FFCP PHASE1:Mm9::chr17:6106908..6106922,+: Difference between revisions
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|id=chr17:6106908..6106922,+ | |id=chr17:6106908..6106922,+ | ||
|ontology_enrichment_celltype=CL:0000393!1.41e-15!39;CL:0000211!1.41e-15!39;CL:0000055!3.07e-13!50;CL:0000540!9.91e-13!33;CL:0000047!9.91e-13!33;CL:0000031!9.91e-13!33;CL:0000404!9.91e-13!33;CL:0002321!4.39e-12!70;CL:0000220!4.39e-12!70;CL:0000221!1.18e-11!44;CL:0000133!1.18e-11!44;CL:0002319!2.22e-11!43;CL:0000117!2.04e-09!23;CL:0000337!2.04e-09!23 | |ontology_enrichment_celltype=CL:0000393!1.41e-15!39;CL:0000211!1.41e-15!39;CL:0000055!3.07e-13!50;CL:0000540!9.91e-13!33;CL:0000047!9.91e-13!33;CL:0000031!9.91e-13!33;CL:0000404!9.91e-13!33;CL:0002321!4.39e-12!70;CL:0000220!4.39e-12!70;CL:0000221!1.18e-11!44;CL:0000133!1.18e-11!44;CL:0002319!2.22e-11!43;CL:0000117!2.04e-09!23;CL:0000337!2.04e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,7.54e-19,39;CL:0000211,7.54e-19,39;CL:0000540,3.90e-15,33;CL:0000047,3.90e-15,33;CL:0000031,3.90e-15,33;CL:0000404,3.90e-15,33;CL:0000221,2.97e-13,44;CL:0000133,2.97e-13,44;CL:0002321,5.13e-13,70;CL:0002319,7.26e-13,43;CL:0000117,1.70e-11,23;CL:0000337,1.70e-11,23;CL:0000034,7.07e-08,97;CL:0000723,1.59e-07,91;CL:0000048,1.59e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.19e-12!75;UBERON:0001016!5.19e-12!75;UBERON:0004121!5.96e-12!102;UBERON:0000924!5.96e-12!102;UBERON:0006601!5.96e-12!102;UBERON:0001017!6.55e-11!73;UBERON:0005743!6.55e-11!73 | |ontology_enrichment_uberon=UBERON:0000073!5.19e-12!75;UBERON:0001016!5.19e-12!75;UBERON:0004121!5.96e-12!102;UBERON:0000924!5.96e-12!102;UBERON:0006601!5.96e-12!102;UBERON:0001017!6.55e-11!73;UBERON:0005743!6.55e-11!73 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.55e-15,95;UBERON:0000924,2.55e-15,95;UBERON:0006601,2.55e-15,95;UBERON:0001016,1.34e-13,75;UBERON:0001017,3.90e-12,73;UBERON:0010371,1.92e-09,73;UBERON:0002346,1.16e-07,64;UBERON:0003075,1.16e-07,64;UBERON:0007284,1.16e-07,64;UBERON:0000073,4.15e-07,54 | |||
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|phase1_expression=1.76163731815273,1.04692622291808,0.909998478779072,0.90739263392049,0,1.17515490338323,1.40167584357315,0,1.68946466582,2.10658073689794,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0.137114433605739,0,1.02051948181284,0.198581902401771,0,0.47997726838022,0.68822784320151,1.14846392823004,0.430761996159075,1.07735616342945,1.14014051673824,0.252030129759931,0.886922042621219,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,14.4781340671914,16.6258167200004,14.5001934207728,0,0,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0.335565212115473,1.45072428402269,1.34437519656986,3.08711323243136,2.0057340795713,0.515672092277442,1.41621522601718,1.05798195854407,4.43681982454325,1.69422266034566,0.889294796111139,1.7997994345628,0,0,0.898800331555214,0.768436610643109,1.8664130215526,2.29510095163874,1.05162480675691,2.28520787523043,1.10434270475807,1.71487118900936,1.15014565221884,0.919218786610021,2.20231761998777,2.55374676170375,1.99688493233117,1.58263545276233,1.28082701043374,1.04182674111352,2.51264699101243,2.25105044012672,2.75036845998258,1.47314292736834,0.854230084794618,1.4911955666024,19.4616316866283,9.52201657345497,0.869593466105033,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,3.06774580640504,1.55871602761721,3.18005617059306,1.26759077799012,5.13305909657271,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.79928715803342,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.125666591329675,1.73036477414062,0.289198713839823,0,0.970601099684455,0.441683036920787,0.484875253135222,0,1.75668478206928,3.77004072264219,1.27728527604296,0.11981512450592,0,0,2.69623150928681,0.915001205637253,1.7591609295801,1.21677024134594,0.255715457330331,1.66230435647648,2.59586020908412,0.611036183101898,0.622034853050465,0.252722758433675,0.420883711772948,0.520481771850815,0.229902104433473,1.0803727788321,0.452114453507145,2.10913147369116,2.69038812598185,2.24884138943349,0.776110112217047,0.646703978798527,1.51284864134255,0.351902248327898,1.09597866213787,0.278047249225598,1.39300866608867,1.02891068203972,0.59710280045548,0,0,0,0.621377317606506,0,0.180062061461015,0.710234206755631,0.393528463494808,0.308534225774757,0.930135779001631,0,1.05088808130453,1.15191894939436,0.656669856316381,1.05389452409612,1.16959989940266,0,0.402619256281115,0.630869845692382,1.13195073617213,0.330418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.77320476793256,1.00841762311671,0.22237804384487,0.951128130562796,0,0.658795818896044,1.00534083520108,0.994782360205754,0.19496408711912,0,0.216138049874694,0.995706366271836,0.189667900953082,0,0,0,0.387904974335251,0.771494018793504,0.632365371242573,0.885660887877613,0.627994911365499,0.370191491765402,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0,0.964887042726734,0.554259570499814,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,1.75620283072019,1.57635144106191,1.7717175171902,0.956728611944923,0.491589944147214,0.690739927463582,0.578596234326046,0,1.08781136763742,0,0,3.85321415970701,4.21962071731931,2.13115428989678,0.504941854408746,1.26203287766503,1.56175497718655,1.72338718186239,0.716906393857656,0.668396022247182,1.69845918473299,2.83367491172426,1.75353514746787,2.76701444562566,1.28528526568723,0.567760340833074,0,0.977321756121456,0.164970122972535,2.65490276679926,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0,0.532020700926821,0.713475270408282,0.658196082408484,0.913394847343798,0,3.60114520468494,0.661585194164886,1.31909002353184,1.13025098687134,1.20625849856312,1.19372344003136,1.31312719796049,1.1659233465194,6.86073617438886,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.540026704109006,0.418176592028937,0,1.34864346384821,0.909188012978695,0.26175594198403,0.518459893167171,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0,1.64300134104056,1.0416350787516,0.314578033277133,0,0.576060012515731,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0,0.292373642219257,0.0962118416403295,0,0.906921534460845,1.77588762699252,1.34570784914214,1.17519231454855,0.579568782096571,0.187682475451182,0.36630324853453,0.857473516316263,1.00314420807073,1.6942555278512,0,0,0.515559547031063,0.685082519770642,0,1.35004500046361,0.900642406448441,0,0,0.415149390336707,1.19707462020309,0.853668028770671,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,0.824140228955577,0.64183841918363,0.758091635291392,0.5069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| ||
|short_description=p5@Tulp4 | |short_description=p5@Tulp4 | ||
}} | }} |
Revision as of 11:13, 14 November 2012
Short description: | p5@Tulp4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tulp4_5end |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | 17bp_to_ENSMUST00000149756_5end |
EntrezGene: | Tulp4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 7.54e-19 | 39 |
electrically active cell | 7.54e-19 | 39 |
neuron | 3.90e-15 | 33 |
neuronal stem cell | 3.90e-15 | 33 |
neuroblast | 3.90e-15 | 33 |
electrically signaling cell | 3.90e-15 | 33 |
ectodermal cell | 2.97e-13 | 44 |
neurectodermal cell | 2.97e-13 | 44 |
embryonic cell | 5.13e-13 | 70 |
neural cell | 7.26e-13 | 43 |
CNS neuron (sensu Vertebrata) | 1.70e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.70e-11 | 23 |
stem cell | 7.07e-08 | 97 |
somatic stem cell | 1.59e-07 | 91 |
multi fate stem cell | 1.59e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.55e-15 | 95 |
ectoderm | 2.55e-15 | 95 |
presumptive ectoderm | 2.55e-15 | 95 |
nervous system | 1.34e-13 | 75 |
central nervous system | 3.90e-12 | 73 |
ecto-epithelium | 1.92e-09 | 73 |
neurectoderm | 1.16e-07 | 64 |
neural plate | 1.16e-07 | 64 |
presumptive neural plate | 1.16e-07 | 64 |
regional part of nervous system | 4.15e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.