FFCP PHASE1:Mm9::chr1:174242509..174242568,+: Difference between revisions
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|id=chr1:174242509..174242568,+ | |id=chr1:174242509..174242568,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.30e-17!50;CL:0000221!2.94e-16!44;CL:0000133!2.94e-16!44;CL:0002319!6.25e-16!43;CL:0000393!1.07e-13!39;CL:0000211!1.07e-13!39;CL:0002321!9.95e-12!70;CL:0000220!9.95e-12!70;CL:0000540!1.40e-11!33;CL:0000047!1.40e-11!33;CL:0000031!1.40e-11!33;CL:0000404!1.40e-11!33;CL:0000117!2.94e-10!23;CL:0000337!2.94e-10!23 | |ontology_enrichment_celltype=CL:0000055!3.30e-17!50;CL:0000221!2.94e-16!44;CL:0000133!2.94e-16!44;CL:0002319!6.25e-16!43;CL:0000393!1.07e-13!39;CL:0000211!1.07e-13!39;CL:0002321!9.95e-12!70;CL:0000220!9.95e-12!70;CL:0000540!1.40e-11!33;CL:0000047!1.40e-11!33;CL:0000031!1.40e-11!33;CL:0000404!1.40e-11!33;CL:0000117!2.94e-10!23;CL:0000337!2.94e-10!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.94e-16,44;CL:0000133,2.94e-16,44;CL:0002319,6.25e-16,43;CL:0000393,1.07e-13,39;CL:0000211,1.07e-13,39;CL:0002321,9.95e-12,70;CL:0000540,1.40e-11,33;CL:0000047,1.40e-11,33;CL:0000031,1.40e-11,33;CL:0000404,1.40e-11,33;CL:0000117,2.94e-10,23;CL:0000337,2.94e-10,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.87e-28!75;UBERON:0001016!3.87e-28!75;UBERON:0001017!8.15e-28!73;UBERON:0005743!8.15e-28!73;UBERON:0004121!1.07e-23!102;UBERON:0000924!1.07e-23!102;UBERON:0006601!1.07e-23!102;UBERON:0001049!2.77e-20!52;UBERON:0005068!2.77e-20!52;UBERON:0006241!2.77e-20!52;UBERON:0007135!2.77e-20!52;UBERON:0000955!5.03e-20!50;UBERON:0006238!5.03e-20!50;UBERON:0002616!1.28e-19!49;UBERON:0000033!2.73e-18!63;UBERON:0002346!1.00e-17!71;UBERON:0003075!1.00e-17!71;UBERON:0007284!1.00e-17!71;UBERON:0002020!2.44e-17!34;UBERON:0002791!2.39e-15!29;UBERON:0003528!2.39e-15!29;UBERON:0001893!2.39e-15!29;UBERON:0003080!1.65e-14!40;UBERON:0003056!4.64e-14!49;UBERON:0002780!6.83e-14!39;UBERON:0001890!6.83e-14!39;UBERON:0006240!6.83e-14!39;UBERON:0000956!4.91e-12!21;UBERON:0001869!4.91e-12!21;UBERON:0000203!4.91e-12!21;UBERON:0002619!3.85e-10!17;UBERON:0007811!1.45e-09!86;UBERON:0000153!6.85e-09!94;UBERON:0002021!2.08e-07!10;UBERON:0000411!2.08e-07!10;UBERON:0001950!2.08e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!3.87e-28!75;UBERON:0001016!3.87e-28!75;UBERON:0001017!8.15e-28!73;UBERON:0005743!8.15e-28!73;UBERON:0004121!1.07e-23!102;UBERON:0000924!1.07e-23!102;UBERON:0006601!1.07e-23!102;UBERON:0001049!2.77e-20!52;UBERON:0005068!2.77e-20!52;UBERON:0006241!2.77e-20!52;UBERON:0007135!2.77e-20!52;UBERON:0000955!5.03e-20!50;UBERON:0006238!5.03e-20!50;UBERON:0002616!1.28e-19!49;UBERON:0000033!2.73e-18!63;UBERON:0002346!1.00e-17!71;UBERON:0003075!1.00e-17!71;UBERON:0007284!1.00e-17!71;UBERON:0002020!2.44e-17!34;UBERON:0002791!2.39e-15!29;UBERON:0003528!2.39e-15!29;UBERON:0001893!2.39e-15!29;UBERON:0003080!1.65e-14!40;UBERON:0003056!4.64e-14!49;UBERON:0002780!6.83e-14!39;UBERON:0001890!6.83e-14!39;UBERON:0006240!6.83e-14!39;UBERON:0000956!4.91e-12!21;UBERON:0001869!4.91e-12!21;UBERON:0000203!4.91e-12!21;UBERON:0002619!3.85e-10!17;UBERON:0007811!1.45e-09!86;UBERON:0000153!6.85e-09!94;UBERON:0002021!2.08e-07!10;UBERON:0000411!2.08e-07!10;UBERON:0001950!2.08e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.87e-28,75;UBERON:0001017,8.15e-28,73;UBERON:0004121,5.29e-26,95;UBERON:0000924,5.29e-26,95;UBERON:0006601,5.29e-26,95;UBERON:0000073,8.14e-22,54;UBERON:0010371,3.77e-21,73;UBERON:0002346,2.37e-20,64;UBERON:0003075,2.37e-20,64;UBERON:0007284,2.37e-20,64;UBERON:0001049,2.77e-20,52;UBERON:0005068,2.77e-20,52;UBERON:0006241,2.77e-20,52;UBERON:0007135,2.77e-20,52;UBERON:0000955,4.85e-18,47;UBERON:0006238,4.85e-18,47;UBERON:0002616,1.21e-17,46;UBERON:0002020,2.44e-17,34;UBERON:0003528,2.39e-15,29;UBERON:0002791,2.39e-15,29;UBERON:0001893,2.39e-15,29;UBERON:0003080,1.65e-14,40;UBERON:0003056,4.64e-14,49;UBERON:0002780,6.83e-14,39;UBERON:0001890,6.83e-14,39;UBERON:0006240,6.83e-14,39;UBERON:0000956,4.91e-12,21;UBERON:0001869,4.91e-12,21;UBERON:0000203,4.91e-12,21;UBERON:0002619,3.85e-10,17;UBERON:0010314,1.11e-09,92;UBERON:0002021,2.08e-07,10;UBERON:0000411,2.08e-07,10;UBERON:0001950,2.08e-07,10 | |||
|phase1_expression=24.1824759128239,3.14077866875425,3.18499467572675,1.20985684522732,2.50447864973174,11.2479112180966,14.0167584357315,8.39301602370246,2.67498572088167,1.40438715793196,2.91070545983358,4.78632953972018,4.45121897821135,6.6439505838438,9.99329285446988,8.70643649776252,7.69518065940961,6.30924330716475,7.67840828192137,6.79023442876848,25.7681169157741,18.2695350209629,17.5003858723087,15.1992801653736,19.2703796096423,2.29692785646008,5.59990595006797,7.75696437669201,15.3918969759663,10.3332353201572,12.6386391073524,60.327913978665,39.9792111929971,47.5445043046316,21.3750198615943,19.7819227976606,22.8669679013853,12.1374172913703,10.9386948233332,9.42342739152837,8.82347232046521,15.0270006690858,8.73918635456076,45.7005449251346,47.4444038107328,38.9119114582765,52.4202200713186,77.616955671439,87.6547869110543,64.9395862908107,47.3154105093725,63.2511283205875,3.02008690903925,5.80289713609076,6.72187598284928,28.2985379639542,48.9972182295274,36.6127185516984,26.0988234508881,29.0945038599618,22.1840991227163,48.4547680858859,46.2433293977792,279.418862215874,315.448369658865,319.716051725745,139.913251612095,145.234519411548,60.347354363534,67.232957289182,63.7284632894687,63.4145185376444,74.2118297597421,43.1167613236638,37.8589610522034,44.122501757281,155.263392209138,107.768113343898,113.66883460962,31.1251639043257,23.0548861878072,29.1711487511786,121.165421566599,149.132091658395,129.267317619181,53.9170311416812,40.148813985347,28.8919141029216,16.4325839533009,57.6611003614774,13.0439019915755,9.46466264679525,35.358509352803,6.47643829965381,8.4470934268197,10.3046184032387,16.1511083151515,28.4618638705356,42.0853327456647,30.7405429823996,34.5066378452867,21.815501160434,17.8363667794652,21.3320010945999,18.8347205679756,25.0826266820348,18.704404465547,13.8162494460063,10.616453229534,14.398887489288,15.6136794089522,12.7875500891099,13.1450833435953,18.6896074285252,11.6412820064348,14.325991411583,7.66304399976559,10.4111536982336,17.6922110389975,17.3090529443728,13.0296495891632,13.091631834651,7.45567044872489,81.1002807721986,76.0291545732842,12.2619386500124,12.7004031976275,16.7972764678154,16.6461997465715,114.589839144689,85.0951121242645,31.9162054366676,82.7403764115236,92.5689955535797,97.4525928984337,107.07923362472,15.785101396799,16.6705340617525,20.217820674694,30.3036272476523,11.7108398666433,18.1622662502444,14.4049703844279,22.756427493193,15.5123218065028,22.163673609279,22.7695190680141,38.8055056108524,13.5807835547691,12.4810012910761,18.4748680372146,18.1932457914887,18.0730711996639,18.1091126591527,17.4914815946752,10.5488161413801,22.4708219940235,22.1319200118655,19.3231179589003,10.9776659443816,9.61556845922494,12.244220179349,8.99629995223799,12.9864392953287,10.0273623376796,7.44108623201305,10.1943892531855,5.95503246072564,8.22799249567402,5.41752631461014,6.89084881139774,8.47959927066927,9.22110484222413,10.7365135008297,87.2703286541128,45.1751248345059,3.63460661282178,8.72686869989696,14.5036010363959,10.9151235774406,17.6548422011268,12.7060620512706,14.6769508937614,14.2669219584419,12.3377556001573,9.22314146454461,15.3314477368164,12.5342577385925,13.4525220112193,15.2799299471218,12.5360068927323,13.9398891278057,11.1904061562318,12.5673363870702,7.88954149711563,15.4775009162439,17.2617713579187,8.41629838683823,10.4972651626267,10.4803205065518,9.10592621479974,8.51440431060424,18.3800628794032,8.17541018008861,12.1866576970186,9.89393294493356,11.3601667977562,17.6059326619264,28.0088436959562,17.8371605219503,7.94462611197673,13.7280706594041,74.7594673942244,19.3513292787622,17.78614736753,14.9021537988796,6.63770430031075,9.64887042726734,18.4753190166605,12.506433176852,13.2001630918041,16.6350184059684,18.3058393665032,11.7254380209271,11.4260947625287,10.1469496886055,13.8718926813448,14.1737401375216,13.0752910299139,18.3526912481627,15.0235934223329,17.6471851469444,99.5222473999197,114.220193601929,59.0117127622843,23.1786866895975,74.816574934311,98.5750284240429,53.9345970289262,9.3414243065618,22.4010835785542,21.4741309363151,30.1592756825919,27.0034741686384,30.0778210011232,27.4584234865167,20.2405350837447,20.4579100537918,24.1125544547379,44.0210203497876,23.2781739741561,25.2853157207502,13.5196176263468,24.4155781999352,7.96470830039777,32.0470439724576,25.6975023420038,22.0667943314401,21.2617362874156,24.2873766875703,17.3146956422708,11.6330793432802,14.6163925137736,12.6414703174326,23.1920938864997,20.6271086496374,17.3624198934432,11.7039711120352,16.4285528404098,15.6466035573062,12.7684968222437,18.7287258482174,16.4549020602121,28.0107753185431,35.2007562095566,56.9828270623676,8.60060752414351,23.4138479176902,11.1410454420175,15.2591700068234,26.1425433366869,21.9948805658382,13.1166376483433,59.5215219453736,17.428829841381,23.9408766837338,17.2230910453832,10.360265135258,9.29520748502971,16.7008066440762,8.49892149969276,13.8551937800421,9.12119827109197,13.3653886522116,10.122751794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| ||
|short_description=p1@Igsf8 | |short_description=p1@Igsf8 | ||
}} | }} |
Revision as of 18:44, 14 November 2012
Short description: | p1@Igsf8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Igsf8_5end |
Coexpression cluster: | MCL_coexpression_mm9:247 |
Association with transcript: | 0bp_to_NM_080419, uc007dqe.1_5end |
EntrezGene: | Igsf8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.94e-16 | 44 |
neurectodermal cell | 2.94e-16 | 44 |
neural cell | 6.25e-16 | 43 |
electrically responsive cell | 1.07e-13 | 39 |
electrically active cell | 1.07e-13 | 39 |
embryonic cell | 9.95e-12 | 70 |
neuron | 1.40e-11 | 33 |
neuronal stem cell | 1.40e-11 | 33 |
neuroblast | 1.40e-11 | 33 |
electrically signaling cell | 1.40e-11 | 33 |
CNS neuron (sensu Vertebrata) | 2.94e-10 | 23 |
neuroblast (sensu Vertebrata) | 2.94e-10 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 3.87e-28 | 75 |
central nervous system | 8.15e-28 | 73 |
ectoderm-derived structure | 5.29e-26 | 95 |
ectoderm | 5.29e-26 | 95 |
presumptive ectoderm | 5.29e-26 | 95 |
regional part of nervous system | 8.14e-22 | 54 |
ecto-epithelium | 3.77e-21 | 73 |
neurectoderm | 2.37e-20 | 64 |
neural plate | 2.37e-20 | 64 |
presumptive neural plate | 2.37e-20 | 64 |
neural tube | 2.77e-20 | 52 |
neural rod | 2.77e-20 | 52 |
future spinal cord | 2.77e-20 | 52 |
neural keel | 2.77e-20 | 52 |
brain | 4.85e-18 | 47 |
future brain | 4.85e-18 | 47 |
regional part of brain | 1.21e-17 | 46 |
gray matter | 2.44e-17 | 34 |
brain grey matter | 2.39e-15 | 29 |
regional part of telencephalon | 2.39e-15 | 29 |
telencephalon | 2.39e-15 | 29 |
anterior neural tube | 1.65e-14 | 40 |
pre-chordal neural plate | 4.64e-14 | 49 |
regional part of forebrain | 6.83e-14 | 39 |
forebrain | 6.83e-14 | 39 |
future forebrain | 6.83e-14 | 39 |
cerebral cortex | 4.91e-12 | 21 |
cerebral hemisphere | 4.91e-12 | 21 |
pallium | 4.91e-12 | 21 |
regional part of cerebral cortex | 3.85e-10 | 17 |
structure with developmental contribution from neural crest | 1.11e-09 | 92 |
occipital lobe | 2.08e-07 | 10 |
visual cortex | 2.08e-07 | 10 |
neocortex | 2.08e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.