Personal tools

FFCP PHASE1:Mm9::chr7:4397239..4397264,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr7:4397239..4397264,-
|id=chr7:4397239..4397264,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=6.72625157840135,7.67745896806594,5.91499011206397,6.95667686005709,9.5170188689806,12.0873075776561,10.0453435456076,3.87369970324729,7.74337971834167,9.36258105287974,9.93064215707929,10.2108363514031,4.79362043807376,3.2345548895029,4.99664642723494,3.44207954562704,5.59649502502517,3.62781490161973,4.11343300817216,3.81950686618227,4.84746753861098,3.77305614563364,3.91799683708403,9.5995453676044,6.8822784320151,10.3361753540704,10.3382879078178,8.40337807474967,5.89072600314759,11.8454160987167,14.4124831925948,11.4305521222734,20.2971379902908,0,10.6875099307972,10.9714865936605,10.6168065256432,0,0,0.523523743973798,0,0,0.485510353031154,3.9028013572429,3.85232338634155,4.22157529971868,1.56478268869608,7.84890562969608,3.73466510648602,5.63846707315422,4.33957907038624,5.75010257459886,2.68452169692378,2.90144856804538,4.36921938885203,3.34437266846731,6.30373567865265,2.06268836910977,11.5320382689971,10.0508286061686,9.50747105259269,6.09920157724438,3.55717918444456,6.29929802096979,6.92206453796882,2.8419204597844,2.39680088414724,4.99483796918021,14.7239249478038,11.7455166348571,10.9368979902719,8.2838785477103,7.28866185140325,11.1466627285608,12.0765293482978,10.1114066527102,7.70811166995721,4.59674417106676,5.37622866396852,10.2871304429551,11.2529801630964,11.4600941522487,5.862842979029,8.4414391504752,4.5839474333043,11.7851434189467,6.97621235915604,7.82877672466262,10.9802980333117,4.00529268565963,10.4351215932604,3.44169550792555,4.75979933595425,10.2543606411185,9.09686984426737,7.16843019355737,5.75822122540183,3.40860645156115,4.67614808285164,2.12003744706204,6.05626705039726,2.56652954828636,2.54805239706646,0,4.32982082022428,4.56047757855178,4.04419556011827,7.4219521817389,6.47344709117929,4.45326417194474,6.41895709034703,6.69824052286711,8.30215790121811,7.23468674652588,8.70156432804216,5.6549966098354,6.42706916109372,12.1463459812726,4.42305275974937,5.66183974815932,6.40440403535141,3.87900202508178,3.72783522436244,14.0534782565543,9.42510180660548,7.91916871146633,3.95389910869537,4.79922184794726,4.19331749341113,6.14141621559773,5.03250663100489,13.8219787324151,6.08385120672968,5.62574006126727,7.68815764870372,4.86723789203273,7.63795228877372,7.0911973247753,6.06534620240819,7.99679052368601,8.97831056442656,7.58676944630461,7.56260945182467,7.9873553452929,7.0757959117381,8.58361925908494,7.21503279109912,9.05461797586555,7.97601573851516,8.88798576788751,11.2608719464927,6.1374805079721,7.50727572909114,7.3132954969655,9.05441400194951,9.35461054046918,4.91549231119264,5.66165395652373,4.54661599032948,11.8061690345236,7.50483391939508,10.9837857491219,9.94327889457883,7.08351234290654,8.94749254746794,11.1616293480196,13.1453966685813,13.3112490298573,12.5065485934245,12.3125598059321,10.5389452409612,8.18719929581861,11.6361561104257,9.5286557319864,8.41159794256509,12.9659811597898,6.27795687669216,7.93351699990633,7.67837701926842,7.19933682767359,10.1805294444454,9.07575860805041,11.1189021922435,6.65789691393957,5.69434873853414,8.39964669092456,4.27269854960458,5.37182474511107,9.35827618171777,10.7858329038507,6.26800344636613,11.948476395262,7.96605184002943,6.740662243974,10.1436962105772,6.92414514674068,7.95205197387266,9.8190147846446,7.90456714053216,8.41377843483732,8.47793130343424,6.78684401569903,5.03969466048153,4.33797274861845,2.55526693647164,4.72210436008193,2.23146133527353,3.37648023653384,2.80088436959562,7.19240343627027,13.4572238223279,6.31491250332587,8.62609239164127,5.20997326735905,6.24075346229121,6.06189307073068,6.27890947326693,9.16642690590398,4.43407656399851,7.39016505904891,9.28900365719548,7.29903868833309,7.97946844180907,7.87279409976534,6.66522194480839,11.3177515757523,6.14777062014145,5.53661724121937,7.97273843287435,6.71839590334526,6.90739927463582,4.05017364028232,1.50791283939272,3.80733978673097,2.95058563811422,7.45029215022778,5.13761887960934,5.39173758324135,5.73772308818364,6.05930225290495,7.2566890465739,5.85658116444958,8.61693590931196,6.4521575447189,8.02075226696619,6.79383673893198,5.66734982344852,8.47541987942804,11.4633455604492,9.3183181762324,5.25178315270594,5.34196811001766,6.8412522928502,6.26886467295635,9.2921596837974,8.98288353773431,7.25576536715402,6.22396763194464,5.31543407185391,2.76691633149535,5.94385074286909,6.5436071305951,4.63446591900138,6.63677191665214,5.27093042874994,4.12542172992747,3.74483566329167,9.18311579559682,9.31382523235832,6.21577401591618,7.62563004661776,6.59964625127661,6.08831376227848,8.52501857520878,10.560226862867,8.26145076368899,5.29268155331909,12.5313552235525,10.8181165886257,10.072258463002,8.59480876822583,7.2221995887827,6.12109756922687,4.45020724825223,3.41741761595705,5.98521917093345,6.11141940320049,4.89757988212197,4.10082683163076,4.11800711771741,2.71965487990169,2.6590775941495,3.17859939750175,16.2294005062569,9.49007980743406,8.94605655358134,7.77638453916969,10.245326504709,7.42432716737004,11.1937407499401,11.4888303458217,13.6113089831695,6.09190374471426,4.97071450469541,2.25477175473676,10.0176085849466,9.43113395605456,7.77804753376191,7.36210993823067,6.75824501963113,8.09764946655702,9.63512447845231,5.66240459898839,3.38217769156408,1.72818003754719,3.47612232690996,5.47358081283443,5.13554785824136,4.93699127315621,4.65469408735452,3.17890167650024,4.20684073319891,3.39685912501528,4.54349024766664,4.95344243257499,4.03304740547362,3.60594158737084,3.75226182397285,7.01261413089414,7.9355634265324,11.5432695754514,10.6759489365276,14.1023077745826,7.14801497919105,5.81815673898664,6.22715522508701,6.43105137237198,5.01572104035363,5.0827665835536,7.82552902062201,6.87474616127276,6.01486138202907,3.42541259885321,7.55393897389701,9.45031500324528,2.2516060161211,5.89085131679466,5.69536342927002,9.3408612825759,9.17757208822371,9.90254913373978,7.77941494618541,4.19226325255965,6.61836630420051,7.77863547305653,8.44743734679466,7.38114182061175,6.06473308233114,6.08350319736575,11.8834595073228,8.42773567228942,9.34767225111091,10.395819880966,12.3836359733599,9.73428337936786,10.9958255664312,4.53294490883637,7.94874168725746,7.54312355247914,7.45398385869217,11.921809497366,7.55801366488108,9.50504742194839,8.12300235760094,10.0610385080025,11.8381370147029,9.64209208305619,6.73370725989286,7.94854621431967,7.19082721341613,6.95692773388472,8.83139994760006,6.36591816237767,5.74564329257276,6.78401664491684,9.23945532407683,10.1382815996487,6.17655973534643,8.57910991795559
|phase1_expression=6.72625157840135,7.67745896806594,5.91499011206397,6.95667686005709,9.5170188689806,12.0873075776561,10.0453435456076,3.87369970324729,7.74337971834167,9.36258105287974,9.93064215707929,10.2108363514031,4.79362043807376,3.2345548895029,4.99664642723494,3.44207954562704,5.59649502502517,3.62781490161973,4.11343300817216,3.81950686618227,4.84746753861098,3.77305614563364,3.91799683708403,9.5995453676044,6.8822784320151,10.3361753540704,10.3382879078178,8.40337807474967,5.89072600314759,11.8454160987167,14.4124831925948,11.4305521222734,20.2971379902908,0,10.6875099307972,10.9714865936605,10.6168065256432,0,0,0.523523743973798,0,0,0.485510353031154,3.9028013572429,3.85232338634155,4.22157529971868,1.56478268869608,7.84890562969608,3.73466510648602,5.63846707315422,4.33957907038624,5.75010257459886,2.68452169692378,2.90144856804538,4.36921938885203,3.34437266846731,6.30373567865265,2.06268836910977,11.5320382689971,10.0508286061686,9.50747105259269,6.09920157724438,3.55717918444456,6.29929802096979,6.92206453796882,2.8419204597844,2.39680088414724,4.99483796918021,14.7239249478038,11.7455166348571,10.9368979902719,8.2838785477103,7.28866185140325,11.1466627285608,12.0765293482978,10.1114066527102,7.70811166995721,4.59674417106676,5.37622866396852,10.2871304429551,11.2529801630964,11.4600941522487,5.862842979029,8.4414391504752,4.5839474333043,11.7851434189467,6.97621235915604,7.82877672466262,10.9802980333117,4.00529268565963,10.4351215932604,3.44169550792555,4.75979933595425,10.2543606411185,9.09686984426737,7.16843019355737,5.75822122540183,3.40860645156115,4.67614808285164,2.12003744706204,6.05626705039726,2.56652954828636,2.54805239706646,0,4.32982082022428,4.56047757855178,4.04419556011827,7.4219521817389,6.47344709117929,4.45326417194474,6.41895709034703,6.69824052286711,8.30215790121811,7.23468674652588,8.70156432804216,5.6549966098354,6.42706916109372,12.1463459812726,4.42305275974937,5.66183974815932,6.40440403535141,3.87900202508178,3.72783522436244,14.0534782565543,9.42510180660548,7.91916871146633,3.95389910869537,4.79922184794726,4.19331749341113,6.14141621559773,5.03250663100489,13.8219787324151,6.08385120672968,5.62574006126727,7.68815764870372,4.86723789203273,7.63795228877372,7.0911973247753,6.06534620240819,7.99679052368601,8.97831056442656,7.58676944630461,7.56260945182467,7.9873553452929,7.0757959117381,8.58361925908494,7.21503279109912,9.05461797586555,7.97601573851516,8.88798576788751,11.2608719464927,6.1374805079721,7.50727572909114,7.3132954969655,9.05441400194951,9.35461054046918,4.91549231119264,5.66165395652373,4.54661599032948,11.8061690345236,7.50483391939508,10.9837857491219,9.94327889457883,7.08351234290654,8.94749254746794,11.1616293480196,13.1453966685813,13.3112490298573,12.5065485934245,12.3125598059321,10.5389452409612,8.18719929581861,11.6361561104257,9.5286557319864,8.41159794256509,12.9659811597898,6.27795687669216,7.93351699990633,7.67837701926842,7.19933682767359,10.1805294444454,9.07575860805041,11.1189021922435,6.65789691393957,5.69434873853414,8.39964669092456,4.27269854960458,5.37182474511107,9.35827618171777,10.7858329038507,6.26800344636613,11.948476395262,7.96605184002943,6.740662243974,10.1436962105772,6.92414514674068,7.95205197387266,9.8190147846446,7.90456714053216,8.41377843483732,8.47793130343424,6.78684401569903,5.03969466048153,4.33797274861845,2.55526693647164,4.72210436008193,2.23146133527353,3.37648023653384,2.80088436959562,7.19240343627027,13.4572238223279,6.31491250332587,8.62609239164127,5.20997326735905,6.24075346229121,6.06189307073068,6.27890947326693,9.16642690590398,4.43407656399851,7.39016505904891,9.28900365719548,7.29903868833309,7.97946844180907,7.87279409976534,6.66522194480839,11.3177515757523,6.14777062014145,5.53661724121937,7.97273843287435,6.71839590334526,6.90739927463582,4.05017364028232,1.50791283939272,3.80733978673097,2.95058563811422,7.45029215022778,5.13761887960934,5.39173758324135,5.73772308818364,6.05930225290495,7.2566890465739,5.85658116444958,8.61693590931196,6.4521575447189,8.02075226696619,6.79383673893198,5.66734982344852,8.47541987942804,11.4633455604492,9.3183181762324,5.25178315270594,5.34196811001766,6.8412522928502,6.26886467295635,9.2921596837974,8.98288353773431,7.25576536715402,6.22396763194464,5.31543407185391,2.76691633149535,5.94385074286909,6.5436071305951,4.63446591900138,6.63677191665214,5.27093042874994,4.12542172992747,3.74483566329167,9.18311579559682,9.31382523235832,6.21577401591618,7.62563004661776,6.59964625127661,6.08831376227848,8.52501857520878,10.560226862867,8.26145076368899,5.29268155331909,12.5313552235525,10.8181165886257,10.072258463002,8.59480876822583,7.2221995887827,6.12109756922687,4.45020724825223,3.41741761595705,5.98521917093345,6.11141940320049,4.89757988212197,4.10082683163076,4.11800711771741,2.71965487990169,2.6590775941495,3.17859939750175,16.2294005062569,9.49007980743406,8.94605655358134,7.77638453916969,10.245326504709,7.42432716737004,11.1937407499401,11.4888303458217,13.6113089831695,6.09190374471426,4.97071450469541,2.25477175473676,10.0176085849466,9.43113395605456,7.77804753376191,7.36210993823067,6.75824501963113,8.09764946655702,9.63512447845231,5.66240459898839,3.38217769156408,1.72818003754719,3.47612232690996,5.47358081283443,5.13554785824136,4.93699127315621,4.65469408735452,3.17890167650024,4.20684073319891,3.39685912501528,4.54349024766664,4.95344243257499,4.03304740547362,3.60594158737084,3.75226182397285,7.01261413089414,7.9355634265324,11.5432695754514,10.6759489365276,14.1023077745826,7.14801497919105,5.81815673898664,6.22715522508701,6.43105137237198,5.01572104035363,5.0827665835536,7.82552902062201,6.87474616127276,6.01486138202907,3.42541259885321,7.55393897389701,9.45031500324528,2.2516060161211,5.89085131679466,5.69536342927002,9.3408612825759,9.17757208822371,9.90254913373978,7.77941494618541,4.19226325255965,6.61836630420051,7.77863547305653,8.44743734679466,7.38114182061175,6.06473308233114,6.08350319736575,11.8834595073228,8.42773567228942,9.34767225111091,10.395819880966,12.3836359733599,9.73428337936786,10.9958255664312,4.53294490883637,7.94874168725746,7.54312355247914,7.45398385869217,11.921809497366,7.55801366488108,9.50504742194839,8.12300235760094,10.0610385080025,11.8381370147029,9.64209208305619,6.73370725989286,7.94854621431967,7.19082721341613,6.95692773388472,8.83139994760006,6.36591816237767,5.74564329257276,6.78401664491684,9.23945532407683,10.1382815996487,6.17655973534643,8.57910991795559
|short_description=p1@Rdh13
|short_description=p1@Rdh13
}}
}}

Revision as of 00:56, 15 November 2012

Short description:p1@Rdh13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rdh13_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000008579, ENSMUST00000128299, NM_175372, uc009exl.2, uc009exm.2_5end
EntrezGene:Rdh13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rdh13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.68
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.09
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I810.05
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.93
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.21
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.79
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I110.34
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B95.89
Ileum epithelium, pool2.CNhs13232.10253-104C111.85
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.22
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.64
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.29
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.15
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.83
Mouse Schwann, donor1.CNhs12507.11728-123D910.98
Mouse Schwann, donor2.CNhs12573.11746-123F94.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.42
accessory axillary lymph node, adult.CNhs10475.1063-29H96.47
adrenal gland, adult.CNhs10508.49-24D74.45
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I18.30
adrenal gland, embryo E18.CNhs11026.1262-18F57.23
adrenal gland, neonate N00.CNhs11191.1311-23C18.70
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H112.15
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H77.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.19
corpora quadrigemina, adult.CNhs10501.16-22A46.14
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F113.82
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B24.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.09
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G48.00
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C97.56
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C67.08
eyeball, neonate N01.CNhs11140.1532-43E78.58
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E27.98
forelimb, embryo E12.CNhs10600.359-14H28.89
forelimb, embryo E13.CNhs10589.384-1E211.26
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B59.05
gonad, embryo E13.CNhs11044.1564-45I69.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.55
heart, embryo E11.CNhs10586.331-24E911.81
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I910.98
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C87.08
heart, embryo E16.CNhs11021.457-17C68.95
heart, embryo E17.CNhs11025.479-18E511.16
heart, embryo E18.CNhs11030.1283-20G313.15
heart, neonate N00.CNhs11213.639-21E313.31
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G112.31
heart, neonate N16.CNhs11209.782-15G110.54
heart, neonate N20.CNhs11127.821-26I68.19
heart, neonate N25.CNhs11196.1351-25D311.64
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G112.97
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A37.93
intestine, embryo E12.CNhs11019.1251-16I57.68
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D810.18
intestine, embryo E16.CNhs10585.463-22H49.08
intestine, embryo E17.CNhs10582.482-18D311.12
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E98.40
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G111.95
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F86.74
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G79.82
kidney, neonate N10.CNhs11206.758-6D57.90
kidney, neonate N20.CNhs11113.832-19I18.41
kidney, neonate N25.CNhs11122.1353-25F38.48
kidney, neonate N30.CNhs11203.1385-42H16.79
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F84.34
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F413.46
liver, neonate N03.CNhs11123.1345-25G26.31
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H16.28
liver, neonate N30.CNhs11106.1382-42D19.17
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G27.39
lung, embryo E14.CNhs10604.404-26F89.29
lung, embryo E15.CNhs11020.432-17C57.30
lung, embryo E16.CNhs10998.458-17B67.98
lung, embryo E17.CNhs10605.480-44A67.87
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C611.32
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E67.97
lung, neonate N20.CNhs11109.822-18A46.72
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H24.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.46
olfactory brain, adult.CNhs10489.18-22I99.32
ovary, adult.CNhs10507.91-2I75.25
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I46.84
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F27.26
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B66.64
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E69.18
pituitary gland, embryo E13.CNhs11009.370-44C79.31
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G38.26
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G410.82
skin, neonate N03.CNhs11215.662-22H310.07
skin, neonate N06.CNhs11097.693-20I58.59
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H14.10
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E39.49
stomach, embryo E15.CNhs10603.1252-16G88.95
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C67.42
stomach, neonate N03.CNhs11193.1340-24B811.19
stomach, neonate N07.CNhs11210.718-18A911.49
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F510.02
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I57.36
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B78.10
testis, neonate N07.CNhs11222.726-26I49.64
testis, neonate N10.CNhs11204.763-44D95.66
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I45.47
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C14.65
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D34.95
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A23.61
thymus, neonate N25.CNhs11125.1362-25G73.75
thymus, neonate N30.CNhs11132.1393-42G27.01
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.54
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.10
urinary bladder, adult.CNhs10481.879-12E47.15
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D56.43
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I89.34
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H29.90
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F26.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.88
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G512.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.54
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.64
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C610.14
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B48.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:4397239..4397264,-&oldid=2352164"