FFCP PHASE1:Mm9::chr2:169512387..169512392,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:169512387..169512392,- | |id=chr2:169512387..169512392,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.09e-38!3;UBERON:0000478!2.09e-38!3;UBERON:0000158!2.09e-38!3;UBERON:0005795!3.12e-29!4;UBERON:0000995!3.12e-29!4;UBERON:0001987!2.38e-26!2;UBERON:0003124!2.38e-26!2;UBERON:0004340!2.38e-26!2;UBERON:0003975!1.45e-23!5;UBERON:0004175!6.67e-23!9;UBERON:0004871!1.59e-17!3;UBERON:0003134!4.93e-15!8;UBERON:0006834!4.85e-14!1;UBERON:0000305!8.69e-14!1;UBERON:0000474!1.90e-13!9;UBERON:0003100!3.92e-11!11;UBERON:0003133!6.53e-09!24;UBERON:0005156!2.94e-08!26;UBERON:0000990!2.94e-08!26;UBERON:0001343!1.76e-07!2;UBERON:0004910!1.76e-07!2;UBERON:0004909!1.76e-07!2;UBERON:0005154!1.76e-07!2;UBERON:0005295!1.76e-07!2;UBERON:0005297!1.76e-07!2;UBERON:0005294!1.76e-07!2;UBERON:0010141!1.76e-07!2;UBERON:0005891!1.76e-07!2 | |ontology_enrichment_uberon=UBERON:0005631!2.09e-38!3;UBERON:0000478!2.09e-38!3;UBERON:0000158!2.09e-38!3;UBERON:0005795!3.12e-29!4;UBERON:0000995!3.12e-29!4;UBERON:0001987!2.38e-26!2;UBERON:0003124!2.38e-26!2;UBERON:0004340!2.38e-26!2;UBERON:0003975!1.45e-23!5;UBERON:0004175!6.67e-23!9;UBERON:0004871!1.59e-17!3;UBERON:0003134!4.93e-15!8;UBERON:0006834!4.85e-14!1;UBERON:0000305!8.69e-14!1;UBERON:0000474!1.90e-13!9;UBERON:0003100!3.92e-11!11;UBERON:0003133!6.53e-09!24;UBERON:0005156!2.94e-08!26;UBERON:0000990!2.94e-08!26;UBERON:0001343!1.76e-07!2;UBERON:0004910!1.76e-07!2;UBERON:0004909!1.76e-07!2;UBERON:0005154!1.76e-07!2;UBERON:0005295!1.76e-07!2;UBERON:0005297!1.76e-07!2;UBERON:0005294!1.76e-07!2;UBERON:0010141!1.76e-07!2;UBERON:0005891!1.76e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005795,2.83e-65,4;UBERON:0000995,2.83e-65,4;UBERON:0001987,3.28e-58,2;UBERON:0003124,3.28e-58,2;UBERON:0004340,3.28e-58,2;UBERON:0003975,1.64e-52,5;UBERON:0005631,2.66e-39,3;UBERON:0000478,2.66e-39,3;UBERON:0000158,2.66e-39,3;UBERON:0003134,2.45e-33,8;UBERON:0006834,5.62e-30,1;UBERON:0004175,8.84e-30,9;UBERON:0000474,8.84e-30,9;UBERON:0003100,1.34e-24,11;UBERON:0003133,6.63e-12,24;UBERON:0005156,4.51e-11,26;UBERON:0000990,4.51e-11,26;UBERON:0006554,1.52e-07,18;UBERON:0001008,3.34e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3043932289694,1.69465656691056,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81523713176773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3043932289694,1.69465656691056,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81523713176773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:169512387..169512392,- | |short_description=p@chr2:169512387..169512392,- | ||
}} | }} |
Revision as of 18:45, 14 November 2012
Short description: | p@chr2:169512387..169512392, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:169512387..169512392, - |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic uterus | 2.83e-65 | 4 |
uterus | 2.83e-65 | 4 |
placenta | 3.28e-58 | 2 |
chorion | 3.28e-58 | 2 |
allantois | 3.28e-58 | 2 |
internal female genitalia | 1.64e-52 | 5 |
extraembryonic membrane | 2.66e-39 | 3 |
extraembryonic structure | 2.66e-39 | 3 |
membranous layer | 2.66e-39 | 3 |
female reproductive organ | 2.45e-33 | 8 |
uterus or analog | 5.62e-30 | 1 |
internal genitalia | 8.84e-30 | 9 |
female reproductive system | 8.84e-30 | 9 |
female organism | 1.34e-24 | 11 |
reproductive organ | 6.63e-12 | 24 |
reproductive structure | 4.51e-11 | 26 |
reproductive system | 4.51e-11 | 26 |
urinary system structure | 1.52e-07 | 18 |
renal system | 3.34e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.