FFCP PHASE1:Mm9::chr7:53651618..53651628,+: Difference between revisions
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|id=chr7:53651618..53651628,+ | |id=chr7:53651618..53651628,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!3.53e-10!6;UBERON:0004121!2.49e-09!102;UBERON:0000924!2.49e-09!102;UBERON:0006601!2.49e-09!102;UBERON:0000033!1.47e-08!63;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0000955!2.97e-08!50;UBERON:0006238!2.97e-08!50;UBERON:0000073!4.43e-08!75;UBERON:0001016!4.43e-08!75;UBERON:0001049!1.20e-07!52;UBERON:0005068!1.20e-07!52;UBERON:0006241!1.20e-07!52;UBERON:0007135!1.20e-07!52;UBERON:0002616!1.56e-07!49;UBERON:0002346!1.93e-07!71;UBERON:0003075!1.93e-07!71;UBERON:0007284!1.93e-07!71;UBERON:0002950!4.46e-07!4;UBERON:0001891!4.46e-07!4;UBERON:0009616!4.46e-07!4 | |ontology_enrichment_uberon=UBERON:0002298!3.53e-10!6;UBERON:0004121!2.49e-09!102;UBERON:0000924!2.49e-09!102;UBERON:0006601!2.49e-09!102;UBERON:0000033!1.47e-08!63;UBERON:0001017!1.73e-08!73;UBERON:0005743!1.73e-08!73;UBERON:0000955!2.97e-08!50;UBERON:0006238!2.97e-08!50;UBERON:0000073!4.43e-08!75;UBERON:0001016!4.43e-08!75;UBERON:0001049!1.20e-07!52;UBERON:0005068!1.20e-07!52;UBERON:0006241!1.20e-07!52;UBERON:0007135!1.20e-07!52;UBERON:0002616!1.56e-07!49;UBERON:0002346!1.93e-07!71;UBERON:0003075!1.93e-07!71;UBERON:0007284!1.93e-07!71;UBERON:0002950!4.46e-07!4;UBERON:0001891!4.46e-07!4;UBERON:0009616!4.46e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,2.82e-17,6;UBERON:0004732,2.82e-17,6;UBERON:0002028,2.82e-17,6;UBERON:0007277,2.82e-17,6;UBERON:0003076,3.59e-15,12;UBERON:0003057,3.59e-15,12;UBERON:0001374,2.01e-12,1;UBERON:0004252,2.01e-12,1;UBERON:0003663,2.01e-12,1;UBERON:0005090,2.01e-12,1;UBERON:0001630,2.01e-12,1;UBERON:0003661,2.01e-12,1;UBERON:0010890,2.01e-12,1;UBERON:0001383,2.01e-12,1;UBERON:0002037,2.95e-12,4;UBERON:0002680,2.95e-12,4;UBERON:0001895,2.95e-12,4;UBERON:0010092,2.95e-12,4;UBERON:0006215,2.95e-12,4;UBERON:0001723,3.34e-12,1;UBERON:0001033,3.34e-12,1;UBERON:0010056,3.34e-12,1;UBERON:0002259,7.11e-12,1;UBERON:0002314,7.11e-12,1;UBERON:0004061,7.11e-12,1;UBERON:0006777,7.11e-12,1;UBERON:0005882,7.11e-12,1;UBERON:0001049,1.23e-07,52;UBERON:0005068,1.23e-07,52;UBERON:0006241,1.23e-07,52;UBERON:0007135,1.23e-07,52;UBERON:0000165,9.80e-07,2;UBERON:0000166,9.80e-07,2;UBERON:0000930,9.80e-07,2 | |||
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|short_description=p11@Kcnc1 | |short_description=p11@Kcnc1 | ||
}} | }} |
Revision as of 11:35, 14 November 2012
Short description: | p11@Kcnc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Kcnc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -209bp_to_NM_008421, uc009gyn.2, uc009gyo.2_5end |
EntrezGene: | Kcnc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 2.82e-17 | 6 |
segmental subdivision of nervous system | 2.82e-17 | 6 |
hindbrain | 2.82e-17 | 6 |
presumptive hindbrain | 2.82e-17 | 6 |
posterior neural tube | 3.59e-15 | 12 |
chordal neural plate | 3.59e-15 | 12 |
biceps femoris | 2.01e-12 | 1 |
hindlimb stylopod muscle | 2.01e-12 | 1 |
hindlimb muscle | 2.01e-12 | 1 |
muscle structure | 2.01e-12 | 1 |
muscle organ | 2.01e-12 | 1 |
limb muscle | 2.01e-12 | 1 |
pelvic complex muscle | 2.01e-12 | 1 |
muscle of leg | 2.01e-12 | 1 |
cerebellum | 2.95e-12 | 4 |
regional part of metencephalon | 2.95e-12 | 4 |
metencephalon | 2.95e-12 | 4 |
future metencephalon | 2.95e-12 | 4 |
rhombic lip | 2.95e-12 | 4 |
tongue | 3.34e-12 | 1 |
gustatory system | 3.34e-12 | 1 |
future tongue | 3.34e-12 | 1 |
corpora quadrigemina | 7.11e-12 | 1 |
midbrain tectum | 7.11e-12 | 1 |
neural tube mantle layer | 7.11e-12 | 1 |
tectal plate | 7.11e-12 | 1 |
neural tube alar plate | 7.11e-12 | 1 |
neural tube | 1.23e-07 | 52 |
neural rod | 1.23e-07 | 52 |
future spinal cord | 1.23e-07 | 52 |
neural keel | 1.23e-07 | 52 |
mouth | 9.80e-07 | 2 |
oral opening | 9.80e-07 | 2 |
stomodeum | 9.80e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.