Personal tools

FFCP PHASE1:Mm9::chr6:113574042..113574056,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 7: Line 7:
|id=chr6:113574042..113574056,+
|id=chr6:113574042..113574056,+
|ontology_enrichment_celltype=CL:0000144!6.81e-10!121;CL:0000012!6.81e-10!121;CL:0002371!1.04e-08!118;CL:0000034!2.43e-08!97;CL:0000548!1.71e-07!115;CL:0000004!1.71e-07!115;CL:0000255!1.71e-07!115
|ontology_enrichment_celltype=CL:0000144!6.81e-10!121;CL:0000012!6.81e-10!121;CL:0002371!1.04e-08!118;CL:0000034!2.43e-08!97;CL:0000548!1.71e-07!115;CL:0000004!1.71e-07!115;CL:0000255!1.71e-07!115
|ontology_enrichment_celltype_v019_2=CL:0000034,5.46e-10,97;CL:0000723,1.13e-07,91;CL:0000048,1.13e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.05e-09!73;UBERON:0005743!2.05e-09!73;UBERON:0000073!1.30e-08!75;UBERON:0001016!1.30e-08!75;UBERON:0001049!1.29e-07!52;UBERON:0005068!1.29e-07!52;UBERON:0006241!1.29e-07!52;UBERON:0007135!1.29e-07!52;UBERON:0000064!4.20e-07!99
|ontology_enrichment_uberon=UBERON:0001017!2.05e-09!73;UBERON:0005743!2.05e-09!73;UBERON:0000073!1.30e-08!75;UBERON:0001016!1.30e-08!75;UBERON:0001049!1.29e-07!52;UBERON:0005068!1.29e-07!52;UBERON:0006241!1.29e-07!52;UBERON:0007135!1.29e-07!52;UBERON:0000064!4.20e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.97e-07,73
|phase1_expression=0.80074423552397,5.93258192986914,5.45999087267443,3.32710632437513,2.00358291978539,2.85394762250213,2.33612640595526,2.1950964985068,7.32101355188667,8.66038747391376,2.05461561870606,1.43589886191606,2.9104124088305,2.01066925563694,0.333109761815663,0,0,0.630924330716475,0.959801035240171,1.69755860719212,1.53077922271926,0.297872853602656,0.783599367416806,0.799962113967033,1.83527424853736,4.01962374880514,1.7230479846363,3.44753972297422,1.14014051673824,1.26015064879965,0.443461021310609,1.27006134691926,1.23012957516914,0,1.1554064790051,0.831173226792462,1.42918549383658,8.78916424547506,3.906676722619,4.18818995179039,4.70585190424811,8.19654581950135,5.34061388334269,0.251793635951155,0.405507724878058,0.550640256485045,0.782391344348039,1.09012578190223,1.31811709640683,0.972149495371417,0.279972843250725,0,2.68452169692378,2.17608642603403,1.34437519656986,0.771778308107841,0.286533439938757,0,1.01158230429799,2.11596391708813,2.53532561402472,0,0,0.899899717281399,1.97773272513395,2.8419204597844,2.69640099466564,4.2264013585371,0.829516898467821,1.21505344498522,0.630974884054146,2.57085885963423,3.09215957332259,0.489963196859816,1.62937300731002,0.919218786610021,1.10115880999389,1.0214987046815,1.68967186581868,1.45074916503213,1.64677758484337,1.04182674111352,1.67509799400829,1.12552522006336,0.763991238884051,3.24091444021034,2.84743361598206,3.16879057903011,0.302904773332736,0.377857800533928,2.02905142091174,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.421333260395256,0.340860645156116,0.779358013808606,1.06001872353102,0.563373679106722,1.28326477414318,0,0,1.08245520505607,2.02687892380079,0.505524445014783,0.91347103775248,2.58937883647172,0.593768556259299,0.693941307064543,1.21786191324856,0.461230994512117,0.301445281105245,0.940709657085638,0.251333182659351,2.22475470960936,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0.585561594023094,1.04723353406728,1.02182822083437,2.15667224110656,1.79970819298022,1.52484272487678,2.24685959107234,1.83000241127451,0.376963056338593,1.21677024134594,2.04572365864264,1.87009240103604,0.973447578406546,0.407357455401265,0.248813941220186,0.505445516867349,0.420883711772948,0.910843100738926,0.229902104433473,1.80062129805349,0.60281927134286,0.408218994907967,1.0249097622788,0.374806898238915,0.517406741478031,1.07783996466421,0.567318240503458,0.703804496655795,1.7535658594206,1.39023624612799,0.348252166522167,1.02891068203972,1.59227413454795,0.702213187313235,1.54408744268829,2.27330799516474,0.621377317606506,1.64168241986767,0.540186184383045,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0.116765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.146199987425332,0,0.268412837520744,1.68231958851302,1.02904612379284,0,0.528901133327089,1.06644125267617,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,0.570676878337677,1.42358718463353,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0.216138049874694,1.1948476395262,0.379335801906163,0.685491075658373,0,1.4255592949172,0.387904974335251,0.561086559122548,0.379419222745544,0.295220295959204,0,0.123397163921801,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,0.972811360650212,0,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,1.47802552133284,2.84237117655727,0.651859905768103,0.848725428875941,0.234690248288502,0.837531287209079,1.19021820443007,0.780534591431195,0.630540576424764,0.44292937929755,0.797273843287435,0.491589944147214,0.518054945597687,0.867894351489069,0,2.17562273527484,0.983528546038072,0,0.963303539926752,1.17211686592203,0.983609672260053,0.252470927204373,1.26203287766503,0.390438744296638,1.72338718186239,0.716906393857656,0.891194696329576,0.566153061577665,2.02405350837447,2.04579100537918,1.58115111178609,1.60660658210904,0.709700426041343,0.178065603667255,0,1.31976098378028,0,0.728341908464944,1.51161778482376,0.377210159511796,0.590603785761546,0.614870295887855,1.29214146584111,0.727067458955011,0,0,0,0,1.70219802876894,1.8006109403131,1.29358683782755,0.857348140126369,0.886701168211368,0.356737635204141,0.987294123612726,0.913394847343798,1.17335854031855,6.14313005505079,0,0.65954501176592,0.161464426695906,0.361877549568935,0.119372344003136,0.164140899745061,0.874442509889552,2.59595422814714,0.683483523191411,0.412773735926445,0.370389054739423,0.565105371014073,0.546776910884101,0.457556346413045,2.88963330989554,2.37917468950219,3.59319931891502,0,1.58167996790568,1.01659733563424,1.08005340821801,0.627264888043406,0.436725127492355,0,0.743881101528023,0.785267825952089,0.388844919875379,0.621339313086926,15.2197093444731,0.897099276263873,0.827292452285488,0.583353565032143,0.774958940866387,0.844780627453891,1.17357238645754,1.95306577265925,2.72634295506848,2.17425708743405,5.76060012515731,1.58005560314089,1.01362607645082,0.718976700153791,1.16928740680016,0.895133478337407,1.58945083825012,0.721172697119813,1.18151621739662,1.21159739937777,0.609654453239999,0.907435666231565,0.974578807397524,1.44317762460494,1.05189211963412,0.680191150845634,1.77588762699252,2.06341870201794,1.34307693091263,0.579568782096571,0.93841237725591,1.46521299413812,0.428736758158132,0.501572104035363,1.6942555278512,3.22227665555024,0.572895513439397,2.749650917499,2.74033007908257,1.5107877947794,2.02506750069542,2.70192721934532,0.906284817968409,1.03552062350364,2.17953429926771,1.99512436700516,0.853668028770671,0.972426868273176,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.565879024158229,0.280924522409647,0.384150914429216,0.689225627467359,0,0.695305955669133,0.578727661391115,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.726732083161643,0.470546902076653,0.25384382367503,0.914639864363863,0.526139422875686,0.407412341537585,0,0.355905054372522,0.689531376628944,0,0.929621047115796,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0.57386499620653,0.661774257358546,1.15933917810211
|phase1_expression=0.80074423552397,5.93258192986914,5.45999087267443,3.32710632437513,2.00358291978539,2.85394762250213,2.33612640595526,2.1950964985068,7.32101355188667,8.66038747391376,2.05461561870606,1.43589886191606,2.9104124088305,2.01066925563694,0.333109761815663,0,0,0.630924330716475,0.959801035240171,1.69755860719212,1.53077922271926,0.297872853602656,0.783599367416806,0.799962113967033,1.83527424853736,4.01962374880514,1.7230479846363,3.44753972297422,1.14014051673824,1.26015064879965,0.443461021310609,1.27006134691926,1.23012957516914,0,1.1554064790051,0.831173226792462,1.42918549383658,8.78916424547506,3.906676722619,4.18818995179039,4.70585190424811,8.19654581950135,5.34061388334269,0.251793635951155,0.405507724878058,0.550640256485045,0.782391344348039,1.09012578190223,1.31811709640683,0.972149495371417,0.279972843250725,0,2.68452169692378,2.17608642603403,1.34437519656986,0.771778308107841,0.286533439938757,0,1.01158230429799,2.11596391708813,2.53532561402472,0,0,0.899899717281399,1.97773272513395,2.8419204597844,2.69640099466564,4.2264013585371,0.829516898467821,1.21505344498522,0.630974884054146,2.57085885963423,3.09215957332259,0.489963196859816,1.62937300731002,0.919218786610021,1.10115880999389,1.0214987046815,1.68967186581868,1.45074916503213,1.64677758484337,1.04182674111352,1.67509799400829,1.12552522006336,0.763991238884051,3.24091444021034,2.84743361598206,3.16879057903011,0.302904773332736,0.377857800533928,2.02905142091174,0,1.3599426674155,0.539703191637817,0.649776417447669,0,0.421333260395256,0.340860645156116,0.779358013808606,1.06001872353102,0.563373679106722,1.28326477414318,0,0,1.08245520505607,2.02687892380079,0.505524445014783,0.91347103775248,2.58937883647172,0.593768556259299,0.693941307064543,1.21786191324856,0.461230994512117,0.301445281105245,0.940709657085638,0.251333182659351,2.22475470960936,0.578397427679647,0.884610551949874,0,0.220841518460394,0,0,0.585561594023094,1.04723353406728,1.02182822083437,2.15667224110656,1.79970819298022,1.52484272487678,2.24685959107234,1.83000241127451,0.376963056338593,1.21677024134594,2.04572365864264,1.87009240103604,0.973447578406546,0.407357455401265,0.248813941220186,0.505445516867349,0.420883711772948,0.910843100738926,0.229902104433473,1.80062129805349,0.60281927134286,0.408218994907967,1.0249097622788,0.374806898238915,0.517406741478031,1.07783996466421,0.567318240503458,0.703804496655795,1.7535658594206,1.39023624612799,0.348252166522167,1.02891068203972,1.59227413454795,0.702213187313235,1.54408744268829,2.27330799516474,0.621377317606506,1.64168241986767,0.540186184383045,0.23674473558521,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0.116765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.146199987425332,0,0.268412837520744,1.68231958851302,1.02904612379284,0,0.528901133327089,1.06644125267617,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,0.570676878337677,1.42358718463353,0.329397909448022,0,0.397912944082302,0.38992817423824,0,0.216138049874694,1.1948476395262,0.379335801906163,0.685491075658373,0,1.4255592949172,0.387904974335251,0.561086559122548,0.379419222745544,0.295220295959204,0,0.123397163921801,0,0,0,0.224862112384854,0.405720242777006,0.241177159752417,1.01850340712568,0.575392274901621,0.972811360650212,0,0,0,0.312037673114561,0.252578877947112,0,0.482443521363367,1.47802552133284,2.84237117655727,0.651859905768103,0.848725428875941,0.234690248288502,0.837531287209079,1.19021820443007,0.780534591431195,0.630540576424764,0.44292937929755,0.797273843287435,0.491589944147214,0.518054945597687,0.867894351489069,0,2.17562273527484,0.983528546038072,0,0.963303539926752,1.17211686592203,0.983609672260053,0.252470927204373,1.26203287766503,0.390438744296638,1.72338718186239,0.716906393857656,0.891194696329576,0.566153061577665,2.02405350837447,2.04579100537918,1.58115111178609,1.60660658210904,0.709700426041343,0.178065603667255,0,1.31976098378028,0,0.728341908464944,1.51161778482376,0.377210159511796,0.590603785761546,0.614870295887855,1.29214146584111,0.727067458955011,0,0,0,0,1.70219802876894,1.8006109403131,1.29358683782755,0.857348140126369,0.886701168211368,0.356737635204141,0.987294123612726,0.913394847343798,1.17335854031855,6.14313005505079,0,0.65954501176592,0.161464426695906,0.361877549568935,0.119372344003136,0.164140899745061,0.874442509889552,2.59595422814714,0.683483523191411,0.412773735926445,0.370389054739423,0.565105371014073,0.546776910884101,0.457556346413045,2.88963330989554,2.37917468950219,3.59319931891502,0,1.58167996790568,1.01659733563424,1.08005340821801,0.627264888043406,0.436725127492355,0,0.743881101528023,0.785267825952089,0.388844919875379,0.621339313086926,15.2197093444731,0.897099276263873,0.827292452285488,0.583353565032143,0.774958940866387,0.844780627453891,1.17357238645754,1.95306577265925,2.72634295506848,2.17425708743405,5.76060012515731,1.58005560314089,1.01362607645082,0.718976700153791,1.16928740680016,0.895133478337407,1.58945083825012,0.721172697119813,1.18151621739662,1.21159739937777,0.609654453239999,0.907435666231565,0.974578807397524,1.44317762460494,1.05189211963412,0.680191150845634,1.77588762699252,2.06341870201794,1.34307693091263,0.579568782096571,0.93841237725591,1.46521299413812,0.428736758158132,0.501572104035363,1.6942555278512,3.22227665555024,0.572895513439397,2.749650917499,2.74033007908257,1.5107877947794,2.02506750069542,2.70192721934532,0.906284817968409,1.03552062350364,2.17953429926771,1.99512436700516,0.853668028770671,0.972426868273176,0.419226325255965,0.551530525350042,0.44449345560323,0.412070114477788,0,0.252697211763798,0.50695859978048,0.565879024158229,0.280924522409647,0.384150914429216,0.689225627467359,0,0.695305955669133,0.578727661391115,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.726732083161643,0.470546902076653,0.25384382367503,0.914639864363863,0.526139422875686,0.407412341537585,0,0.355905054372522,0.689531376628944,0,0.929621047115796,0.192906610981141,0.999242311751784,0.701794825336225,0.429742108096597,0.57386499620653,0.661774257358546,1.15933917810211
|short_description=p3@Vhl
|short_description=p3@Vhl
}}
}}

Revision as of 14:13, 14 November 2012

Short description:p3@Vhl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Vhl_5end
Coexpression cluster:NA
Association with transcript: 27bp_to_NM_009507, uc009dha.1_5end
EntrezGene:Vhl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Vhl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.44
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.20
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H45.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A82.22
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.07
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A31.17
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.17
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D92.73
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.21
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.70
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I82.18
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell5.46e-1097
somatic stem cell1.13e-0791
multi fate stem cell1.13e-0791

Uber anatomy
Ontology termp-valuen
central nervous system2.97e-0773







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:113574042..113574056,%2B&oldid=2323956"