FFCP PHASE1:Mm9::chr10:109774157..109774160,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr10:109774157..109774160,- | |id=chr10:109774157..109774160,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.07e-15!75;UBERON:0001016!1.07e-15!75;UBERON:0001017!1.61e-15!73;UBERON:0005743!1.61e-15!73;UBERON:0001049!2.64e-15!52;UBERON:0005068!2.64e-15!52;UBERON:0006241!2.64e-15!52;UBERON:0007135!2.64e-15!52;UBERON:0000955!1.83e-14!50;UBERON:0006238!1.83e-14!50;UBERON:0002020!2.66e-14!34;UBERON:0002616!9.42e-14!49;UBERON:0000033!2.41e-13!63;UBERON:0003080!3.22e-13!40;UBERON:0003056!3.38e-13!49;UBERON:0002791!8.61e-13!29;UBERON:0003528!8.61e-13!29;UBERON:0001893!8.61e-13!29;UBERON:0002780!1.43e-12!39;UBERON:0001890!1.43e-12!39;UBERON:0006240!1.43e-12!39;UBERON:0002346!2.10e-12!71;UBERON:0003075!2.10e-12!71;UBERON:0007284!2.10e-12!71;UBERON:0004121!4.66e-12!102;UBERON:0000924!4.66e-12!102;UBERON:0006601!4.66e-12!102;UBERON:0000956!2.55e-10!21;UBERON:0001869!2.55e-10!21;UBERON:0000203!2.55e-10!21;UBERON:0002021!4.86e-10!10;UBERON:0000411!4.86e-10!10;UBERON:0001950!4.86e-10!10;UBERON:0002619!2.28e-09!17;UBERON:0007811!5.26e-07!86;UBERON:0000153!6.16e-07!94;UBERON:0000025!9.19e-07!114 | |ontology_enrichment_uberon=UBERON:0000073!1.07e-15!75;UBERON:0001016!1.07e-15!75;UBERON:0001017!1.61e-15!73;UBERON:0005743!1.61e-15!73;UBERON:0001049!2.64e-15!52;UBERON:0005068!2.64e-15!52;UBERON:0006241!2.64e-15!52;UBERON:0007135!2.64e-15!52;UBERON:0000955!1.83e-14!50;UBERON:0006238!1.83e-14!50;UBERON:0002020!2.66e-14!34;UBERON:0002616!9.42e-14!49;UBERON:0000033!2.41e-13!63;UBERON:0003080!3.22e-13!40;UBERON:0003056!3.38e-13!49;UBERON:0002791!8.61e-13!29;UBERON:0003528!8.61e-13!29;UBERON:0001893!8.61e-13!29;UBERON:0002780!1.43e-12!39;UBERON:0001890!1.43e-12!39;UBERON:0006240!1.43e-12!39;UBERON:0002346!2.10e-12!71;UBERON:0003075!2.10e-12!71;UBERON:0007284!2.10e-12!71;UBERON:0004121!4.66e-12!102;UBERON:0000924!4.66e-12!102;UBERON:0006601!4.66e-12!102;UBERON:0000956!2.55e-10!21;UBERON:0001869!2.55e-10!21;UBERON:0000203!2.55e-10!21;UBERON:0002021!4.86e-10!10;UBERON:0000411!4.86e-10!10;UBERON:0001950!4.86e-10!10;UBERON:0002619!2.28e-09!17;UBERON:0007811!5.26e-07!86;UBERON:0000153!6.16e-07!94;UBERON:0000025!9.19e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,9.66e-42,10;UBERON:0000411,9.66e-42,10;UBERON:0001950,9.66e-42,10;UBERON:0000956,8.94e-32,21;UBERON:0001869,8.94e-32,21;UBERON:0000203,8.94e-32,21;UBERON:0003528,1.04e-29,29;UBERON:0002791,1.04e-29,29;UBERON:0001893,1.04e-29,29;UBERON:0002619,9.06e-29,17;UBERON:0002020,5.78e-25,34;UBERON:0002780,1.97e-21,39;UBERON:0001890,1.97e-21,39;UBERON:0006240,1.97e-21,39;UBERON:0003080,7.84e-21,40;UBERON:0000955,6.50e-20,47;UBERON:0006238,6.50e-20,47;UBERON:0002616,8.96e-18,46;UBERON:0003056,1.59e-16,49;UBERON:0001049,2.03e-15,52;UBERON:0005068,2.03e-15,52;UBERON:0006241,2.03e-15,52;UBERON:0007135,2.03e-15,52;UBERON:0000073,9.47e-15,54;UBERON:0001017,1.63e-13,73;UBERON:0001016,4.48e-13,75;UBERON:0002346,4.98e-12,64;UBERON:0003075,4.98e-12,64;UBERON:0007284,4.98e-12,64;UBERON:0010371,3.24e-10,73;UBERON:0004121,1.08e-09,95;UBERON:0000924,1.08e-09,95;UBERON:0006601,1.08e-09,95;UBERON:0010314,1.51e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.614426133024974,0.131886287730194,0.274462930807229,0.52091337055676,0,1.12552522006336,1.06958773443767,0.589257170947335,0.854230084794618,0.745597783301202,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.898743836428936,0.457500602818626,0.879580464790051,1.56441888173049,1.53429274398198,0.20778804455956,0.648965052271031,0.203678727700633,0,0.505445516867349,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.384341160854549,0.468508622798644,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.473489471170421,0.393528463494808,0.617068451549513,0.465067889500816,0.268273401399619,0.583826711835847,0.493679549740441,0.985004784474571,0.0810688095458557,0.146199987425332,0.219550115291051,0,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.646270193198397,0.477937595905104,1.33679204449436,0.566153061577665,0.404810701674894,0.876767573733936,0,1.60660658210904,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,1.6942555278512,2.30162618253588,4.01026859407578,3.43706364687375,3.42541259885321,6.0431511791176,4.05013500139084,3.60256962579376,2.26571204492102,4.65984280576638,0,0,0.512200817262403,0.486213434136588,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0,0.25347929989024,1.13175804831646,0.37456602987953,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0.476872379894642,0.436039249896986,0.188218760830661,0.592302255241736,1.09756783723664,0.263069711437843,0.814824683075171,1.68342681497322,0.355905054372522,0.492522411877817,0,0.619747364743864,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,1.03689612308478,0.405017814995072,0,0,0.441737081903227,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.255374676170375,0.614426133024974,0.131886287730194,0.274462930807229,0.52091337055676,0,1.12552522006336,1.06958773443767,0.589257170947335,0.854230084794618,0.745597783301202,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.898743836428936,0.457500602818626,0.879580464790051,1.56441888173049,1.53429274398198,0.20778804455956,0.648965052271031,0.203678727700633,0,0.505445516867349,0,0.130120442962704,0,0,0.30140963567143,0.272145996605311,0.384341160854549,0.468508622798644,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.61734640922383,0.398068533636986,0,0,0,0.207125772535502,0,0.36012412292203,0.473489471170421,0.393528463494808,0.617068451549513,0.465067889500816,0.268273401399619,0.583826711835847,0.493679549740441,0.985004784474571,0.0810688095458557,0.146199987425332,0.219550115291051,0,1.47202963994889,0.720332286654991,0,0,0.213288250535234,0,0,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0,0,0.646270193198397,0.477937595905104,1.33679204449436,0.566153061577665,0.404810701674894,0.876767573733936,0,1.60660658210904,0.141940085208269,0,0.325773918707152,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.324016022465404,0,0.218362563746178,0.134864346384821,0.165306911450672,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0,0,0,0,0,0.183151624267265,0,0,1.6942555278512,2.30162618253588,4.01026859407578,3.43706364687375,3.42541259885321,6.0431511791176,4.05013500139084,3.60256962579376,2.26571204492102,4.65984280576638,0,0,0.512200817262403,0.486213434136588,0,0,0.222246727801615,0.824140228955577,0.64183841918363,0,0.25347929989024,1.13175804831646,0.37456602987953,0.448176066834085,0.574354689556133,0.952587382566147,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0.476872379894642,0.436039249896986,0.188218760830661,0.592302255241736,1.09756783723664,0.263069711437843,0.814824683075171,1.68342681497322,0.355905054372522,0.492522411877817,0,0.619747364743864,0.385813221962283,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr10:109774157..109774160,- | |short_description=p@chr10:109774157..109774160,- | ||
}} | }} |
Revision as of 00:16, 15 November 2012
Short description: | p@chr10:109774157..109774160, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:109774157..109774160, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 9.66e-42 | 10 |
visual cortex | 9.66e-42 | 10 |
neocortex | 9.66e-42 | 10 |
cerebral cortex | 8.94e-32 | 21 |
cerebral hemisphere | 8.94e-32 | 21 |
pallium | 8.94e-32 | 21 |
brain grey matter | 1.04e-29 | 29 |
regional part of telencephalon | 1.04e-29 | 29 |
telencephalon | 1.04e-29 | 29 |
regional part of cerebral cortex | 9.06e-29 | 17 |
gray matter | 5.78e-25 | 34 |
regional part of forebrain | 1.97e-21 | 39 |
forebrain | 1.97e-21 | 39 |
future forebrain | 1.97e-21 | 39 |
anterior neural tube | 7.84e-21 | 40 |
brain | 6.50e-20 | 47 |
future brain | 6.50e-20 | 47 |
regional part of brain | 8.96e-18 | 46 |
pre-chordal neural plate | 1.59e-16 | 49 |
neural tube | 2.03e-15 | 52 |
neural rod | 2.03e-15 | 52 |
future spinal cord | 2.03e-15 | 52 |
neural keel | 2.03e-15 | 52 |
regional part of nervous system | 9.47e-15 | 54 |
central nervous system | 1.63e-13 | 73 |
nervous system | 4.48e-13 | 75 |
neurectoderm | 4.98e-12 | 64 |
neural plate | 4.98e-12 | 64 |
presumptive neural plate | 4.98e-12 | 64 |
ecto-epithelium | 3.24e-10 | 73 |
ectoderm-derived structure | 1.08e-09 | 95 |
ectoderm | 1.08e-09 | 95 |
presumptive ectoderm | 1.08e-09 | 95 |
structure with developmental contribution from neural crest | 1.51e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.