FFCP PHASE1:Mm9::chr8:63471986..63472044,+: Difference between revisions
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|id=chr8:63471986..63472044,+ | |id=chr8:63471986..63472044,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.40e-11!102;UBERON:0000924!2.40e-11!102;UBERON:0006601!2.40e-11!102;UBERON:0002346!2.32e-10!71;UBERON:0003075!2.32e-10!71;UBERON:0007284!2.32e-10!71;UBERON:0001017!6.88e-10!73;UBERON:0005743!6.88e-10!73;UBERON:0000073!3.22e-09!75;UBERON:0001016!3.22e-09!75;UBERON:0000033!3.27e-09!63;UBERON:0002021!1.68e-07!10;UBERON:0000411!1.68e-07!10;UBERON:0001950!1.68e-07!10;UBERON:0000955!2.55e-07!50;UBERON:0006238!2.55e-07!50;UBERON:0002616!7.59e-07!49;UBERON:0001049!7.83e-07!52;UBERON:0005068!7.83e-07!52;UBERON:0006241!7.83e-07!52;UBERON:0007135!7.83e-07!52 | |ontology_enrichment_uberon=UBERON:0004121!2.40e-11!102;UBERON:0000924!2.40e-11!102;UBERON:0006601!2.40e-11!102;UBERON:0002346!2.32e-10!71;UBERON:0003075!2.32e-10!71;UBERON:0007284!2.32e-10!71;UBERON:0001017!6.88e-10!73;UBERON:0005743!6.88e-10!73;UBERON:0000073!3.22e-09!75;UBERON:0001016!3.22e-09!75;UBERON:0000033!3.27e-09!63;UBERON:0002021!1.68e-07!10;UBERON:0000411!1.68e-07!10;UBERON:0001950!1.68e-07!10;UBERON:0000955!2.55e-07!50;UBERON:0006238!2.55e-07!50;UBERON:0002616!7.59e-07!49;UBERON:0001049!7.83e-07!52;UBERON:0005068!7.83e-07!52;UBERON:0006241!7.83e-07!52;UBERON:0007135!7.83e-07!52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.57e-10,95;UBERON:0000924,4.57e-10,95;UBERON:0006601,4.57e-10,95;UBERON:0001017,6.88e-10,73;UBERON:0010371,1.66e-09,73;UBERON:0001016,3.22e-09,75;UBERON:0002346,3.62e-09,64;UBERON:0003075,3.62e-09,64;UBERON:0007284,3.62e-09,64;UBERON:0010314,7.35e-09,92;UBERON:0000073,1.39e-07,54;UBERON:0002021,1.68e-07,10;UBERON:0000411,1.68e-07,10;UBERON:0001950,1.68e-07,10;UBERON:0001049,7.83e-07,52;UBERON:0005068,7.83e-07,52;UBERON:0006241,7.83e-07,52;UBERON:0007135,7.83e-07,52 | |||
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| ||
|short_description=p1@Nek1 | |short_description=p1@Nek1 | ||
}} | }} |
Revision as of 07:33, 14 November 2012
Short description: | p1@Nek1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nek1_5end |
Coexpression cluster: | MCL_coexpression_mm9:933 |
Association with transcript: | 0bp_to_ENSMUST00000034065, ENSMUST00000120689, ENSMUST00000125717, ENSMUST00000140444, ENSMUST00000154313, ENSMUST00000155664, NM_175089, uc009ltr.1, uc009lts.1, uc009ltt.1, uc009ltu.1, uc009ltv.1, uc012ged.1, uc012gee.1, uc012gef.1_5end |
EntrezGene: | Nek1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 4.57e-10 | 95 |
ectoderm | 4.57e-10 | 95 |
presumptive ectoderm | 4.57e-10 | 95 |
central nervous system | 6.88e-10 | 73 |
ecto-epithelium | 1.66e-09 | 73 |
nervous system | 3.22e-09 | 75 |
neurectoderm | 3.62e-09 | 64 |
neural plate | 3.62e-09 | 64 |
presumptive neural plate | 3.62e-09 | 64 |
structure with developmental contribution from neural crest | 7.35e-09 | 92 |
regional part of nervous system | 1.39e-07 | 54 |
occipital lobe | 1.68e-07 | 10 |
visual cortex | 1.68e-07 | 10 |
neocortex | 1.68e-07 | 10 |
neural tube | 7.83e-07 | 52 |
neural rod | 7.83e-07 | 52 |
future spinal cord | 7.83e-07 | 52 |
neural keel | 7.83e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.