBERON:0004140!2.63e-09!18;UBERON:0009881!2.63e-09!18;UBERON:0004141!2.63e-09!18;UBERON:0003084!2.63e-09!18;UBERON:0007005!2.63e-09!18;UBERON:0004139!2.63e-09!18;UBERON:0004291!2.63e-09!18;UBERON:0002100!8.49e-09!98;UBERON:0005177!8.69e-09!85;UBERON:0000926!1.25e-08!193;UBERON:0004120!1.25e-08!193;UBERON:0006603!1.25e-08!193;UBERON:0005172!4.11e-07!49;UBERON:0005173!4.11e-07!49;UBERON:0002417!4.11e-07!49;UBERON:0000916!4.11e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,7.47e-13,14;UBERON:0000117,7.47e-13,14;UBERON:0000171,7.47e-13,14;UBERON:0000170,7.47e-13,14;UBERON:0005597,7.47e-13,14;UBERON:0000118,7.47e-13,14;UBERON:0002100,8.54e-13,90;UBERON:0004535,1.44e-12,23;UBERON:0001009,1.44e-12,23;UBERON:0007100,1.53e-11,18;UBERON:0000948,1.53e-11,18;UBERON:0005498,1.53e-11,18;UBERON:0004140,1.53e-11,18;UBERON:0009881,1.53e-11,18;UBERON:0004141,1.53e-11,18;UBERON:0003084,1.53e-11,18;UBERON:0007005,1.53e-11,18;UBERON:0004139,1.53e-11,18;UBERON:0004291,1.53e-11,18;UBERON:0005153,2.91e-10,17;UBERON:0005178,2.91e-10,17;UBERON:0005181,2.91e-10,17;UBERON:0002224,2.91e-10,17;UBERON:0000915,2.91e-10,17;UBERON:0008947,2.91e-10,17;UBERON:0003258,2.91e-10,17;UBERON:0005177,3.80e-10,79;UBERON:0004872,1.82e-09,33;UBERON:0005157,1.87e-08,20;UBERON:0009569,2.45e-08,66;UBERON:0000025,2.86e-07,114 | |||
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| ||
|short_description=p7@Rbms2 | |short_description=p7@Rbms2 | ||
}} | }} |
Revision as of 05:33, 15 November 2012
Short description: | p7@Rbms2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rbms2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1227 |
Association with transcript: | 78bp_to_ENSMUST00000099139, NM_001039080, uc007hln.1_5end |
EntrezGene: | Rbms2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.16e-09 | 7 |
cardiocyte | 1.79e-08 | 3 |
striated muscle cell | 1.79e-08 | 3 |
cardiac muscle cell | 1.79e-08 | 3 |
cardiac muscle myoblast | 1.79e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung | 7.47e-13 | 14 |
respiratory tube | 7.47e-13 | 14 |
respiration organ | 7.47e-13 | 14 |
pair of lungs | 7.47e-13 | 14 |
lung primordium | 7.47e-13 | 14 |
lung bud | 7.47e-13 | 14 |
trunk | 8.54e-13 | 90 |
cardiovascular system | 1.44e-12 | 23 |
circulatory system | 1.44e-12 | 23 |
primary circulatory organ | 1.53e-11 | 18 |
heart | 1.53e-11 | 18 |
primitive heart tube | 1.53e-11 | 18 |
primary heart field | 1.53e-11 | 18 |
anterior lateral plate mesoderm | 1.53e-11 | 18 |
heart tube | 1.53e-11 | 18 |
heart primordium | 1.53e-11 | 18 |
cardiac mesoderm | 1.53e-11 | 18 |
cardiogenic plate | 1.53e-11 | 18 |
heart rudiment | 1.53e-11 | 18 |
epithelial bud | 2.91e-10 | 17 |
thoracic cavity element | 2.91e-10 | 17 |
thoracic segment organ | 2.91e-10 | 17 |
thoracic cavity | 2.91e-10 | 17 |
thoracic segment of trunk | 2.91e-10 | 17 |
respiratory primordium | 2.91e-10 | 17 |
endoderm of foregut | 2.91e-10 | 17 |
trunk region element | 3.80e-10 | 79 |
splanchnic layer of lateral plate mesoderm | 1.82e-09 | 33 |
epithelial fold | 1.87e-08 | 20 |
subdivision of trunk | 2.45e-08 | 66 |
tube | 2.86e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.