FFCP PHASE1:Mm9::chr11:103510892..103510899,+: Difference between revisions
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|id=chr11:103510892..103510899,+ | |id=chr11:103510892..103510899,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!6.29e-29!10;UBERON:0000411!6.29e-29!10;UBERON:0001950!6.29e-29!10;UBERON:0002619!2.37e-23!17;UBERON:0002791!1.48e-22!29;UBERON:0003528!1.48e-22!29;UBERON:0001893!1.48e-22!29;UBERON:0000956!1.24e-21!21;UBERON:0001869!1.24e-21!21;UBERON:0000203!1.24e-21!21;UBERON:0000955!7.32e-21!50;UBERON:0006238!7.32e-21!50;UBERON:0002616!3.48e-19!49;UBERON:0002020!1.06e-18!34;UBERON:0002780!3.93e-18!39;UBERON:0001890!3.93e-18!39;UBERON:0006240!3.93e-18!39;UBERON:0003080!1.40e-17!40;UBERON:0000033!1.38e-15!63;UBERON:0001049!2.85e-14!52;UBERON:0005068!2.85e-14!52;UBERON:0006241!2.85e-14!52;UBERON:0007135!2.85e-14!52;UBERON:0003056!1.22e-13!49;UBERON:0001017!8.26e-13!73;UBERON:0005743!8.26e-13!73;UBERON:0000073!2.42e-12!75;UBERON:0001016!2.42e-12!75;UBERON:0007811!3.61e-10!86;UBERON:0002346!2.27e-09!71;UBERON:0003075!2.27e-09!71;UBERON:0007284!2.27e-09!71;UBERON:0000153!6.54e-09!94;UBERON:0004121!7.48e-08!102;UBERON:0000924!7.48e-08!102;UBERON:0006601!7.48e-08!102 | |ontology_enrichment_uberon=UBERON:0002021!6.29e-29!10;UBERON:0000411!6.29e-29!10;UBERON:0001950!6.29e-29!10;UBERON:0002619!2.37e-23!17;UBERON:0002791!1.48e-22!29;UBERON:0003528!1.48e-22!29;UBERON:0001893!1.48e-22!29;UBERON:0000956!1.24e-21!21;UBERON:0001869!1.24e-21!21;UBERON:0000203!1.24e-21!21;UBERON:0000955!7.32e-21!50;UBERON:0006238!7.32e-21!50;UBERON:0002616!3.48e-19!49;UBERON:0002020!1.06e-18!34;UBERON:0002780!3.93e-18!39;UBERON:0001890!3.93e-18!39;UBERON:0006240!3.93e-18!39;UBERON:0003080!1.40e-17!40;UBERON:0000033!1.38e-15!63;UBERON:0001049!2.85e-14!52;UBERON:0005068!2.85e-14!52;UBERON:0006241!2.85e-14!52;UBERON:0007135!2.85e-14!52;UBERON:0003056!1.22e-13!49;UBERON:0001017!8.26e-13!73;UBERON:0005743!8.26e-13!73;UBERON:0000073!2.42e-12!75;UBERON:0001016!2.42e-12!75;UBERON:0007811!3.61e-10!86;UBERON:0002346!2.27e-09!71;UBERON:0003075!2.27e-09!71;UBERON:0007284!2.27e-09!71;UBERON:0000153!6.54e-09!94;UBERON:0004121!7.48e-08!102;UBERON:0000924!7.48e-08!102;UBERON:0006601!7.48e-08!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,5.92e-59,10;UBERON:0000411,5.92e-59,10;UBERON:0001950,5.92e-59,10;UBERON:0002619,1.38e-42,17;UBERON:0000956,2.32e-34,21;UBERON:0001869,2.32e-34,21;UBERON:0000203,2.32e-34,21;UBERON:0003528,1.06e-24,29;UBERON:0002791,1.06e-24,29;UBERON:0001893,1.06e-24,29;UBERON:0002780,5.03e-22,39;UBERON:0001890,5.03e-22,39;UBERON:0006240,5.03e-22,39;UBERON:0003080,1.87e-21,40;UBERON:0002020,5.81e-21,34;UBERON:0002616,1.50e-18,46;UBERON:0000955,3.88e-18,47;UBERON:0006238,3.88e-18,47;UBERON:0003056,2.31e-17,49;UBERON:0001049,2.60e-16,52;UBERON:0005068,2.60e-16,52;UBERON:0006241,2.60e-16,52;UBERON:0007135,2.60e-16,52;UBERON:0000073,1.13e-15,54;UBERON:0002346,4.38e-13,64;UBERON:0003075,4.38e-13,64;UBERON:0007284,4.38e-13,64;UBERON:0010371,2.35e-11,73;UBERON:0001017,2.35e-11,73;UBERON:0001016,5.02e-11,75;UBERON:0010314,8.41e-09,92;UBERON:0004121,1.72e-08,95;UBERON:0000924,1.72e-08,95;UBERON:0006601,1.72e-08,95;UBERON:0000025,6.81e-07,114 | |||
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|short_description=p5@Rprml | |short_description=p5@Rprml | ||
}} | }} |
Revision as of 04:31, 15 November 2012
Short description: | p5@Rprml |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rprml_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 69bp_to_ENSMUST00000057870, NM_001033212, uc007lvn.1_5end |
EntrezGene: | Rprml |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 5.92e-59 | 10 |
visual cortex | 5.92e-59 | 10 |
neocortex | 5.92e-59 | 10 |
regional part of cerebral cortex | 1.38e-42 | 17 |
cerebral cortex | 2.32e-34 | 21 |
cerebral hemisphere | 2.32e-34 | 21 |
pallium | 2.32e-34 | 21 |
brain grey matter | 1.06e-24 | 29 |
regional part of telencephalon | 1.06e-24 | 29 |
telencephalon | 1.06e-24 | 29 |
regional part of forebrain | 5.03e-22 | 39 |
forebrain | 5.03e-22 | 39 |
future forebrain | 5.03e-22 | 39 |
anterior neural tube | 1.87e-21 | 40 |
gray matter | 5.81e-21 | 34 |
regional part of brain | 1.50e-18 | 46 |
brain | 3.88e-18 | 47 |
future brain | 3.88e-18 | 47 |
pre-chordal neural plate | 2.31e-17 | 49 |
neural tube | 2.60e-16 | 52 |
neural rod | 2.60e-16 | 52 |
future spinal cord | 2.60e-16 | 52 |
neural keel | 2.60e-16 | 52 |
regional part of nervous system | 1.13e-15 | 54 |
neurectoderm | 4.38e-13 | 64 |
neural plate | 4.38e-13 | 64 |
presumptive neural plate | 4.38e-13 | 64 |
ecto-epithelium | 2.35e-11 | 73 |
central nervous system | 2.35e-11 | 73 |
nervous system | 5.02e-11 | 75 |
structure with developmental contribution from neural crest | 8.41e-09 | 92 |
ectoderm-derived structure | 1.72e-08 | 95 |
ectoderm | 1.72e-08 | 95 |
presumptive ectoderm | 1.72e-08 | 95 |
tube | 6.81e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.