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FFCP PHASE1:Mm9::chr8:70498466..70498495,-: Difference between revisions

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|id=chr8:70498466..70498495,-
|id=chr8:70498466..70498495,-
|ontology_enrichment_celltype=CL:0000393!3.58e-09!39;CL:0000211!3.58e-09!39;CL:0000540!1.04e-08!33;CL:0000047!1.04e-08!33;CL:0000031!1.04e-08!33;CL:0000404!1.04e-08!33;CL:0000117!1.11e-08!23;CL:0000337!1.11e-08!23;CL:0000221!4.77e-08!44;CL:0000133!4.77e-08!44;CL:0000055!7.13e-08!50;CL:0002319!1.11e-07!43
|ontology_enrichment_celltype=CL:0000393!3.58e-09!39;CL:0000211!3.58e-09!39;CL:0000540!1.04e-08!33;CL:0000047!1.04e-08!33;CL:0000031!1.04e-08!33;CL:0000404!1.04e-08!33;CL:0000117!1.11e-08!23;CL:0000337!1.11e-08!23;CL:0000221!4.77e-08!44;CL:0000133!4.77e-08!44;CL:0000055!7.13e-08!50;CL:0002319!1.11e-07!43
|ontology_enrichment_celltype_v019_2=CL:0002610,1.66e-07,3;CL:0000117,4.54e-07,23;CL:0000337,4.54e-07,23;CL:0002614,9.37e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.80e-28!71;UBERON:0003075!9.80e-28!71;UBERON:0007284!9.80e-28!71;UBERON:0004121!2.09e-27!102;UBERON:0000924!2.09e-27!102;UBERON:0006601!2.09e-27!102;UBERON:0000033!5.76e-27!63;UBERON:0000073!7.00e-27!75;UBERON:0001016!7.00e-27!75;UBERON:0001017!3.72e-26!73;UBERON:0005743!3.72e-26!73;UBERON:0001049!7.00e-24!52;UBERON:0005068!7.00e-24!52;UBERON:0006241!7.00e-24!52;UBERON:0007135!7.00e-24!52;UBERON:0000955!5.50e-23!50;UBERON:0006238!5.50e-23!50;UBERON:0002616!2.87e-22!49;UBERON:0003056!2.06e-20!49;UBERON:0003080!7.11e-17!40;UBERON:0002780!3.93e-16!39;UBERON:0001890!3.93e-16!39;UBERON:0006240!3.93e-16!39;UBERON:0002020!1.31e-15!34;UBERON:0007811!4.77e-15!86;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0000153!1.93e-12!94;UBERON:0002619!4.04e-09!17;UBERON:0002021!4.18e-09!10;UBERON:0000411!4.18e-09!10;UBERON:0001950!4.18e-09!10;UBERON:0000956!2.35e-08!21;UBERON:0001869!2.35e-08!21;UBERON:0000203!2.35e-08!21;UBERON:0003076!1.10e-07!12;UBERON:0003057!1.10e-07!12
|ontology_enrichment_uberon=UBERON:0002346!9.80e-28!71;UBERON:0003075!9.80e-28!71;UBERON:0007284!9.80e-28!71;UBERON:0004121!2.09e-27!102;UBERON:0000924!2.09e-27!102;UBERON:0006601!2.09e-27!102;UBERON:0000033!5.76e-27!63;UBERON:0000073!7.00e-27!75;UBERON:0001016!7.00e-27!75;UBERON:0001017!3.72e-26!73;UBERON:0005743!3.72e-26!73;UBERON:0001049!7.00e-24!52;UBERON:0005068!7.00e-24!52;UBERON:0006241!7.00e-24!52;UBERON:0007135!7.00e-24!52;UBERON:0000955!5.50e-23!50;UBERON:0006238!5.50e-23!50;UBERON:0002616!2.87e-22!49;UBERON:0003056!2.06e-20!49;UBERON:0003080!7.11e-17!40;UBERON:0002780!3.93e-16!39;UBERON:0001890!3.93e-16!39;UBERON:0006240!3.93e-16!39;UBERON:0002020!1.31e-15!34;UBERON:0007811!4.77e-15!86;UBERON:0002791!1.23e-12!29;UBERON:0003528!1.23e-12!29;UBERON:0001893!1.23e-12!29;UBERON:0000153!1.93e-12!94;UBERON:0002619!4.04e-09!17;UBERON:0002021!4.18e-09!10;UBERON:0000411!4.18e-09!10;UBERON:0001950!4.18e-09!10;UBERON:0000956!2.35e-08!21;UBERON:0001869!2.35e-08!21;UBERON:0000203!2.35e-08!21;UBERON:0003076!1.10e-07!12;UBERON:0003057!1.10e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.41e-42,54;UBERON:0001049,5.56e-38,52;UBERON:0005068,5.56e-38,52;UBERON:0006241,5.56e-38,52;UBERON:0007135,5.56e-38,52;UBERON:0002346,1.93e-33,64;UBERON:0003075,1.93e-33,64;UBERON:0007284,1.93e-33,64;UBERON:0001017,6.81e-33,73;UBERON:0000955,2.37e-32,47;UBERON:0006238,2.37e-32,47;UBERON:0001016,8.60e-32,75;UBERON:0002616,8.85e-31,46;UBERON:0010371,2.59e-28,73;UBERON:0004121,2.03e-26,95;UBERON:0000924,2.03e-26,95;UBERON:0006601,2.03e-26,95;UBERON:0002020,1.92e-25,34;UBERON:0003080,2.71e-25,40;UBERON:0002780,1.16e-23,39;UBERON:0001890,1.16e-23,39;UBERON:0006240,1.16e-23,39;UBERON:0003056,3.20e-23,49;UBERON:0010314,3.40e-22,92;UBERON:0002021,8.28e-21,10;UBERON:0000411,8.28e-21,10;UBERON:0001950,8.28e-21,10;UBERON:0003528,1.92e-20,29;UBERON:0002791,1.92e-20,29;UBERON:0001893,1.92e-20,29;UBERON:0002619,1.61e-16,17;UBERON:0000956,2.20e-15,21;UBERON:0001869,2.20e-15,21;UBERON:0000203,2.20e-15,21;UBERON:0000025,4.53e-14,114;UBERON:0003076,5.74e-13,12;UBERON:0003057,5.74e-13,12;UBERON:0004111,1.27e-12,122;UBERON:0002950,1.26e-08,4;UBERON:0001891,1.26e-08,4;UBERON:0009616,1.26e-08,4;UBERON:0010286,1.26e-08,4;UBERON:0002240,4.16e-08,6;UBERON:0005174,4.16e-08,6;UBERON:0001137,4.16e-08,6;UBERON:0000483,7.87e-08,174;UBERON:0000119,1.20e-07,176;UBERON:0004684,1.66e-07,3;UBERON:0002275,1.66e-07,3;UBERON:0011216,4.38e-07,194;UBERON:0002038,9.37e-07,3;UBERON:0009663,9.37e-07,3;UBERON:0009661,9.37e-07,3;UBERON:0000125,9.37e-07,3;UBERON:0002308,9.37e-07,3
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.872100625521786,0,0,0.139986421625363,0,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,1.14260393761521,1.76694832761291,0.244981598429908,0.287536413054709,0.919218786610021,11.0115880999389,8.55505165170758,9.67721159514334,0.395658863190582,0.365950574409639,0.52091337055676,5.58365998002762,4.50210088025344,7.48711414106369,3.83017161115768,2.98980529678116,0.559198337475902,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0.484875253135222,0,11.7112318804619,13.6140359428746,0.255457055208591,0,0,0,8.38827580667007,12.8100168789215,1.00523481690292,15.1227158567281,11.2514801225345,7.68815764870372,7.62533936418461,0,0,0,0.631325567659422,0,0.459804208866946,0.720248519221397,0.90422890701429,0.612328492361951,1.15302348256365,0.843315521037559,2.32833033665114,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,19.1363853193356,1.74937841044784,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,8.18808008937739,10.7834751664827,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.876767573733936,0,3.53453448063988,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,1.07168517515796,1.41872186913819,0.535106452806212,0.493647061806363,0.304464949114599,0.469343416127421,0.42366414172764,0,0,0,0.120625849856312,0.238744688006273,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,6.21227026878773,8.74617949363636,9.16632821503035,5.15559547031063,7.53590771747707,17.3740596399631,4.72515750162264,11.2580300806055,14.9536994964788,9.31968561153276,0.103787347584177,0.798049746802062,0.682934423016537,0,0.209613162627982,0.551530525350042,0.888986911206461,0.206035057238894,1.28367683836726,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.402048282689293,0,0.579421629724277,1.15745532278223,0.412085900803307,0.883193520806384,0,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.676916863133412,0.365855945745545,0.789209134313529,0.543216455383447,0,0.593175090620871,0.29551344712669,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.872100625521786,0,0,0.139986421625363,0,0,0,0,0.771778308107841,1.14613375975503,0.515672092277442,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0,0,1.14260393761521,1.76694832761291,0.244981598429908,0.287536413054709,0.919218786610021,11.0115880999389,8.55505165170758,9.67721159514334,0.395658863190582,0.365950574409639,0.52091337055676,5.58365998002762,4.50210088025344,7.48711414106369,3.83017161115768,2.98980529678116,0.559198337475902,0.37863096666592,0.302286240427142,0,0,0,0,0,0,0.280888840263504,0,0.259786004602869,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0,0.304465478312141,0,0.60289056221049,0.352766121407114,0,0,0,0,0,0,0.484875253135222,0,11.7112318804619,13.6140359428746,0.255457055208591,0,0,0,8.38827580667007,12.8100168789215,1.00523481690292,15.1227158567281,11.2514801225345,7.68815764870372,7.62533936418461,0,0,0,0.631325567659422,0,0.459804208866946,0.720248519221397,0.90422890701429,0.612328492361951,1.15302348256365,0.843315521037559,2.32833033665114,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,19.1363853193356,1.74937841044784,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,8.18808008937739,10.7834751664827,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.876767573733936,0,3.53453448063988,0,0,0,0,0,0,0.302323556964751,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,1.02131881726136,0.18006109403131,0,1.07168517515796,1.41872186913819,0.535106452806212,0.493647061806363,0.304464949114599,0.469343416127421,0.42366414172764,0,0,0,0.120625849856312,0.238744688006273,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,6.21227026878773,8.74617949363636,9.16632821503035,5.15559547031063,7.53590771747707,17.3740596399631,4.72515750162264,11.2580300806055,14.9536994964788,9.31968561153276,0.103787347584177,0.798049746802062,0.682934423016537,0,0.209613162627982,0.551530525350042,0.888986911206461,0.206035057238894,1.28367683836726,0.252697211763798,0.25347929989024,0.377252682772152,0.280924522409647,0.448176066834085,0.402048282689293,0,0.579421629724277,1.15745532278223,0.412085900803307,0.883193520806384,0,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.676916863133412,0.365855945745545,0.789209134313529,0.543216455383447,0,0.593175090620871,0.29551344712669,0.818462086339379,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.382576664137687,0,0.695603506861264
|short_description=p6@Psd3
|short_description=p6@Psd3
}}
}}

Revision as of 10:11, 14 November 2012

Short description:p6@Psd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Psd3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000093469, ENSMUST00000098696, NM_177698, uc009lwa.2_5end
EntrezGene:Psd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Psd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D79.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.39
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D515.12
cortex, neonate N30.CNhs11107.1392-42F211.25
diencephalon, adult.CNhs10482.20-12F27.69
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E819.14
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C28.19
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron1.66e-073
CNS neuron (sensu Vertebrata)4.54e-0723
neuroblast (sensu Vertebrata)4.54e-0723
neuron of the substantia nigra9.37e-073

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.41e-4254
neural tube5.56e-3852
neural rod5.56e-3852
future spinal cord5.56e-3852
neural keel5.56e-3852
neurectoderm1.93e-3364
neural plate1.93e-3364
presumptive neural plate1.93e-3364
central nervous system6.81e-3373
brain2.37e-3247
future brain2.37e-3247
nervous system8.60e-3275
regional part of brain8.85e-3146
ecto-epithelium2.59e-2873
ectoderm-derived structure2.03e-2695
ectoderm2.03e-2695
presumptive ectoderm2.03e-2695
gray matter1.92e-2534
anterior neural tube2.71e-2540
regional part of forebrain1.16e-2339
forebrain1.16e-2339
future forebrain1.16e-2339
pre-chordal neural plate3.20e-2349
structure with developmental contribution from neural crest3.40e-2292
occipital lobe8.28e-2110
visual cortex8.28e-2110
neocortex8.28e-2110
brain grey matter1.92e-2029
regional part of telencephalon1.92e-2029
telencephalon1.92e-2029
regional part of cerebral cortex1.61e-1617
cerebral cortex2.20e-1521
cerebral hemisphere2.20e-1521
pallium2.20e-1521
tube4.53e-14114
posterior neural tube5.74e-1312
chordal neural plate5.74e-1312
anatomical conduit1.27e-12122
regional part of midbrain1.26e-084
midbrain1.26e-084
presumptive midbrain1.26e-084
midbrain neural tube1.26e-084
spinal cord4.16e-086
dorsal region element4.16e-086
dorsum4.16e-086
epithelium7.87e-08174
cell layer1.20e-07176
raphe nuclei1.66e-073
reticular formation1.66e-073
organ system subdivision4.38e-07194
substantia nigra9.37e-073
telencephalic nucleus9.37e-073
midbrain nucleus9.37e-073
neural nucleus9.37e-073
nucleus of brain9.37e-073







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