FFCP PHASE1:Mm9::chr4:58219558..58219569,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:58219558..58219569,- | |id=chr4:58219558..58219569,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.16e-23,6;CL:0000187,3.16e-23,6;CL:0000056,3.16e-23,6;CL:0000222,7.74e-20,7;CL:0000355,2.60e-15,9;CL:0000192,4.72e-13,3;CL:0000359,4.72e-13,3;CL:0002539,4.72e-13,3;CL:0000514,4.72e-13,3;CL:0002494,7.77e-12,3;CL:0000737,7.77e-12,3;CL:0000746,7.77e-12,3;CL:0000513,7.77e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.20e-10!14;UBERON:0000117!2.20e-10!14;UBERON:0000171!2.20e-10!14;UBERON:0000170!2.20e-10!14;UBERON:0005597!2.20e-10!14;UBERON:0000118!2.20e-10!14;UBERON:0005153!7.92e-09!17;UBERON:0005178!1.66e-07!17;UBERON:0005181!1.66e-07!17;UBERON:0002224!1.66e-07!17;UBERON:0000915!1.66e-07!17;UBERON:0008947!1.66e-07!17;UBERON:0003258!1.66e-07!17;UBERON:0005157!8.41e-07!27 | |ontology_enrichment_uberon=UBERON:0002048!2.20e-10!14;UBERON:0000117!2.20e-10!14;UBERON:0000171!2.20e-10!14;UBERON:0000170!2.20e-10!14;UBERON:0005597!2.20e-10!14;UBERON:0000118!2.20e-10!14;UBERON:0005153!7.92e-09!17;UBERON:0005178!1.66e-07!17;UBERON:0005181!1.66e-07!17;UBERON:0002224!1.66e-07!17;UBERON:0000915!1.66e-07!17;UBERON:0008947!1.66e-07!17;UBERON:0003258!1.66e-07!17;UBERON:0005157!8.41e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.81e-16,14;UBERON:0000117,4.81e-16,14;UBERON:0000171,4.81e-16,14;UBERON:0000170,4.81e-16,14;UBERON:0005597,4.81e-16,14;UBERON:0000118,4.81e-16,14;UBERON:0001134,2.60e-15,9;UBERON:0002036,2.60e-15,9;UBERON:0002385,2.60e-15,9;UBERON:0000486,2.60e-15,9;UBERON:0007503,2.60e-15,9;UBERON:0001015,2.60e-15,9;UBERON:0002329,2.60e-15,9;UBERON:0003082,2.60e-15,9;UBERON:0003059,2.60e-15,9;UBERON:0007282,2.60e-15,9;UBERON:0004290,2.60e-15,9;UBERON:0009618,2.60e-15,9;UBERON:0000383,1.00e-13,10;UBERON:0001135,4.72e-13,3;UBERON:0004237,4.72e-13,3;UBERON:0004695,4.72e-13,3;UBERON:0002111,4.72e-13,3;UBERON:0004178,4.72e-13,3;UBERON:0005153,5.11e-13,17;UBERON:0005178,5.11e-13,17;UBERON:0005181,5.11e-13,17;UBERON:0002224,5.11e-13,17;UBERON:0000915,5.11e-13,17;UBERON:0008947,5.11e-13,17;UBERON:0003258,5.11e-13,17;UBERON:0007524,2.00e-12,11;UBERON:0003077,2.00e-12,11;UBERON:0007285,2.00e-12,11;UBERON:0005157,6.74e-11,20;UBERON:0000947,6.75e-10,4;UBERON:0001637,6.75e-10,4;UBERON:0004573,6.75e-10,4;UBERON:0003509,6.75e-10,4;UBERON:0004571,6.75e-10,4;UBERON:0010191,6.75e-10,4;UBERON:0004572,6.75e-10,4;UBERON:0000055,5.38e-08,5;UBERON:0007500,5.38e-08,5;UBERON:0001981,5.38e-08,5;UBERON:0002049,5.38e-08,5;UBERON:0007798,5.38e-08,5;UBERON:0004537,5.38e-08,5;UBERON:0006965,5.38e-08,5;UBERON:0002100,8.49e-08,90 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4494358919729,9.63080846585388,3.12029478674859,0,0,0,0,0,0,0,0,0,1.28629718017973,2.29226751951005,1.03134418455488,0,0,0,0.677689064138264,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.691846491768175,0,0.352766121407114,0.125666591329675,0.247194967734374,0.86759614151947,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.248813941220186,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.187403449119458,0,0,0.378212160335639,0,1.09597866213787,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.878200461164203,0,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0,0.164698954724011,0.754005626400808,0.397912944082302,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0.37898282354097,1.62964976442026,1.18821560042632,0.234690248288502,1.17254380209271,1.6663054862021,1.56106918286239,0.630540576424764,0.664394068946325,1.11618338060241,0.655453258862952,1.03610989119537,1.3018415272336,0,0,0,0.551873492609465,0,0,5.40985319743029,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.659880491890142,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,1.13025098687134,0.241251699712623,0.119372344003136,0.492422699235184,0.291480836629851,0,0.170870880797853,0.82554747185289,0.925972636848558,0,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,0,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,1.16670713006429,0.774958940866387,0.506868376472335,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,1.68914227906064,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,1.02440163452481,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0.760437899670719,0.565879024158229,0.37456602987953,0.512201219238954,0.229741875822453,0.476293691283074,0.347652977834566,0,0,0.588795680537589,0,0.177475806159338,0.476872379894642,0.290692833264657,0.846984423737976,0,0,0,0,0,0.237270036248348,0,0,0.309873682371932,0.771626443924566,1.24905288968973,1.40358965067245,0.644613162144895,0.57386499620653,0,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4494358919729,9.63080846585388,3.12029478674859,0,0,0,0,0,0,0,0,0,1.28629718017973,2.29226751951005,1.03134418455488,0,0,0,0.677689064138264,0,0,0,0,0.599200221036809,0,0.103689612308478,0,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.691846491768175,0,0.352766121407114,0.125666591329675,0.247194967734374,0.86759614151947,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.01839363850316,0.248813941220186,0,0,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.408218994907967,0.12811372028485,0.187403449119458,0,0,0.378212160335639,0,1.09597866213787,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0,0,0.234526059981096,0,0.473489471170421,0.196764231747404,0.308534225774757,0,0.268273401399619,0.116765342367169,0.16455984991348,0.164167464079095,0.0810688095458557,0.146199987425332,0.878200461164203,0,0,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0.403367049246685,0.667134131534611,0.380451252225118,0,0.164698954724011,0.754005626400808,0.397912944082302,0.38992817423824,0,0,0.398282546508734,0,0.114248512609729,1.1270773567308,0,0,0.0701358198903186,0.442655759869801,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0.37898282354097,1.62964976442026,1.18821560042632,0.234690248288502,1.17254380209271,1.6663054862021,1.56106918286239,0.630540576424764,0.664394068946325,1.11618338060241,0.655453258862952,1.03610989119537,1.3018415272336,0,0,0,0.551873492609465,0,0,5.40985319743029,0.252470927204373,0,0.390438744296638,0,0,0,0,0,0,0,0,0.141940085208269,0,0.488660878060728,0.659880491890142,0,0.242780636154981,0.302323556964751,0,0.590603785761546,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0,0.428674070063185,0.354680467284547,0.178368817602071,0.329098041204242,0,0.23467170806371,0,0,0.32977250588296,1.13025098687134,0.241251699712623,0.119372344003136,0.492422699235184,0.291480836629851,0,0.170870880797853,0.82554747185289,0.925972636848558,0,0.136694227721025,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.648032044930808,0.209088296014469,0,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,1.16670713006429,0.774958940866387,0.506868376472335,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.906921534460845,0,0,0,0,1.68914227906064,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,1.02440163452481,0.243106717068294,0.419226325255965,0.183843508450014,0,0,0.320919209591815,0,0.760437899670719,0.565879024158229,0.37456602987953,0.512201219238954,0.229741875822453,0.476293691283074,0.347652977834566,0,0,0.588795680537589,0,0.177475806159338,0.476872379894642,0.290692833264657,0.846984423737976,0,0,0,0,0,0.237270036248348,0,0,0.309873682371932,0.771626443924566,1.24905288968973,1.40358965067245,0.644613162144895,0.57386499620653,0,0.463735671240843 | ||
|short_description=p6@Svep1 | |short_description=p6@Svep1 | ||
}} | }} |
Revision as of 06:59, 14 November 2012
Short description: | p6@Svep1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Svep1_5end |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | 0bp_to_ENSMUST00000146329_5end |
EntrezGene: | Svep1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.16e-23 | 6 |
muscle cell | 3.16e-23 | 6 |
myoblast | 3.16e-23 | 6 |
mesodermal cell | 7.74e-20 | 7 |
multi-potent skeletal muscle stem cell | 2.60e-15 | 9 |
smooth muscle cell | 4.72e-13 | 3 |
vascular associated smooth muscle cell | 4.72e-13 | 3 |
aortic smooth muscle cell | 4.72e-13 | 3 |
smooth muscle myoblast | 4.72e-13 | 3 |
cardiocyte | 7.77e-12 | 3 |
striated muscle cell | 7.77e-12 | 3 |
cardiac muscle cell | 7.77e-12 | 3 |
cardiac muscle myoblast | 7.77e-12 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.