FFCP PHASE1:Mm9::chr3:72870267..72870281,+: Difference between revisions
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|id=chr3:72870267..72870281,+ | |id=chr3:72870267..72870281,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000540!2.17e-07!33;CL:0000047!2.17e-07!33;CL:0000031!2.17e-07!33;CL:0000404!2.17e-07!33 | |ontology_enrichment_celltype=CL:0000117!3.48e-09!23;CL:0000337!3.48e-09!23;CL:0000540!2.17e-07!33;CL:0000047!2.17e-07!33;CL:0000031!2.17e-07!33;CL:0000404!2.17e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.01e-07,23;CL:0000337,1.01e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.54e-16!34;UBERON:0002346!4.34e-16!71;UBERON:0003075!4.34e-16!71;UBERON:0007284!4.34e-16!71;UBERON:0003056!3.20e-15!49;UBERON:0000033!9.34e-14!63;UBERON:0004121!9.64e-14!102;UBERON:0000924!9.64e-14!102;UBERON:0006601!9.64e-14!102;UBERON:0002791!2.31e-13!29;UBERON:0003528!2.31e-13!29;UBERON:0001893!2.31e-13!29;UBERON:0001049!3.27e-13!52;UBERON:0005068!3.27e-13!52;UBERON:0006241!3.27e-13!52;UBERON:0007135!3.27e-13!52;UBERON:0001017!1.20e-12!73;UBERON:0005743!1.20e-12!73;UBERON:0000073!2.45e-12!75;UBERON:0001016!2.45e-12!75;UBERON:0003080!3.45e-12!40;UBERON:0002780!1.01e-11!39;UBERON:0001890!1.01e-11!39;UBERON:0006240!1.01e-11!39;UBERON:0002619!1.79e-10!17;UBERON:0000955!1.81e-10!50;UBERON:0006238!1.81e-10!50;UBERON:0002616!2.71e-10!49;UBERON:0000956!9.89e-10!21;UBERON:0001869!9.89e-10!21;UBERON:0000203!9.89e-10!21;UBERON:0002021!3.20e-09!10;UBERON:0000411!3.20e-09!10;UBERON:0001950!3.20e-09!10 | |ontology_enrichment_uberon=UBERON:0002020!1.54e-16!34;UBERON:0002346!4.34e-16!71;UBERON:0003075!4.34e-16!71;UBERON:0007284!4.34e-16!71;UBERON:0003056!3.20e-15!49;UBERON:0000033!9.34e-14!63;UBERON:0004121!9.64e-14!102;UBERON:0000924!9.64e-14!102;UBERON:0006601!9.64e-14!102;UBERON:0002791!2.31e-13!29;UBERON:0003528!2.31e-13!29;UBERON:0001893!2.31e-13!29;UBERON:0001049!3.27e-13!52;UBERON:0005068!3.27e-13!52;UBERON:0006241!3.27e-13!52;UBERON:0007135!3.27e-13!52;UBERON:0001017!1.20e-12!73;UBERON:0005743!1.20e-12!73;UBERON:0000073!2.45e-12!75;UBERON:0001016!2.45e-12!75;UBERON:0003080!3.45e-12!40;UBERON:0002780!1.01e-11!39;UBERON:0001890!1.01e-11!39;UBERON:0006240!1.01e-11!39;UBERON:0002619!1.79e-10!17;UBERON:0000955!1.81e-10!50;UBERON:0006238!1.81e-10!50;UBERON:0002616!2.71e-10!49;UBERON:0000956!9.89e-10!21;UBERON:0001869!9.89e-10!21;UBERON:0000203!9.89e-10!21;UBERON:0002021!3.20e-09!10;UBERON:0000411!3.20e-09!10;UBERON:0001950!3.20e-09!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.60e-23,34;UBERON:0002619,3.32e-21,17;UBERON:0003528,3.14e-19,29;UBERON:0002791,3.14e-19,29;UBERON:0001893,3.14e-19,29;UBERON:0000956,2.25e-18,21;UBERON:0001869,2.25e-18,21;UBERON:0000203,2.25e-18,21;UBERON:0003056,9.06e-18,49;UBERON:0002021,3.88e-17,10;UBERON:0000411,3.88e-17,10;UBERON:0001950,3.88e-17,10;UBERON:0002346,5.34e-17,64;UBERON:0003075,5.34e-17,64;UBERON:0007284,5.34e-17,64;UBERON:0001049,9.55e-17,52;UBERON:0005068,9.55e-17,52;UBERON:0006241,9.55e-17,52;UBERON:0007135,9.55e-17,52;UBERON:0003080,1.55e-16,40;UBERON:0000073,7.72e-16,54;UBERON:0002780,1.12e-15,39;UBERON:0001890,1.12e-15,39;UBERON:0006240,1.12e-15,39;UBERON:0010371,4.53e-15,73;UBERON:0002616,1.62e-13,46;UBERON:0000955,4.31e-13,47;UBERON:0006238,4.31e-13,47;UBERON:0001017,6.75e-12,73;UBERON:0004121,1.75e-11,95;UBERON:0000924,1.75e-11,95;UBERON:0006601,1.75e-11,95;UBERON:0001016,2.28e-11,75;UBERON:0010314,3.63e-10,92 | |||
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| ||
|short_description=p2@LOC626082 | |short_description=p2@LOC626082 | ||
}} | }} |
Revision as of 04:17, 15 November 2012
Short description: | p2@LOC626082 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC626082_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_NR_040557, uc008pmu.1_5end |
EntrezGene: | LOC626082 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.01e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.01e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
gray matter | 1.60e-23 | 34 |
regional part of cerebral cortex | 3.32e-21 | 17 |
brain grey matter | 3.14e-19 | 29 |
regional part of telencephalon | 3.14e-19 | 29 |
telencephalon | 3.14e-19 | 29 |
cerebral cortex | 2.25e-18 | 21 |
cerebral hemisphere | 2.25e-18 | 21 |
pallium | 2.25e-18 | 21 |
pre-chordal neural plate | 9.06e-18 | 49 |
occipital lobe | 3.88e-17 | 10 |
visual cortex | 3.88e-17 | 10 |
neocortex | 3.88e-17 | 10 |
neurectoderm | 5.34e-17 | 64 |
neural plate | 5.34e-17 | 64 |
presumptive neural plate | 5.34e-17 | 64 |
neural tube | 9.55e-17 | 52 |
neural rod | 9.55e-17 | 52 |
future spinal cord | 9.55e-17 | 52 |
neural keel | 9.55e-17 | 52 |
anterior neural tube | 1.55e-16 | 40 |
regional part of nervous system | 7.72e-16 | 54 |
regional part of forebrain | 1.12e-15 | 39 |
forebrain | 1.12e-15 | 39 |
future forebrain | 1.12e-15 | 39 |
ecto-epithelium | 4.53e-15 | 73 |
regional part of brain | 1.62e-13 | 46 |
brain | 4.31e-13 | 47 |
future brain | 4.31e-13 | 47 |
central nervous system | 6.75e-12 | 73 |
ectoderm-derived structure | 1.75e-11 | 95 |
ectoderm | 1.75e-11 | 95 |
presumptive ectoderm | 1.75e-11 | 95 |
nervous system | 2.28e-11 | 75 |
structure with developmental contribution from neural crest | 3.63e-10 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.