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FFCP PHASE1:Mm9::chr11:103510844..103510871,+: Difference between revisions

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|id=chr11:103510844..103510871,+
|id=chr11:103510844..103510871,+
|ontology_enrichment_celltype=CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000117!2.78e-09!23;CL:0000337!2.78e-09!23;CL:0000393!6.35e-08!39;CL:0000211!6.35e-08!39;CL:0002319!1.15e-07!43;CL:0000221!3.17e-07!44;CL:0000133!3.17e-07!44
|ontology_enrichment_celltype=CL:0000540!1.39e-11!33;CL:0000047!1.39e-11!33;CL:0000031!1.39e-11!33;CL:0000404!1.39e-11!33;CL:0000117!2.78e-09!23;CL:0000337!2.78e-09!23;CL:0000393!6.35e-08!39;CL:0000211!6.35e-08!39;CL:0002319!1.15e-07!43;CL:0000221!3.17e-07!44;CL:0000133!3.17e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000540,9.56e-09,33;CL:0000047,9.56e-09,33;CL:0000031,9.56e-09,33;CL:0000404,9.56e-09,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.30e-22!75;UBERON:0001016!6.30e-22!75;UBERON:0001017!9.92e-22!73;UBERON:0005743!9.92e-22!73;UBERON:0000955!9.77e-19!50;UBERON:0006238!9.77e-19!50;UBERON:0001049!2.65e-18!52;UBERON:0005068!2.65e-18!52;UBERON:0006241!2.65e-18!52;UBERON:0007135!2.65e-18!52;UBERON:0002616!5.28e-18!49;UBERON:0002020!4.20e-16!34;UBERON:0003080!1.63e-15!40;UBERON:0002780!4.43e-15!39;UBERON:0001890!4.43e-15!39;UBERON:0006240!4.43e-15!39;UBERON:0002791!1.90e-14!29;UBERON:0003528!1.90e-14!29;UBERON:0001893!1.90e-14!29;UBERON:0002346!5.86e-13!71;UBERON:0003075!5.86e-13!71;UBERON:0007284!5.86e-13!71;UBERON:0004121!1.12e-12!102;UBERON:0000924!1.12e-12!102;UBERON:0006601!1.12e-12!102;UBERON:0000033!2.71e-12!63;UBERON:0003056!2.49e-11!49;UBERON:0000956!1.14e-10!21;UBERON:0001869!1.14e-10!21;UBERON:0000203!1.14e-10!21;UBERON:0002619!5.75e-10!17;UBERON:0002021!2.51e-09!10;UBERON:0000411!2.51e-09!10;UBERON:0001950!2.51e-09!10
|ontology_enrichment_uberon=UBERON:0000073!6.30e-22!75;UBERON:0001016!6.30e-22!75;UBERON:0001017!9.92e-22!73;UBERON:0005743!9.92e-22!73;UBERON:0000955!9.77e-19!50;UBERON:0006238!9.77e-19!50;UBERON:0001049!2.65e-18!52;UBERON:0005068!2.65e-18!52;UBERON:0006241!2.65e-18!52;UBERON:0007135!2.65e-18!52;UBERON:0002616!5.28e-18!49;UBERON:0002020!4.20e-16!34;UBERON:0003080!1.63e-15!40;UBERON:0002780!4.43e-15!39;UBERON:0001890!4.43e-15!39;UBERON:0006240!4.43e-15!39;UBERON:0002791!1.90e-14!29;UBERON:0003528!1.90e-14!29;UBERON:0001893!1.90e-14!29;UBERON:0002346!5.86e-13!71;UBERON:0003075!5.86e-13!71;UBERON:0007284!5.86e-13!71;UBERON:0004121!1.12e-12!102;UBERON:0000924!1.12e-12!102;UBERON:0006601!1.12e-12!102;UBERON:0000033!2.71e-12!63;UBERON:0003056!2.49e-11!49;UBERON:0000956!1.14e-10!21;UBERON:0001869!1.14e-10!21;UBERON:0000203!1.14e-10!21;UBERON:0002619!5.75e-10!17;UBERON:0002021!2.51e-09!10;UBERON:0000411!2.51e-09!10;UBERON:0001950!2.51e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.48e-26,73;UBERON:0000073,4.03e-25,54;UBERON:0001016,8.49e-25,75;UBERON:0001049,1.19e-22,52;UBERON:0005068,1.19e-22,52;UBERON:0006241,1.19e-22,52;UBERON:0007135,1.19e-22,52;UBERON:0003080,3.92e-22,40;UBERON:0000955,7.87e-22,47;UBERON:0006238,7.87e-22,47;UBERON:0002780,2.17e-21,39;UBERON:0001890,2.17e-21,39;UBERON:0006240,2.17e-21,39;UBERON:0002616,1.10e-20,46;UBERON:0002020,2.56e-20,34;UBERON:0002346,4.45e-20,64;UBERON:0003075,4.45e-20,64;UBERON:0007284,4.45e-20,64;UBERON:0003528,1.77e-19,29;UBERON:0002791,1.77e-19,29;UBERON:0001893,1.77e-19,29;UBERON:0002619,1.38e-17,17;UBERON:0004121,9.56e-17,95;UBERON:0000924,9.56e-17,95;UBERON:0006601,9.56e-17,95;UBERON:0003056,2.37e-16,49;UBERON:0010371,3.46e-16,73;UBERON:0000956,2.20e-15,21;UBERON:0001869,2.20e-15,21;UBERON:0000203,2.20e-15,21;UBERON:0002021,3.22e-15,10;UBERON:0000411,3.22e-15,10;UBERON:0001950,3.22e-15,10;UBERON:0010314,1.40e-10,92;UBERON:0000025,1.14e-07,114;UBERON:0011216,3.13e-07,194
|phase1_expression=0,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,3.86122325397347,5.37309073369709,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,5.27268398936633,0,0,1.59992422793407,2.2940928106717,0,0.86152399231815,1.29282739611533,1.52018735565099,1.51218077855958,2.66076612786366,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.945041568321835,0.210324961351382,1.99955689082663,2.65042249141936,3.06226998037385,1.72521847832825,5.51531271966013,7.70811166995721,5.61824287574826,3.07213066512487,0.659431438650969,0.365950574409639,1.04182674111352,1.95428099300967,3.93933827022176,8.09830713217094,0.883885756421003,1.70846016958924,0.186399445825301,0.075726193333184,0.68014404096107,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0.484875253135222,0,1.17112318804619,0.41889341362691,0.766371165625774,0,0,0,1.49790639404823,25.6200337578431,8.54449594367478,25.7259993884569,29.407277592988,6.2336413367868,17.3598151482501,0.101839363850316,0.373220911830279,2.77995034277042,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,36.380161101594,18.0083071663748,0,0.793351699990633,0,0,0,0.201683524623343,0,0.951128130562796,0.474529061544512,0.823494773620054,2.01068167040216,1.39269530428806,1.16978452271472,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40179147216586,0,0,0,0,0,0,0,0,0,0.318909537314974,1.14704320301017,1.20879487306127,1.88043776155965,0,0,0,0.275936746304732,1.60550589987792,0.937693492737625,0,0,1.26203287766503,2.34263246577983,3.01592756825919,0.238968797952552,0.222798674082394,0.283076530788832,2.02405350837447,2.33804686329049,3.55759000151871,28.276275845119,0.141940085208269,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0,0,0,0,2.04263763452273,0,0,0,1.06404140185364,1.24858172321449,0.493647061806363,1.8267896946876,0.23467170806371,1.90648863777438,0,0.65954501176592,0,0,0.119372344003136,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.518459893167171,0,1.12738587736838,0.897099276263873,1.15820943319968,2.91676782516071,3.87479470433193,4.89972763923257,1.99507305697782,1.95306577265925,3.46035836604846,2.41584120826006,0.864090018773596,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0,0,0.563047426353546,0,0,0,38.4031252979605,58.9216302729186,54.9979692901821,71.490923854974,53.4364365421101,46.8344216381614,50.6266875173854,45.9327627288705,33.9856806738153,38.3142630696347,0,0,0,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.561849044819294,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.964546102318525,0.412085900803307,0.147198920134397,2.74295401908332,0.70990322463735,0,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0
|phase1_expression=0,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,3.86122325397347,5.37309073369709,0,0,0.234064526321993,0,0.0797721589953364,0,0,0,0,0,0,0,0,5.27268398936633,0,0,1.59992422793407,2.2940928106717,0,0.86152399231815,1.29282739611533,1.52018735565099,1.51218077855958,2.66076612786366,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.945041568321835,0.210324961351382,1.99955689082663,2.65042249141936,3.06226998037385,1.72521847832825,5.51531271966013,7.70811166995721,5.61824287574826,3.07213066512487,0.659431438650969,0.365950574409639,1.04182674111352,1.95428099300967,3.93933827022176,8.09830713217094,0.883885756421003,1.70846016958924,0.186399445825301,0.075726193333184,0.68014404096107,0,0,0,0,0,0,1.82577746171277,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0,0.484875253135222,0,1.17112318804619,0.41889341362691,0.766371165625774,0,0,0,1.49790639404823,25.6200337578431,8.54449594367478,25.7259993884569,29.407277592988,6.2336413367868,17.3598151482501,0.101839363850316,0.373220911830279,2.77995034277042,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0.258703370739016,0,0.189106080167819,0,0,0.556094498451196,0,0,0.59710280045548,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,36.380161101594,18.0083071663748,0,0.793351699990633,0,0,0,0.201683524623343,0,0.951128130562796,0.474529061544512,0.823494773620054,2.01068167040216,1.39269530428806,1.16978452271472,0,0.648414149624083,0.796565093017469,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40179147216586,0,0,0,0,0,0,0,0,0,0.318909537314974,1.14704320301017,1.20879487306127,1.88043776155965,0,0,0,0.275936746304732,1.60550589987792,0.937693492737625,0,0,1.26203287766503,2.34263246577983,3.01592756825919,0.238968797952552,0.222798674082394,0.283076530788832,2.02405350837447,2.33804686329049,3.55759000151871,28.276275845119,0.141940085208269,0,0,0,0,0,0,0.377210159511796,0.295301892880773,0,0.516856586336442,0,0,0,0,0,2.04263763452273,0,0,0,1.06404140185364,1.24858172321449,0.493647061806363,1.8267896946876,0.23467170806371,1.90648863777438,0,0.65954501176592,0,0,0.119372344003136,0,0.291480836629851,1.48340241608408,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.518459893167171,0,1.12738587736838,0.897099276263873,1.15820943319968,2.91676782516071,3.87479470433193,4.89972763923257,1.99507305697782,1.95306577265925,3.46035836604846,2.41584120826006,0.864090018773596,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.179427713218951,0,0,0.563047426353546,0,0,0,38.4031252979605,58.9216302729186,54.9979692901821,71.490923854974,53.4364365421101,46.8344216381614,50.6266875173854,45.9327627288705,33.9856806738153,38.3142630696347,0,0,0,0,0.209613162627982,0.367687016900028,0.666740183404846,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.561849044819294,0.192075457214608,0.17230640686684,0.952587382566147,0.347652977834566,0.964546102318525,0.412085900803307,0.147198920134397,2.74295401908332,0.70990322463735,0,0.290692833264657,0.188218760830661,0.169229215783353,0.182927972872773,0,0.271608227691724,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.192906610981141,0.249810577937946,0,0.429742108096597,0.191288332068843,0,0
|short_description=p1@Rprml
|short_description=p1@Rprml
}}
}}

Revision as of 11:29, 14 November 2012

Short description:p1@Rprml
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rprml_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 21bp_to_ENSMUST00000057870, NM_001033212, uc007lvn.1_5end
EntrezGene:Rprml
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rprml

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.06
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D825.62
corpus striatum, neonate N00.CNhs11226.630-43F18.54
cortex, adult.CNhs10473.12-14D525.73
cortex, neonate N30.CNhs11107.1392-42F229.41
diencephalon, adult.CNhs10482.20-12F26.23
diencephalon, neonate N30.CNhs11201.1388-42B217.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E836.38
hippocampus, neonate N00.CNhs11228.627-43G118.01
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.88
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I928.28
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.87
testis, embryo E18.CNhs11027.503-18G54.90
testis, neonate N00.CNhs11189.1300-22B72.00
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D93.46
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A138.40
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A258.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A355.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D771.49
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A453.44
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A650.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A745.93
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.31
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron9.56e-0933
neuronal stem cell9.56e-0933
neuroblast9.56e-0933
electrically signaling cell9.56e-0933

Uber anatomy
Ontology termp-valuen
central nervous system7.48e-2673
regional part of nervous system4.03e-2554
nervous system8.49e-2575
neural tube1.19e-2252
neural rod1.19e-2252
future spinal cord1.19e-2252
neural keel1.19e-2252
anterior neural tube3.92e-2240
brain7.87e-2247
future brain7.87e-2247
regional part of forebrain2.17e-2139
forebrain2.17e-2139
future forebrain2.17e-2139
regional part of brain1.10e-2046
gray matter2.56e-2034
neurectoderm4.45e-2064
neural plate4.45e-2064
presumptive neural plate4.45e-2064
brain grey matter1.77e-1929
regional part of telencephalon1.77e-1929
telencephalon1.77e-1929
regional part of cerebral cortex1.38e-1717
ectoderm-derived structure9.56e-1795
ectoderm9.56e-1795
presumptive ectoderm9.56e-1795
pre-chordal neural plate2.37e-1649
ecto-epithelium3.46e-1673
cerebral cortex2.20e-1521
cerebral hemisphere2.20e-1521
pallium2.20e-1521
occipital lobe3.22e-1510
visual cortex3.22e-1510
neocortex3.22e-1510
structure with developmental contribution from neural crest1.40e-1092
tube1.14e-07114
organ system subdivision3.13e-07194







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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