FFCP PHASE1:Mm9::chr7:29594078..29594100,-: Difference between revisions
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|id=chr7:29594078..29594100,- | |id=chr7:29594078..29594100,- | ||
|ontology_enrichment_celltype=CL:0000144!6.54e-15!121;CL:0000012!6.54e-15!121;CL:0000063!6.91e-14!66;CL:0002371!2.08e-13!118;CL:0000548!6.27e-12!115;CL:0000004!6.27e-12!115;CL:0000255!6.27e-12!115;CL:0000034!1.88e-11!97;CL:0000723!8.61e-10!91;CL:0000048!8.61e-10!91;CL:0002320!5.43e-09!46;CL:0000134!5.43e-09!46;CL:0000988!5.91e-09!32;CL:0002032!5.91e-09!32;CL:0000037!5.91e-09!32;CL:0000566!5.91e-09!32;CL:0000837!5.91e-09!32;CL:0000219!1.09e-08!54;CL:0002031!1.02e-07!25;CL:0000838!4.36e-07!12 | |ontology_enrichment_celltype=CL:0000144!6.54e-15!121;CL:0000012!6.54e-15!121;CL:0000063!6.91e-14!66;CL:0002371!2.08e-13!118;CL:0000548!6.27e-12!115;CL:0000004!6.27e-12!115;CL:0000255!6.27e-12!115;CL:0000034!1.88e-11!97;CL:0000723!8.61e-10!91;CL:0000048!8.61e-10!91;CL:0002320!5.43e-09!46;CL:0000134!5.43e-09!46;CL:0000988!5.91e-09!32;CL:0002032!5.91e-09!32;CL:0000037!5.91e-09!32;CL:0000566!5.91e-09!32;CL:0000837!5.91e-09!32;CL:0000219!1.09e-08!54;CL:0002031!1.02e-07!25;CL:0000838!4.36e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.21e-20,32;CL:0002032,3.21e-20,32;CL:0000037,3.21e-20,32;CL:0000837,3.21e-20,32;CL:0000034,3.70e-20,97;CL:0002320,2.00e-19,46;CL:0000134,2.00e-19,46;CL:0000219,1.32e-17,54;CL:0000723,1.52e-17,91;CL:0000048,1.52e-17,91;CL:0002031,7.07e-17,25;CL:0000738,1.17e-12,17;CL:0002087,1.17e-12,17;CL:0000838,3.28e-12,12;CL:0002563,1.03e-11,9;CL:0002251,1.03e-11,9;CL:0000084,4.50e-11,11;CL:0000827,4.50e-11,11;CL:0000542,4.95e-11,13;CL:0000051,4.95e-11,13;CL:0000066,4.98e-11,25;CL:0000049,2.02e-10,19;CL:0000791,1.13e-09,9;CL:0000789,1.13e-09,9;CL:0002420,1.13e-09,9;CL:0002419,1.13e-09,9;CL:0000790,1.13e-09,9;CL:0000075,6.63e-09,7;CL:0000624,2.50e-08,8;CL:0000239,6.14e-08,6;CL:0000677,6.14e-08,6;CL:0000584,6.14e-08,6;CL:0000763,9.22e-08,16;CL:0002076,2.98e-07,15;CL:0000223,4.03e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.38e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.43e-09!46;UBERON:0000485!1.96e-07!11 | |ontology_enrichment_uberon=UBERON:0002384!5.43e-09!46;UBERON:0000485!1.96e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.00e-19,46;UBERON:0000485,1.66e-13,11;UBERON:0003350,1.03e-11,9;UBERON:0004808,1.03e-11,9;UBERON:0001277,1.03e-11,9;UBERON:0001242,2.15e-07,13;UBERON:0001262,2.15e-07,13;UBERON:0004786,2.15e-07,13 | |||
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|phase1_expression=1.44133962394315,2.79180326111489,1.81999695755814,3.32710632437513,4.00716583957078,2.85394762250213,2.33612640595526,10.5881125222093,3.51971805379167,4.68129052643987,1.02730780935303,0.398860794976682,10.4432445258036,6.29426897416781,0,0.202475267389826,0,1.26184866143295,1.09691546884591,1.69755860719212,0.340173160604279,1.09220046320974,1.30599894569468,0,0.22940928106717,4.01962374880514,1.29228598847722,1.29282739611533,0,0,0.443461021310609,10.7955214488137,4.92051830067656,15.8481681015439,8.37669697278696,3.98963148860382,10.2084678131185,4.18531630736908,12.5013655123808,2.61761871986899,12.3528612486513,8.19654581950135,1.45653105909346,0.377690453926732,0.506884656097573,0.183546752161682,0,0.872100625521786,1.31811709640683,0.972149495371417,0.699932108126813,1.43752564364972,3.35565212115473,15.2326049822382,12.7715643674136,0,0.85960031981627,0.515672092277442,0,0.528990979272033,0.633831403506179,1.0165335962074,0,1.3498495759221,0,1.4209602298922,1.19840044207362,2.68952813725088,0.207379224616955,0.135005938331691,0,0.571301968807607,0.441737081903227,0.122490799214954,0.287536413054709,0.919218786610021,0,0,0.307213066512487,0.263772575460388,0.274462930807229,0.52091337055676,0.558365998002762,0,0.30559649555362,0.589257170947335,0.284743361598206,0.372798891650601,0.075726193333184,0,6.37701875143691,0.860423876981386,0,1.07940638327563,0,0.448026887097336,0.280888840263504,0.852151612890289,0.779358013808606,2.12003744706204,1.97180787687353,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0.11418387971906,0,0.148442139064825,0.346970653532272,0.608930956624282,0.691846491768175,0,0.117588707135705,0.753999547978053,0.247194967734374,0.144599356919912,0,0.485300549842228,0.883366073841574,0.484875253135222,0,0.585561594023094,0.628340120440365,0,2.15667224110656,2.39961092397363,1.77898317902291,0.149790639404823,0,0.251308704225729,0.347648640384553,0.511430914660661,0.62336413367868,0,0.509196819251581,0.373220911830279,0,1.05220927943237,0.520481771850815,0.919608417733892,1.62055916824814,0.60281927134286,0.340182495756639,0.12811372028485,0.374806898238915,1.55222022443409,0,0.189106080167819,0.703804496655795,0.43839146485515,0.278047249225598,0.696504333044333,0.61734640922383,0.199034266818493,2.80885274925294,3.3455227924913,0.284163499395593,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.308534225774757,0.930135779001631,0,0.233530684734339,0.987359099480883,0.656669856316381,0.486412857275134,1.31579988682799,0.878200461164203,1.07365135008297,0.420579897128254,0.102904612379284,0.330418782983798,0.264450566663544,0,0.464473343720877,0.77320476793256,0.403367049246685,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0.758671603812327,0.571242563048644,0,0,0,0.561086559122548,0.379419222745544,0,0.470996183524124,1.23397163921801,0,0.166845105716094,0.393117990226406,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0.162964976442026,0.339490171550376,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0,0.478364305972461,0.983179888294428,0.863424909329478,1.15719246865209,0,1.63171705145613,0,0,0.481651769963376,0.586058432961016,0.163934945376675,0.504941854408746,1.89304931649754,1.95219372148319,1.07711698866399,0.955875191810208,1.55959071857676,1.13230612315533,1.61924280669958,1.16902343164525,0,0.642642632843614,0.283880170416537,0.178065603667255,0.162886959353576,0.494910368917606,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0,0,0,0,0,0,1.02131881726136,0.540183282093931,1.03486947026204,0.857348140126369,0,0.535106452806212,0.164549020602121,0.913394847343798,0.704015124191131,0.21183207086382,0,0.49465875882444,0,0.603129249281559,0.238744688006273,0.164140899745061,0,0.370850604021019,0,0.412773735926445,0,0.376736914009382,0,0,3.0596117398894,4.61839792668071,2.76399947608848,0,0.790839983952838,0.406638934253697,0.648032044930808,0.627264888043406,0.655087691238533,0.404593039154462,0.165306911450672,0,0.129614973291793,0.621339313086926,0,0,0.496375471371293,0.388902376688095,0.774958940866387,0.337912250981556,0.821500670520278,0.651021924219751,0.734015410979976,0,0.288030006257865,0.316011120628178,0,0.308132871494482,0.129920822977795,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.403865799792591,0.304827226619999,0.705783295957884,0,0.288635524920988,0.935015217452552,0.226730383615211,1.10992976687032,0.358855426437903,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0.564751842617067,0.920650473014354,1.14579102687879,1.03111909406213,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.103787347584177,0.798049746802062,0.682934423016537,0.243106717068294,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320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| ||
|short_description=p@chr7:29594078..29594100,- | |short_description=p@chr7:29594078..29594100,- | ||
}} | }} | ||
Revision as of 06:43, 14 November 2012
| Short description: | p@chr7:29594078..29594100, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr7:29594078..29594100, - |
| Coexpression cluster: | MCL_coexpression_mm9:766 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 2.00e-19 | 46 |
| simple columnar epithelium | 1.66e-13 | 11 |
| epithelium of mucosa | 1.03e-11 | 9 |
| gastrointestinal system epithelium | 1.03e-11 | 9 |
| intestinal epithelium | 1.03e-11 | 9 |
| intestinal mucosa | 2.15e-07 | 13 |
| wall of intestine | 2.15e-07 | 13 |
| gastrointestinal system mucosa | 2.15e-07 | 13 |
| Ontology term | p-value | n |
|---|---|---|
| organ system cancer | 3.38e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
