FFCP PHASE1:Mm9::chr15:81230483..81230523,-: Difference between revisions
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|id=chr15:81230483..81230523,- | |id=chr15:81230483..81230523,- | ||
|ontology_enrichment_celltype=CL:0000117!1.08e-09!23;CL:0000337!1.08e-09!23;CL:0000540!1.56e-08!33;CL:0000047!1.56e-08!33;CL:0000031!1.56e-08!33;CL:0000404!1.56e-08!33 | |ontology_enrichment_celltype=CL:0000117!1.08e-09!23;CL:0000337!1.08e-09!23;CL:0000540!1.56e-08!33;CL:0000047!1.56e-08!33;CL:0000031!1.56e-08!33;CL:0000404!1.56e-08!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.04e-09,23;CL:0000337,1.04e-09,23;CL:0000540,1.51e-08,33;CL:0000047,1.51e-08,33;CL:0000031,1.51e-08,33;CL:0000404,1.51e-08,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!4.92e-17!63;UBERON:0000955!2.31e-16!50;UBERON:0006238!2.31e-16!50;UBERON:0001017!5.03e-16!73;UBERON:0005743!5.03e-16!73;UBERON:0003056!5.11e-16!49;UBERON:0002616!8.86e-16!49;UBERON:0000073!1.60e-15!75;UBERON:0001016!1.60e-15!75;UBERON:0001049!1.86e-15!52;UBERON:0005068!1.86e-15!52;UBERON:0006241!1.86e-15!52;UBERON:0007135!1.86e-15!52;UBERON:0002346!3.69e-15!71;UBERON:0003075!3.69e-15!71;UBERON:0007284!3.69e-15!71;UBERON:0003080!4.22e-15!40;UBERON:0002780!1.19e-14!39;UBERON:0001890!1.19e-14!39;UBERON:0006240!1.19e-14!39;UBERON:0007811!2.52e-14!86;UBERON:0000153!6.12e-14!94;UBERON:0002020!1.29e-13!34;UBERON:0002791!3.03e-13!29;UBERON:0003528!3.03e-13!29;UBERON:0001893!3.03e-13!29;UBERON:0004121!7.84e-13!102;UBERON:0000924!7.84e-13!102;UBERON:0006601!7.84e-13!102;UBERON:0000956!7.95e-10!21;UBERON:0001869!7.95e-10!21;UBERON:0000203!7.95e-10!21;UBERON:0002619!1.77e-07!17;UBERON:0002021!5.80e-07!10;UBERON:0000411!5.80e-07!10;UBERON:0001950!5.80e-07!10;UBERON:0000025!6.79e-07!114 | |ontology_enrichment_uberon=UBERON:0000033!4.92e-17!63;UBERON:0000955!2.31e-16!50;UBERON:0006238!2.31e-16!50;UBERON:0001017!5.03e-16!73;UBERON:0005743!5.03e-16!73;UBERON:0003056!5.11e-16!49;UBERON:0002616!8.86e-16!49;UBERON:0000073!1.60e-15!75;UBERON:0001016!1.60e-15!75;UBERON:0001049!1.86e-15!52;UBERON:0005068!1.86e-15!52;UBERON:0006241!1.86e-15!52;UBERON:0007135!1.86e-15!52;UBERON:0002346!3.69e-15!71;UBERON:0003075!3.69e-15!71;UBERON:0007284!3.69e-15!71;UBERON:0003080!4.22e-15!40;UBERON:0002780!1.19e-14!39;UBERON:0001890!1.19e-14!39;UBERON:0006240!1.19e-14!39;UBERON:0007811!2.52e-14!86;UBERON:0000153!6.12e-14!94;UBERON:0002020!1.29e-13!34;UBERON:0002791!3.03e-13!29;UBERON:0003528!3.03e-13!29;UBERON:0001893!3.03e-13!29;UBERON:0004121!7.84e-13!102;UBERON:0000924!7.84e-13!102;UBERON:0006601!7.84e-13!102;UBERON:0000956!7.95e-10!21;UBERON:0001869!7.95e-10!21;UBERON:0000203!7.95e-10!21;UBERON:0002619!1.77e-07!17;UBERON:0002021!5.80e-07!10;UBERON:0000411!5.80e-07!10;UBERON:0001950!5.80e-07!10;UBERON:0000025!6.79e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.87e-17,64;UBERON:0003075,4.87e-17,64;UBERON:0007284,4.87e-17,64;UBERON:0000073,1.62e-16,54;UBERON:0003056,4.72e-16,49;UBERON:0001017,5.11e-16,73;UBERON:0001049,1.56e-15,52;UBERON:0005068,1.56e-15,52;UBERON:0006241,1.56e-15,52;UBERON:0007135,1.56e-15,52;UBERON:0001016,1.62e-15,75;UBERON:0003080,3.92e-15,40;UBERON:0010314,5.43e-15,92;UBERON:0000955,8.29e-15,47;UBERON:0006238,8.29e-15,47;UBERON:0002780,1.11e-14,39;UBERON:0001890,1.11e-14,39;UBERON:0006240,1.11e-14,39;UBERON:0002616,3.08e-14,46;UBERON:0010371,4.25e-14,73;UBERON:0004121,7.48e-14,95;UBERON:0000924,7.48e-14,95;UBERON:0006601,7.48e-14,95;UBERON:0002020,1.21e-13,34;UBERON:0003528,2.84e-13,29;UBERON:0002791,2.84e-13,29;UBERON:0001893,2.84e-13,29;UBERON:0000956,7.60e-10,21;UBERON:0001869,7.60e-10,21;UBERON:0000203,7.60e-10,21;UBERON:0002619,1.72e-07,17;UBERON:0002021,5.63e-07,10;UBERON:0000411,5.63e-07,10;UBERON:0001950,5.63e-07,10;UBERON:0000025,7.02e-07,114 | |||
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| ||
|short_description=p4@St13 | |short_description=p4@St13 | ||
}} | }} |
Revision as of 00:59, 15 November 2012
Short description: | p4@St13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_St13_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000163382, ENSMUST00000169204, uc007wwm.1_5end |
EntrezGene: | St13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.04e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.04e-09 | 23 |
neuron | 1.51e-08 | 33 |
neuronal stem cell | 1.51e-08 | 33 |
neuroblast | 1.51e-08 | 33 |
electrically signaling cell | 1.51e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.87e-17 | 64 |
neural plate | 4.87e-17 | 64 |
presumptive neural plate | 4.87e-17 | 64 |
regional part of nervous system | 1.62e-16 | 54 |
pre-chordal neural plate | 4.72e-16 | 49 |
central nervous system | 5.11e-16 | 73 |
neural tube | 1.56e-15 | 52 |
neural rod | 1.56e-15 | 52 |
future spinal cord | 1.56e-15 | 52 |
neural keel | 1.56e-15 | 52 |
nervous system | 1.62e-15 | 75 |
anterior neural tube | 3.92e-15 | 40 |
structure with developmental contribution from neural crest | 5.43e-15 | 92 |
brain | 8.29e-15 | 47 |
future brain | 8.29e-15 | 47 |
regional part of forebrain | 1.11e-14 | 39 |
forebrain | 1.11e-14 | 39 |
future forebrain | 1.11e-14 | 39 |
regional part of brain | 3.08e-14 | 46 |
ecto-epithelium | 4.25e-14 | 73 |
ectoderm-derived structure | 7.48e-14 | 95 |
ectoderm | 7.48e-14 | 95 |
presumptive ectoderm | 7.48e-14 | 95 |
gray matter | 1.21e-13 | 34 |
brain grey matter | 2.84e-13 | 29 |
regional part of telencephalon | 2.84e-13 | 29 |
telencephalon | 2.84e-13 | 29 |
cerebral cortex | 7.60e-10 | 21 |
cerebral hemisphere | 7.60e-10 | 21 |
pallium | 7.60e-10 | 21 |
regional part of cerebral cortex | 1.72e-07 | 17 |
occipital lobe | 5.63e-07 | 10 |
visual cortex | 5.63e-07 | 10 |
neocortex | 5.63e-07 | 10 |
tube | 7.02e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.