FFCP PHASE1:Mm9::chr6:51473978..51473996,+: Difference between revisions
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|id=chr6:51473978..51473996,+ | |id=chr6:51473978..51473996,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.10e-07!33;CL:0000047!2.10e-07!33;CL:0000031!2.10e-07!33;CL:0000404!2.10e-07!33;CL:0000393!8.33e-07!39;CL:0000211!8.33e-07!39;CL:0000117!9.69e-07!23;CL:0000337!9.69e-07!23 | |ontology_enrichment_celltype=CL:0000540!2.10e-07!33;CL:0000047!2.10e-07!33;CL:0000031!2.10e-07!33;CL:0000404!2.10e-07!33;CL:0000393!8.33e-07!39;CL:0000211!8.33e-07!39;CL:0000117!9.69e-07!23;CL:0000337!9.69e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.02e-07,33;CL:0000047,2.02e-07,33;CL:0000031,2.02e-07,33;CL:0000404,2.02e-07,33;CL:0000393,8.04e-07,39;CL:0000211,8.04e-07,39;CL:0000117,9.37e-07,23;CL:0000337,9.37e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!2.97e-14!63;UBERON:0004121!4.59e-14!102;UBERON:0000924!4.59e-14!102;UBERON:0006601!4.59e-14!102;UBERON:0000073!5.55e-14!75;UBERON:0001016!5.55e-14!75;UBERON:0002346!8.24e-14!71;UBERON:0003075!8.24e-14!71;UBERON:0007284!8.24e-14!71;UBERON:0001017!2.13e-13!73;UBERON:0005743!2.13e-13!73;UBERON:0002020!2.84e-12!34;UBERON:0000955!3.62e-12!50;UBERON:0006238!3.62e-12!50;UBERON:0003056!4.90e-12!49;UBERON:0001049!8.16e-12!52;UBERON:0005068!8.16e-12!52;UBERON:0006241!8.16e-12!52;UBERON:0007135!8.16e-12!52;UBERON:0002616!1.14e-11!49;UBERON:0002791!2.08e-11!29;UBERON:0003528!2.08e-11!29;UBERON:0001893!2.08e-11!29;UBERON:0003080!5.12e-10!40;UBERON:0002780!1.59e-09!39;UBERON:0001890!1.59e-09!39;UBERON:0006240!1.59e-09!39;UBERON:0000956!3.96e-08!21;UBERON:0001869!3.96e-08!21;UBERON:0000203!3.96e-08!21;UBERON:0002021!9.88e-08!10;UBERON:0000411!9.88e-08!10;UBERON:0001950!9.88e-08!10;UBERON:0002619!4.32e-07!17 | |ontology_enrichment_uberon=UBERON:0000033!2.97e-14!63;UBERON:0004121!4.59e-14!102;UBERON:0000924!4.59e-14!102;UBERON:0006601!4.59e-14!102;UBERON:0000073!5.55e-14!75;UBERON:0001016!5.55e-14!75;UBERON:0002346!8.24e-14!71;UBERON:0003075!8.24e-14!71;UBERON:0007284!8.24e-14!71;UBERON:0001017!2.13e-13!73;UBERON:0005743!2.13e-13!73;UBERON:0002020!2.84e-12!34;UBERON:0000955!3.62e-12!50;UBERON:0006238!3.62e-12!50;UBERON:0003056!4.90e-12!49;UBERON:0001049!8.16e-12!52;UBERON:0005068!8.16e-12!52;UBERON:0006241!8.16e-12!52;UBERON:0007135!8.16e-12!52;UBERON:0002616!1.14e-11!49;UBERON:0002791!2.08e-11!29;UBERON:0003528!2.08e-11!29;UBERON:0001893!2.08e-11!29;UBERON:0003080!5.12e-10!40;UBERON:0002780!1.59e-09!39;UBERON:0001890!1.59e-09!39;UBERON:0006240!1.59e-09!39;UBERON:0000956!3.96e-08!21;UBERON:0001869!3.96e-08!21;UBERON:0000203!3.96e-08!21;UBERON:0002021!9.88e-08!10;UBERON:0000411!9.88e-08!10;UBERON:0001950!9.88e-08!10;UBERON:0002619!4.32e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.92e-14,64;UBERON:0003075,1.92e-14,64;UBERON:0007284,1.92e-14,64;UBERON:0004121,2.28e-14,95;UBERON:0000924,2.28e-14,95;UBERON:0006601,2.28e-14,95;UBERON:0001016,4.20e-14,75;UBERON:0001017,1.63e-13,73;UBERON:0000073,9.39e-13,54;UBERON:0002020,2.65e-12,34;UBERON:0003056,4.57e-12,49;UBERON:0001049,7.46e-12,52;UBERON:0005068,7.46e-12,52;UBERON:0006241,7.46e-12,52;UBERON:0007135,7.46e-12,52;UBERON:0003528,1.95e-11,29;UBERON:0002791,1.95e-11,29;UBERON:0001893,1.95e-11,29;UBERON:0010371,5.53e-11,73;UBERON:0000955,8.93e-11,47;UBERON:0006238,8.93e-11,47;UBERON:0010314,1.29e-10,92;UBERON:0002616,2.72e-10,46;UBERON:0003080,4.84e-10,40;UBERON:0002780,1.50e-09,39;UBERON:0001890,1.50e-09,39;UBERON:0006240,1.50e-09,39;UBERON:0000956,3.80e-08,21;UBERON:0001869,3.80e-08,21;UBERON:0000203,3.80e-08,21;UBERON:0002021,9.48e-08,10;UBERON:0000411,9.48e-08,10;UBERON:0001950,9.48e-08,10;UBERON:0002619,4.17e-07,17 | |||
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| ||
|short_description=p3@Snx10 | |short_description=p3@Snx10 | ||
}} | }} |
Revision as of 10:08, 14 November 2012
Short description: | p3@Snx10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Snx10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1379 |
Association with transcript: | 0bp_to_ENSMUST00000155724_5end |
EntrezGene: | Snx10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.02e-07 | 33 |
neuronal stem cell | 2.02e-07 | 33 |
neuroblast | 2.02e-07 | 33 |
electrically signaling cell | 2.02e-07 | 33 |
electrically responsive cell | 8.04e-07 | 39 |
electrically active cell | 8.04e-07 | 39 |
CNS neuron (sensu Vertebrata) | 9.37e-07 | 23 |
neuroblast (sensu Vertebrata) | 9.37e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.92e-14 | 64 |
neural plate | 1.92e-14 | 64 |
presumptive neural plate | 1.92e-14 | 64 |
ectoderm-derived structure | 2.28e-14 | 95 |
ectoderm | 2.28e-14 | 95 |
presumptive ectoderm | 2.28e-14 | 95 |
nervous system | 4.20e-14 | 75 |
central nervous system | 1.63e-13 | 73 |
regional part of nervous system | 9.39e-13 | 54 |
gray matter | 2.65e-12 | 34 |
pre-chordal neural plate | 4.57e-12 | 49 |
neural tube | 7.46e-12 | 52 |
neural rod | 7.46e-12 | 52 |
future spinal cord | 7.46e-12 | 52 |
neural keel | 7.46e-12 | 52 |
brain grey matter | 1.95e-11 | 29 |
regional part of telencephalon | 1.95e-11 | 29 |
telencephalon | 1.95e-11 | 29 |
ecto-epithelium | 5.53e-11 | 73 |
brain | 8.93e-11 | 47 |
future brain | 8.93e-11 | 47 |
structure with developmental contribution from neural crest | 1.29e-10 | 92 |
regional part of brain | 2.72e-10 | 46 |
anterior neural tube | 4.84e-10 | 40 |
regional part of forebrain | 1.50e-09 | 39 |
forebrain | 1.50e-09 | 39 |
future forebrain | 1.50e-09 | 39 |
cerebral cortex | 3.80e-08 | 21 |
cerebral hemisphere | 3.80e-08 | 21 |
pallium | 3.80e-08 | 21 |
occipital lobe | 9.48e-08 | 10 |
visual cortex | 9.48e-08 | 10 |
neocortex | 9.48e-08 | 10 |
regional part of cerebral cortex | 4.17e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.