FFCP PHASE1:Mm9::chr2:122131407..122131416,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:122131407..122131416,- | |id=chr2:122131407..122131416,- | ||
|ontology_enrichment_celltype=CL:0000068!1.11e-21!3;CL:0002202!1.11e-21!3;CL:0000069!1.11e-21!3;CL:0002632!1.11e-21!3;CL:0002368!1.11e-21!3;CL:0000307!1.11e-21!3;CL:0000377!1.11e-21!3 | |ontology_enrichment_celltype=CL:0000068!1.11e-21!3;CL:0002202!1.11e-21!3;CL:0000069!1.11e-21!3;CL:0002632!1.11e-21!3;CL:0002368!1.11e-21!3;CL:0000307!1.11e-21!3;CL:0000377!1.11e-21!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.69e-52,3;CL:0002202,3.69e-52,3;CL:0000069,3.69e-52,3;CL:0002632,3.69e-52,3;CL:0002368,3.69e-52,3;CL:0000307,3.69e-52,3;CL:0000377,3.69e-52,3;CL:0002076,3.43e-11,15;CL:0000223,1.37e-08,20;CL:0000066,5.13e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!5.57e-22!5;UBERON:0001003!5.57e-22!5;UBERON:0002097!5.57e-22!5;UBERON:0002199!5.57e-22!5;UBERON:0007029!5.57e-22!5;UBERON:0007376!5.57e-22!5;UBERON:0002416!5.57e-22!5;UBERON:0007383!5.57e-22!5;UBERON:0003126!1.11e-21!3;UBERON:0001005!1.11e-21!3;UBERON:0007196!1.11e-21!3;UBERON:0001558!1.11e-21!3;UBERON:0000072!7.89e-09!27;UBERON:0000996!1.56e-08!1;UBERON:0003102!1.88e-07!23;UBERON:0000063!9.79e-07!35 | |ontology_enrichment_uberon=UBERON:0000014!5.57e-22!5;UBERON:0001003!5.57e-22!5;UBERON:0002097!5.57e-22!5;UBERON:0002199!5.57e-22!5;UBERON:0007029!5.57e-22!5;UBERON:0007376!5.57e-22!5;UBERON:0002416!5.57e-22!5;UBERON:0007383!5.57e-22!5;UBERON:0003126!1.11e-21!3;UBERON:0001005!1.11e-21!3;UBERON:0007196!1.11e-21!3;UBERON:0001558!1.11e-21!3;UBERON:0000072!7.89e-09!27;UBERON:0000996!1.56e-08!1;UBERON:0003102!1.88e-07!23;UBERON:0000063!9.79e-07!35 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.69e-52,3;UBERON:0001005,3.69e-52,3;UBERON:0007196,3.69e-52,3;UBERON:0001558,3.69e-52,3;UBERON:0000996,5.15e-19,1;UBERON:0005178,5.72e-10,17;UBERON:0005181,5.72e-10,17;UBERON:0002224,5.72e-10,17;UBERON:0000915,5.72e-10,17;UBERON:0008947,5.72e-10,17;UBERON:0003258,5.72e-10,17;UBERON:0000162,3.18e-07,3;UBERON:0001353,3.18e-07,3;UBERON:0000163,3.18e-07,3;UBERON:0006866,3.18e-07,3;UBERON:0001046,3.18e-07,3;UBERON:0000164,3.18e-07,3;UBERON:0000931,3.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,1.26679932737549,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.0603129249281559,0.238744688006273,1.31312719796049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,1.26679932737549,1.01104889002957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.0603129249281559,0.238744688006273,1.31312719796049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,3.85863082342319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Duoxa1 | |short_description=p3@Duoxa1 | ||
}} | }} |
Revision as of 10:55, 14 November 2012
Short description: | p3@Duoxa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Duoxa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:495 |
Association with transcript: | 30bp_to_ENSMUST00000155561_5end |
EntrezGene: | Duoxa1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.69e-52 | 3 |
epithelial cell of tracheobronchial tree | 3.69e-52 | 3 |
branched duct epithelial cell | 3.69e-52 | 3 |
epithelial cell of lower respiratory tract | 3.69e-52 | 3 |
respiratory epithelial cell | 3.69e-52 | 3 |
tracheal epithelial cell | 3.69e-52 | 3 |
tracheoblast | 3.69e-52 | 3 |
endo-epithelial cell | 3.43e-11 | 15 |
endodermal cell | 1.37e-08 | 20 |
epithelial cell | 5.13e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.69e-52 | 3 |
respiratory airway | 3.69e-52 | 3 |
tracheobronchial tree | 3.69e-52 | 3 |
lower respiratory tract | 3.69e-52 | 3 |
vagina | 5.15e-19 | 1 |
thoracic cavity element | 5.72e-10 | 17 |
thoracic segment organ | 5.72e-10 | 17 |
thoracic cavity | 5.72e-10 | 17 |
thoracic segment of trunk | 5.72e-10 | 17 |
respiratory primordium | 5.72e-10 | 17 |
endoderm of foregut | 5.72e-10 | 17 |
cloaca | 3.18e-07 | 3 |
anal region | 3.18e-07 | 3 |
embryonic cloaca | 3.18e-07 | 3 |
terminal part of digestive tract | 3.18e-07 | 3 |
hindgut | 3.18e-07 | 3 |
primitive urogenital sinus | 3.18e-07 | 3 |
proctodeum | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.