FFCP PHASE1:Mm9::chr1:135811214..135811246,+: Difference between revisions
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|id=chr1:135811214..135811246,+ | |id=chr1:135811214..135811246,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.71e-15,3;CL:0000359,3.71e-15,3;CL:0002539,3.71e-15,3;CL:0000514,3.71e-15,3;CL:0000680,5.11e-13,6;CL:0000187,5.11e-13,6;CL:0000056,5.11e-13,6;CL:0002605,3.40e-11,2;CL:0002604,3.40e-11,2;CL:0000222,3.49e-11,7;CL:0002453,7.50e-10,8;CL:0000355,9.90e-09,9;CL:0000333,6.62e-08,10;CL:0000095,6.62e-08,10;CL:0000243,6.62e-08,10;CL:0000123,6.62e-08,10;CL:0000125,6.62e-08,10;CL:0000030,6.62e-08,10;CL:0000339,6.62e-08,10;CL:0000128,8.39e-08,6;CL:0000126,8.39e-08,6;CL:0000127,8.39e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,3.71e-15,3;UBERON:0004237,3.71e-15,3;UBERON:0004695,3.71e-15,3;UBERON:0002111,3.71e-15,3;UBERON:0004178,3.71e-15,3;UBERON:0000947,1.67e-11,4;UBERON:0001637,1.67e-11,4;UBERON:0004573,1.67e-11,4;UBERON:0003509,1.67e-11,4;UBERON:0004571,1.67e-11,4;UBERON:0010191,1.67e-11,4;UBERON:0004572,1.67e-11,4;UBERON:0000055,2.67e-09,5;UBERON:0007500,2.67e-09,5;UBERON:0001981,2.67e-09,5;UBERON:0002049,2.67e-09,5;UBERON:0007798,2.67e-09,5;UBERON:0004537,2.67e-09,5;UBERON:0006965,2.67e-09,5;UBERON:0001134,9.90e-09,9;UBERON:0002036,9.90e-09,9;UBERON:0002385,9.90e-09,9;UBERON:0000486,9.90e-09,9;UBERON:0007503,9.90e-09,9;UBERON:0001015,9.90e-09,9;UBERON:0002329,9.90e-09,9;UBERON:0003082,9.90e-09,9;UBERON:0003059,9.90e-09,9;UBERON:0007282,9.90e-09,9;UBERON:0004290,9.90e-09,9;UBERON:0009618,9.90e-09,9;UBERON:0000383,7.20e-08,10;UBERON:0007524,3.66e-07,11;UBERON:0003077,3.66e-07,11;UBERON:0007285,3.66e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.93993100536592,1.83546752161682,0,1.09012578190223,7.0299578475031,12.8323733389027,0.139986421625363,0,0,0,0,0.771778308107841,1.71920063963254,0,0,0,0,0,0,0.449949858640699,0,2.1314403448383,0.599200221036809,1.92109152660777,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,1.36344258062446,4.1565760736459,5.65343319216544,0,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,0.494389935468748,0.289198713839823,0,0.485300549842228,0.662524555381181,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0.841767423545896,0,0,0,0.150704817835715,0,0.12811372028485,0.374806898238915,0,0,0,0,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0.438599962275997,0,0.402619256281115,0.210289948564127,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0.936113019343682,0.757736633841335,0.179397413521912,0,1.10851914099963,0,0.488894929326078,0.169745085775188,0,0,0,0,0,0.221464689648775,0.318909537314974,1.3109065177259,1.72684981865896,2.02508682014116,0,0,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0.493647061806363,1.2178597964584,0.23467170806371,0.63549621259146,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0.341741761595705,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0.404593039154462,0.330613822901344,0,0.259229946583586,1.24267862617385,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0,0,0,0.772758376128762,0.750729901804728,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.57386499620653,0,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,2.93993100536592,1.83546752161682,0,1.09012578190223,7.0299578475031,12.8323733389027,0.139986421625363,0,0,0,0,0.771778308107841,1.71920063963254,0,0,0,0,0,0,0.449949858640699,0,2.1314403448383,0.599200221036809,1.92109152660777,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,1.36344258062446,4.1565760736459,5.65343319216544,0,1.28326477414318,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.376999773989026,0.494389935468748,0.289198713839823,0,0.485300549842228,0.662524555381181,0.484875253135222,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0.841767423545896,0,0,0,0.150704817835715,0,0.12811372028485,0.374806898238915,0,0,0,0,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.492502392237286,0.243206428637567,0.438599962275997,0,0.402619256281115,0.210289948564127,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0.198956472041151,0,0,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0.549122826376163,0,0,0.936113019343682,0.757736633841335,0.179397413521912,0,1.10851914099963,0,0.488894929326078,0.169745085775188,0,0,0,0,0,0.221464689648775,0.318909537314974,1.3109065177259,1.72684981865896,2.02508682014116,0,0,0.491764273019036,0,0.160550589987792,0,0,0.252470927204373,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0.493647061806363,1.2178597964584,0.23467170806371,0.63549621259146,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0.370850604021019,0.341741761595705,0,0,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0.404593039154462,0.330613822901344,0,0.259229946583586,1.24267862617385,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0.209718688851422,0.241584120826006,0.288030006257865,0,0,0.205421914329655,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0.906921534460845,0,0,0,0.772758376128762,0.750729901804728,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0.192909220463705,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0.57386499620653,0,0.695603506861264 | ||
|short_description=p@chr1:135811214..135811246,+ | |short_description=p@chr1:135811214..135811246,+ | ||
}} | }} |
Revision as of 18:57, 14 November 2012
Short description: | p@chr1:135811214..135811246, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811214..135811246, + |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.71e-15 | 3 |
vascular associated smooth muscle cell | 3.71e-15 | 3 |
aortic smooth muscle cell | 3.71e-15 | 3 |
smooth muscle myoblast | 3.71e-15 | 3 |
muscle precursor cell | 5.11e-13 | 6 |
muscle cell | 5.11e-13 | 6 |
myoblast | 5.11e-13 | 6 |
astrocyte of the cerebral cortex | 3.40e-11 | 2 |
astrocyte of the hippocampus | 3.40e-11 | 2 |
mesodermal cell | 3.49e-11 | 7 |
oligodendrocyte precursor cell | 7.50e-10 | 8 |
multi-potent skeletal muscle stem cell | 9.90e-09 | 9 |
migratory neural crest cell | 6.62e-08 | 10 |
neuron associated cell | 6.62e-08 | 10 |
glial cell (sensu Vertebrata) | 6.62e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 6.62e-08 | 10 |
glial cell | 6.62e-08 | 10 |
glioblast | 6.62e-08 | 10 |
glioblast (sensu Vertebrata) | 6.62e-08 | 10 |
oligodendrocyte | 8.39e-08 | 6 |
macroglial cell | 8.39e-08 | 6 |
astrocyte | 8.39e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 3.71e-15 | 3 |
blood vessel smooth muscle | 3.71e-15 | 3 |
arterial system smooth muscle | 3.71e-15 | 3 |
artery smooth muscle tissue | 3.71e-15 | 3 |
aorta smooth muscle tissue | 3.71e-15 | 3 |
aorta | 1.67e-11 | 4 |
artery | 1.67e-11 | 4 |
systemic artery | 1.67e-11 | 4 |
arterial blood vessel | 1.67e-11 | 4 |
systemic arterial system | 1.67e-11 | 4 |
aortic system | 1.67e-11 | 4 |
arterial system | 1.67e-11 | 4 |
vessel | 2.67e-09 | 5 |
epithelial tube open at both ends | 2.67e-09 | 5 |
blood vessel | 2.67e-09 | 5 |
vasculature | 2.67e-09 | 5 |
vascular system | 2.67e-09 | 5 |
blood vasculature | 2.67e-09 | 5 |
vascular cord | 2.67e-09 | 5 |
skeletal muscle tissue | 9.90e-09 | 9 |
striated muscle tissue | 9.90e-09 | 9 |
muscle tissue | 9.90e-09 | 9 |
multilaminar epithelium | 9.90e-09 | 9 |
epithelial vesicle | 9.90e-09 | 9 |
musculature | 9.90e-09 | 9 |
somite | 9.90e-09 | 9 |
myotome | 9.90e-09 | 9 |
presomitic mesoderm | 9.90e-09 | 9 |
presumptive segmental plate | 9.90e-09 | 9 |
dermomyotome | 9.90e-09 | 9 |
trunk paraxial mesoderm | 9.90e-09 | 9 |
musculature of body | 7.20e-08 | 10 |
dense mesenchyme tissue | 3.66e-07 | 11 |
paraxial mesoderm | 3.66e-07 | 11 |
presumptive paraxial mesoderm | 3.66e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.