FFCP PHASE1:Mm9::chr17:36408299..36408310,-: Difference between revisions
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|id=chr17:36408299..36408310,- | |id=chr17:36408299..36408310,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.09e-10,9;CL:0000815,2.11e-07,1;CL:0000792,2.11e-07,1;CL:0000624,3.01e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.67e-18,3;DOID:4045,2.67e-18,3;DOID:0050686,1.93e-09,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.09e-10,9;UBERON:0002036,1.09e-10,9;UBERON:0002385,1.09e-10,9;UBERON:0000486,1.09e-10,9;UBERON:0007503,1.09e-10,9;UBERON:0001015,1.09e-10,9;UBERON:0002329,1.09e-10,9;UBERON:0003082,1.09e-10,9;UBERON:0003059,1.09e-10,9;UBERON:0007282,1.09e-10,9;UBERON:0004290,1.09e-10,9;UBERON:0009618,1.09e-10,9;UBERON:0000383,1.21e-09,10;UBERON:0007524,8.76e-09,11;UBERON:0003077,8.76e-09,11;UBERON:0007285,8.76e-09,11 | |||
|phase1_expression=0.320297694209588,1.04692622291808,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,1.54947988129892,0.84473233291,0.936258105287974,0,0.239316476986009,0.513602189793617,1.04904482902797,0,0,0,0,0.411343300817216,0,0.255129870453209,0,0.261199789138935,0,0,1.14846392823004,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0,1.25559489221072,1.5626706890476,1.0470474879476,8.2352408324342,2.04913645487534,2.42755176515577,0,0.202753862439029,1.10128051297009,0,0.218025156380447,0.219686182734472,0,0,0,0.335565212115473,1.45072428402269,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0.420649922702764,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0.52091337055676,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.505445516867349,0,0,0.459804208866946,0,0.60281927134286,0,0,0.468508622798644,0,0,0,0.527853372491847,0,0,0.696504333044333,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.126473074248515,0.147610147979602,0,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.315270288212382,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.646270193198397,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0.292373642219257,0.192423683280659,0.116876902181569,0,0.665957860122194,0.269141569828427,0.503653849092235,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.114870937911227,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0,0,0.220591419119515,0 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|phase1_expression=0.320297694209588,1.04692622291808,0.454999239389536,0.30246421130683,0.500895729946347,0.33575854382378,0.233612640595526,1.54947988129892,0.84473233291,0.936258105287974,0,0.239316476986009,0.513602189793617,1.04904482902797,0,0,0,0,0.411343300817216,0,0.255129870453209,0,0.261199789138935,0,0,1.14846392823004,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0.166234645358492,0,1.25559489221072,1.5626706890476,1.0470474879476,8.2352408324342,2.04913645487534,2.42755176515577,0,0.202753862439029,1.10128051297009,0,0.218025156380447,0.219686182734472,0,0,0,0.335565212115473,1.45072428402269,0,0.771778308107841,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0.420649922702764,0,0,0,0,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0.52091337055676,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0.301445281105245,0,0.125666591329675,0.247194967734374,0,0,0.323533699894818,0.220841518460394,0,0,0,0,0,0,0,0,0.449371918214468,0.915001205637253,0.251308704225729,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0.124406970610093,0.505445516867349,0,0,0.459804208866946,0,0.60281927134286,0,0,0.468508622798644,0,0,0,0.527853372491847,0,0,0.696504333044333,0,0,0,1.02939162845886,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0.114248512609729,1.1270773567308,0,0,0,0.126473074248515,0.147610147979602,0,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.315270288212382,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0.390438744296638,0.646270193198397,0.477937595905104,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0,0.425820255624806,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,0.220528398054962,0.32977250588296,0.161464426695906,0.180938774784468,0,0.164140899745061,0,0,0,0.412773735926445,0.370389054739423,0,0,0.228778173206523,0,0.139951452323658,0,0,0.316335993581135,0.203319467126849,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.129159823477731,0,0,0.2604087696879,0.104859344425711,0,0,0.316011120628178,0,0,0,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0,0.201652370273681,0.292373642219257,0.192423683280659,0.116876902181569,0,0.665957860122194,0.269141569828427,0.503653849092235,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.114870937911227,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0,0,0.290692833264657,0.188218760830661,0,0.182927972872773,0,0.271608227691724,0.561142271657738,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0.499621155875892,0,0,0,0.220591419119515,0 | ||
|short_description=p9@Trim39 | |short_description=p9@Trim39 | ||
}} | }} |
Revision as of 14:40, 14 November 2012
Short description: | p9@Trim39 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Trim39_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 17bp_to_ENSMUST00000113704_5end |
EntrezGene: | Trim39 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.09e-10 | 9 |
regulatory T cell | 2.11e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.11e-07 | 1 |
CD4-positive, alpha-beta T cell | 3.01e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.09e-10 | 9 |
striated muscle tissue | 1.09e-10 | 9 |
muscle tissue | 1.09e-10 | 9 |
multilaminar epithelium | 1.09e-10 | 9 |
epithelial vesicle | 1.09e-10 | 9 |
musculature | 1.09e-10 | 9 |
somite | 1.09e-10 | 9 |
myotome | 1.09e-10 | 9 |
presomitic mesoderm | 1.09e-10 | 9 |
presumptive segmental plate | 1.09e-10 | 9 |
dermomyotome | 1.09e-10 | 9 |
trunk paraxial mesoderm | 1.09e-10 | 9 |
musculature of body | 1.21e-09 | 10 |
dense mesenchyme tissue | 8.76e-09 | 11 |
paraxial mesoderm | 8.76e-09 | 11 |
presumptive paraxial mesoderm | 8.76e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.67e-18 | 3 |
muscle cancer | 2.67e-18 | 3 |
organ system cancer | 1.93e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.