FFCP PHASE1:Mm9::chr11:94871212..94871233,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr11:94871212..94871233,+ | |id=chr11:94871212..94871233,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.38e-12!23;CL:0000337!2.38e-12!23;CL:0000540!1.79e-11!33;CL:0000047!1.79e-11!33;CL:0000031!1.79e-11!33;CL:0000404!1.79e-11!33;CL:0002319!1.20e-09!43;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0000393!4.25e-08!39;CL:0000211!4.25e-08!39 | |ontology_enrichment_celltype=CL:0000117!2.38e-12!23;CL:0000337!2.38e-12!23;CL:0000540!1.79e-11!33;CL:0000047!1.79e-11!33;CL:0000031!1.79e-11!33;CL:0000404!1.79e-11!33;CL:0002319!1.20e-09!43;CL:0000221!1.33e-09!44;CL:0000133!1.33e-09!44;CL:0000393!4.25e-08!39;CL:0000211!4.25e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.55e-13,23;CL:0000337,6.55e-13,23;CL:0000540,5.47e-12,33;CL:0000047,5.47e-12,33;CL:0000031,5.47e-12,33;CL:0000404,5.47e-12,33;CL:0002319,1.79e-09,43;CL:0000221,1.96e-09,44;CL:0000133,1.96e-09,44;CL:0000393,3.58e-08,39;CL:0000211,3.58e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.25e-15!73;UBERON:0005743!5.25e-15!73;UBERON:0000073!3.58e-14!75;UBERON:0001016!3.58e-14!75;UBERON:0002346!2.82e-13!71;UBERON:0003075!2.82e-13!71;UBERON:0007284!2.82e-13!71;UBERON:0004121!4.61e-12!102;UBERON:0000924!4.61e-12!102;UBERON:0006601!4.61e-12!102;UBERON:0001049!5.10e-12!52;UBERON:0005068!5.10e-12!52;UBERON:0006241!5.10e-12!52;UBERON:0007135!5.10e-12!52;UBERON:0000033!1.54e-11!63;UBERON:0003056!1.15e-10!49;UBERON:0000955!9.03e-10!50;UBERON:0006238!9.03e-10!50;UBERON:0002616!1.92e-09!49;UBERON:0000468!3.46e-08!333;UBERON:0003080!5.57e-08!40;UBERON:0002020!7.62e-08!34;UBERON:0000153!1.30e-07!94;UBERON:0002780!1.49e-07!39;UBERON:0001890!1.49e-07!39;UBERON:0006240!1.49e-07!39;UBERON:0000922!7.04e-07!328 | |ontology_enrichment_uberon=UBERON:0001017!5.25e-15!73;UBERON:0005743!5.25e-15!73;UBERON:0000073!3.58e-14!75;UBERON:0001016!3.58e-14!75;UBERON:0002346!2.82e-13!71;UBERON:0003075!2.82e-13!71;UBERON:0007284!2.82e-13!71;UBERON:0004121!4.61e-12!102;UBERON:0000924!4.61e-12!102;UBERON:0006601!4.61e-12!102;UBERON:0001049!5.10e-12!52;UBERON:0005068!5.10e-12!52;UBERON:0006241!5.10e-12!52;UBERON:0007135!5.10e-12!52;UBERON:0000033!1.54e-11!63;UBERON:0003056!1.15e-10!49;UBERON:0000955!9.03e-10!50;UBERON:0006238!9.03e-10!50;UBERON:0002616!1.92e-09!49;UBERON:0000468!3.46e-08!333;UBERON:0003080!5.57e-08!40;UBERON:0002020!7.62e-08!34;UBERON:0000153!1.30e-07!94;UBERON:0002780!1.49e-07!39;UBERON:0001890!1.49e-07!39;UBERON:0006240!1.49e-07!39;UBERON:0000922!7.04e-07!328 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.38e-15,64;UBERON:0003075,4.38e-15,64;UBERON:0007284,4.38e-15,64;UBERON:0001017,5.64e-15,73;UBERON:0001016,9.13e-14,75;UBERON:0004121,3.61e-12,95;UBERON:0000924,3.61e-12,95;UBERON:0006601,3.61e-12,95;UBERON:0001049,7.95e-12,52;UBERON:0005068,7.95e-12,52;UBERON:0006241,7.95e-12,52;UBERON:0007135,7.95e-12,52;UBERON:0000073,8.34e-12,54;UBERON:0010371,1.22e-11,73;UBERON:0003056,1.95e-10,49;UBERON:0000955,4.38e-09,47;UBERON:0006238,4.38e-09,47;UBERON:0002616,9.47e-09,46;UBERON:0010314,4.06e-08,92;UBERON:0003080,1.14e-07,40;UBERON:0000922,1.71e-07,320;UBERON:0002020,1.74e-07,34;UBERON:0002780,3.11e-07,39;UBERON:0001890,3.11e-07,39;UBERON:0006240,3.11e-07,39 | |||
|phase1_expression=3.20297694209588,0,0,0,0,0.839396359559449,0.934450562382103,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,12.6581709489952,12.5534665781692,27.9824751251259,0.157731082679119,0.411343300817216,0.42438965179803,1.61582251287033,0.0992909512008853,0,0,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,6.76571266343027,0,0.288851619751275,0,0,0,0,0,0,0,0,0.881277725829041,0.709638518536602,2.20256102594018,1.56478268869608,3.70642765846759,2.41654801007919,0.777719596297134,1.25987779462826,2.87505128729943,0,0,0,0,0.573066879877513,0,18.613114399083,9.52183762689659,13.3104594736298,1.0165335962074,0.889294796111139,0.449949858640699,0,0,3.29560121570245,4.61061966385865,16.279269132431,14.7156472781543,14.0917724105426,10.5690864229407,13.4729809980484,14.6988959057945,12.7474476454254,10.1114066527102,2.20231761998777,4.46905683298157,4.76180253094355,15.2988093767025,13.0827330351446,19.7947080811569,6.42120897703176,4.50210088025344,4.5839474333043,14.7314292736834,11.3897344639282,14.5391567743734,0.681535739998656,0.68014404096107,0,0,0,0,0,0,0.842666520790511,1.87473354835864,0.519572009205738,0.35333957451034,2.53518155598025,0,2.54805239706646,0,0,0,0,0.22836775943812,1.55362730188303,0.445326417194474,2.60227990149204,0.913396434936424,1.61430848079241,2.11011696773672,1.52865319276416,0.628332956648377,0.247194967734374,0.722996784599558,5.30766331169925,4.69123864847487,7.50861162765338,8.727754556434,0,7.02673912827713,4.39838084308256,0,0.11981512450592,0,0.127070227073065,9.13722900369418,0.915001205637253,12.942398267625,4.86708096538374,3.3243009452943,4.98691306942944,4.86723789203273,6.82323737797119,4.60305791257344,1.26361379216837,2.52530227063769,4.68433594665733,5.0578462975364,5.04173963454978,6.78171680260718,9.32100038373192,7.43059577652129,7.40243624021858,3.3631438196072,4.74249584452253,3.9712276835242,4.57472922826267,3.94552318369635,3.61461423993277,3.83077383174383,2.88094990971121,2.9855140022774,0,0,0,3.93538967817454,3.28336483973535,2.52086886045421,3.07768156260773,1.18058539048442,1.3884040159864,1.86027155800326,1.07309360559848,0.700592054203017,1.31647879930784,1.31333971263276,0.324275238183423,0,0.878200461164203,0.134206418760372,4.41608891984667,17.0821656549612,0.330418782983798,0.264450566663544,4.05247676016945,3.25131340604614,2.31961430379768,2.8235693447268,1.77902435075896,1.14135375667535,0,1.15289268306808,0.754005626400808,1.59165177632921,1.75467678407208,0,0.216138049874694,0.597423819763102,2.27601481143698,2.85621281524322,4.50830942692322,2.8511185898344,2.90928730751439,2.31448205638051,2.08680572510049,0.442830443938806,0.627994911365499,0.740382983530803,0,21.6898637430922,18.4765455406411,19.7878658898671,16.8373900752457,17.1235783424216,9.16653066413111,7.19240343627027,3.89124544260085,4.3929826110093,2.87536413054709,2.60498663367952,0,0,0,0,0.923765950833023,2.4633883530163,4.56301934037672,2.54617628662782,1.17345124144251,2.51259386162724,0.714130922658041,1.17080188714679,1.57635144106191,2.6575762757853,2.07291199254733,0,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,3.53211297973142,5.50894926983355,2.62295912602681,0.252470927204373,1.89304931649754,4.68526493155966,3.01592756825919,1.91175038362042,2.67358408898873,2.54768877709949,2.42886421004937,3.79932615284705,3.55759000151871,5.14114106274891,1.13552068166615,5.69809931735217,3.90928702448583,1.97964147567043,0,2.6705869977048,1.209294227859,0.565815239267694,2.95301892880773,1.53717573971964,1.55056975900933,0.727067458955011,1.06949213515416,0.316036757935816,0,0,2.38307724027652,3.42116078659489,4.39819524861365,3.42939256050548,4.78818630834139,3.56737635204141,6.08831376227848,7.00269382963578,0.938686832254841,0.21183207086382,0.220528398054962,1.31909002353184,0.968786560175433,1.14594557363496,0.954978752025092,0.820704498725306,0.291480836629851,8.34413859047294,9.56876932467975,4.33412422722767,6.85219751267933,16.7647926734175,13.8061169998235,11.8964650067392,0.169978429993855,0.279902904647316,0,0.954670618015114,5.21954389408873,5.48962561242491,2.26811215725783,2.09088296014469,3.49380101993884,2.02296519577231,1.65306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,2.39226473670366,1.32366792365678,1.55560950675238,2.45403664607689,3.04121025883401,3.0512882047896,1.95306577265925,0.943734099831398,0,0,0.316011120628178,4.05450430580328,5.23825881540619,2.5984164595559,2.14832034800978,4.17230845040656,1.80293174279953,2.95379054349154,2.1202954489111,1.295515713135,1.10908803650525,0.877120926657772,0.673482891482306,0.584384510907845,0.906921534460845,0.221985953374065,0.269141569828427,0.335769232728157,1.9318959403219,0.563047426353546,1.28206136987086,0.214368379079066,0.501572104035363,3.95326289831947,2.30162618253588,3.43737308063638,2.57779773515531,3.42541259885321,0,1.35004500046361,0.900642406448441,0.453142408984205,2.07104124700728,5.29315472679301,5.1873233542134,4.95127456686989,7.29320151204882,5.65955539095552,4.41224420280034,3.77819437262746,3.09052585858341,4.1719497246936,3.28506375292937,2.5347929989024,2.64076877940507,5.43120743325318,4.54578582074572,5.16919220600519,7.62069906052918,5.2147946675185,5.40145817298374,4.53294490883637,4.71036544430071,3.77156177623957,3.90446773550542,2.86123427936785,2.47088908274958,4.51725025993587,3.72304274723377,2.37806364734604,4.47218509444333,3.93831930152999,1.68342681497322,3.79632057997357,4.33419722452479,2.45538625901814,6.19747364743864,4.62975866354739,5.24602213669686,3.27504251823572,3.00819475667618,1.91288332068843,2.20591419119516,1.85494268496337 | |phase1_expression=3.20297694209588,0,0,0,0,0.839396359559449,0.934450562382103,0.129123323441576,0,0.234064526321993,0.171217968225505,0,0,0,12.6581709489952,12.5534665781692,27.9824751251259,0.157731082679119,0.411343300817216,0.42438965179803,1.61582251287033,0.0992909512008853,0,0,0.45881856213434,0,0,0.215471232685889,0,0,0.221730510655305,1.27006134691926,6.76571266343027,0,0.288851619751275,0,0,0,0,0,0,0,0,0.881277725829041,0.709638518536602,2.20256102594018,1.56478268869608,3.70642765846759,2.41654801007919,0.777719596297134,1.25987779462826,2.87505128729943,0,0,0,0,0.573066879877513,0,18.613114399083,9.52183762689659,13.3104594736298,1.0165335962074,0.889294796111139,0.449949858640699,0,0,3.29560121570245,4.61061966385865,16.279269132431,14.7156472781543,14.0917724105426,10.5690864229407,13.4729809980484,14.6988959057945,12.7474476454254,10.1114066527102,2.20231761998777,4.46905683298157,4.76180253094355,15.2988093767025,13.0827330351446,19.7947080811569,6.42120897703176,4.50210088025344,4.5839474333043,14.7314292736834,11.3897344639282,14.5391567743734,0.681535739998656,0.68014404096107,0,0,0,0,0,0,0.842666520790511,1.87473354835864,0.519572009205738,0.35333957451034,2.53518155598025,0,2.54805239706646,0,0,0,0,0.22836775943812,1.55362730188303,0.445326417194474,2.60227990149204,0.913396434936424,1.61430848079241,2.11011696773672,1.52865319276416,0.628332956648377,0.247194967734374,0.722996784599558,5.30766331169925,4.69123864847487,7.50861162765338,8.727754556434,0,7.02673912827713,4.39838084308256,0,0.11981512450592,0,0.127070227073065,9.13722900369418,0.915001205637253,12.942398267625,4.86708096538374,3.3243009452943,4.98691306942944,4.86723789203273,6.82323737797119,4.60305791257344,1.26361379216837,2.52530227063769,4.68433594665733,5.0578462975364,5.04173963454978,6.78171680260718,9.32100038373192,7.43059577652129,7.40243624021858,3.3631438196072,4.74249584452253,3.9712276835242,4.57472922826267,3.94552318369635,3.61461423993277,3.83077383174383,2.88094990971121,2.9855140022774,0,0,0,3.93538967817454,3.28336483973535,2.52086886045421,3.07768156260773,1.18058539048442,1.3884040159864,1.86027155800326,1.07309360559848,0.700592054203017,1.31647879930784,1.31333971263276,0.324275238183423,0,0.878200461164203,0.134206418760372,4.41608891984667,17.0821656549612,0.330418782983798,0.264450566663544,4.05247676016945,3.25131340604614,2.31961430379768,2.8235693447268,1.77902435075896,1.14135375667535,0,1.15289268306808,0.754005626400808,1.59165177632921,1.75467678407208,0,0.216138049874694,0.597423819763102,2.27601481143698,2.85621281524322,4.50830942692322,2.8511185898344,2.90928730751439,2.31448205638051,2.08680572510049,0.442830443938806,0.627994911365499,0.740382983530803,0,21.6898637430922,18.4765455406411,19.7878658898671,16.8373900752457,17.1235783424216,9.16653066413111,7.19240343627027,3.89124544260085,4.3929826110093,2.87536413054709,2.60498663367952,0,0,0,0,0.923765950833023,2.4633883530163,4.56301934037672,2.54617628662782,1.17345124144251,2.51259386162724,0.714130922658041,1.17080188714679,1.57635144106191,2.6575762757853,2.07291199254733,0,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0,3.53211297973142,5.50894926983355,2.62295912602681,0.252470927204373,1.89304931649754,4.68526493155966,3.01592756825919,1.91175038362042,2.67358408898873,2.54768877709949,2.42886421004937,3.79932615284705,3.55759000151871,5.14114106274891,1.13552068166615,5.69809931735217,3.90928702448583,1.97964147567043,0,2.6705869977048,1.209294227859,0.565815239267694,2.95301892880773,1.53717573971964,1.55056975900933,0.727067458955011,1.06949213515416,0.316036757935816,0,0,2.38307724027652,3.42116078659489,4.39819524861365,3.42939256050548,4.78818630834139,3.56737635204141,6.08831376227848,7.00269382963578,0.938686832254841,0.21183207086382,0.220528398054962,1.31909002353184,0.968786560175433,1.14594557363496,0.954978752025092,0.820704498725306,0.291480836629851,8.34413859047294,9.56876932467975,4.33412422722767,6.85219751267933,16.7647926734175,13.8061169998235,11.8964650067392,0.169978429993855,0.279902904647316,0,0.954670618015114,5.21954389408873,5.48962561242491,2.26811215725783,2.09088296014469,3.49380101993884,2.02296519577231,1.65306911450672,0.26175594198403,0.129614973291793,0,0.56369293868419,2.39226473670366,1.32366792365678,1.55560950675238,2.45403664607689,3.04121025883401,3.0512882047896,1.95306577265925,0.943734099831398,0,0,0.316011120628178,4.05450430580328,5.23825881540619,2.5984164595559,2.14832034800978,4.17230845040656,1.80293174279953,2.95379054349154,2.1202954489111,1.295515713135,1.10908803650525,0.877120926657772,0.673482891482306,0.584384510907845,0.906921534460845,0.221985953374065,0.269141569828427,0.335769232728157,1.9318959403219,0.563047426353546,1.28206136987086,0.214368379079066,0.501572104035363,3.95326289831947,2.30162618253588,3.43737308063638,2.57779773515531,3.42541259885321,0,1.35004500046361,0.900642406448441,0.453142408984205,2.07104124700728,5.29315472679301,5.1873233542134,4.95127456686989,7.29320151204882,5.65955539095552,4.41224420280034,3.77819437262746,3.09052585858341,4.1719497246936,3.28506375292937,2.5347929989024,2.64076877940507,5.43120743325318,4.54578582074572,5.16919220600519,7.62069906052918,5.2147946675185,5.40145817298374,4.53294490883637,4.71036544430071,3.77156177623957,3.90446773550542,2.86123427936785,2.47088908274958,4.51725025993587,3.72304274723377,2.37806364734604,4.47218509444333,3.93831930152999,1.68342681497322,3.79632057997357,4.33419722452479,2.45538625901814,6.19747364743864,4.62975866354739,5.24602213669686,3.27504251823572,3.00819475667618,1.91288332068843,2.20591419119516,1.85494268496337 | ||
|short_description=p4@Samd14 | |short_description=p4@Samd14 | ||
}} | }} |
Revision as of 16:02, 14 November 2012
Short description: | p4@Samd14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Samd14_5end |
Coexpression cluster: | MCL_coexpression_mm9:883 |
Association with transcript: | 16bp_to_ENSMUST00000128512_5end |
EntrezGene: | Samd14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.55e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.55e-13 | 23 |
neuron | 5.47e-12 | 33 |
neuronal stem cell | 5.47e-12 | 33 |
neuroblast | 5.47e-12 | 33 |
electrically signaling cell | 5.47e-12 | 33 |
neural cell | 1.79e-09 | 43 |
ectodermal cell | 1.96e-09 | 44 |
neurectodermal cell | 1.96e-09 | 44 |
electrically responsive cell | 3.58e-08 | 39 |
electrically active cell | 3.58e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.38e-15 | 64 |
neural plate | 4.38e-15 | 64 |
presumptive neural plate | 4.38e-15 | 64 |
central nervous system | 5.64e-15 | 73 |
nervous system | 9.13e-14 | 75 |
ectoderm-derived structure | 3.61e-12 | 95 |
ectoderm | 3.61e-12 | 95 |
presumptive ectoderm | 3.61e-12 | 95 |
neural tube | 7.95e-12 | 52 |
neural rod | 7.95e-12 | 52 |
future spinal cord | 7.95e-12 | 52 |
neural keel | 7.95e-12 | 52 |
regional part of nervous system | 8.34e-12 | 54 |
ecto-epithelium | 1.22e-11 | 73 |
pre-chordal neural plate | 1.95e-10 | 49 |
brain | 4.38e-09 | 47 |
future brain | 4.38e-09 | 47 |
regional part of brain | 9.47e-09 | 46 |
structure with developmental contribution from neural crest | 4.06e-08 | 92 |
anterior neural tube | 1.14e-07 | 40 |
embryo | 1.71e-07 | 320 |
gray matter | 1.74e-07 | 34 |
regional part of forebrain | 3.11e-07 | 39 |
forebrain | 3.11e-07 | 39 |
future forebrain | 3.11e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.