FFCP PHASE1:Mm9::chr18:46795982..46795987,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr18:46795982..46795987,- | |id=chr18:46795982..46795987,- | ||
|ontology_enrichment_celltype=CL:0000181!9.94e-29!5;CL:0000417!9.94e-29!5;CL:0000668!9.94e-29!5;CL:0000412!9.94e-29!5;CL:0000182!9.94e-29!5;CL:0000414!4.83e-13!11;CL:0000066!8.03e-08!25;CL:0000057!3.14e-07!1;CL:0000632!3.14e-07!1;CL:0000223!4.14e-07!20 | |ontology_enrichment_celltype=CL:0000181!9.94e-29!5;CL:0000417!9.94e-29!5;CL:0000668!9.94e-29!5;CL:0000412!9.94e-29!5;CL:0000182!9.94e-29!5;CL:0000414!4.83e-13!11;CL:0000066!8.03e-08!25;CL:0000057!3.14e-07!1;CL:0000632!3.14e-07!1;CL:0000223!4.14e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.33e-47,5;CL:0000057,4.83e-16,1;CL:0000632,4.83e-16,1;CL:0000223,3.14e-12,20;CL:0000066,6.79e-10,25;CL:0002320,2.22e-08,46;CL:0000134,2.22e-08,46;CL:0000219,3.45e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.02e-16!22;UBERON:0007499!8.02e-16!22;UBERON:0006925!8.02e-16!22;UBERON:0009497!8.02e-16!22;UBERON:0000015!8.02e-16!22;UBERON:0002423!8.02e-16!22;UBERON:0006235!8.02e-16!22;UBERON:0008835!8.02e-16!22;UBERON:0003894!8.02e-16!22;UBERON:0004161!8.02e-16!22;UBERON:0008836!8.02e-16!22;UBERON:0009854!4.26e-15!23;UBERON:0009856!4.26e-15!23;UBERON:0002365!8.05e-14!25;UBERON:0002330!8.05e-14!25;UBERON:0003914!4.55e-13!47;UBERON:0005256!4.55e-13!47;UBERON:0005172!2.77e-10!49;UBERON:0005173!2.77e-10!49;UBERON:0002417!2.77e-10!49;UBERON:0000916!2.77e-10!49;UBERON:0009569!2.74e-07!66 | |ontology_enrichment_uberon=UBERON:0002107!8.02e-16!22;UBERON:0007499!8.02e-16!22;UBERON:0006925!8.02e-16!22;UBERON:0009497!8.02e-16!22;UBERON:0000015!8.02e-16!22;UBERON:0002423!8.02e-16!22;UBERON:0006235!8.02e-16!22;UBERON:0008835!8.02e-16!22;UBERON:0003894!8.02e-16!22;UBERON:0004161!8.02e-16!22;UBERON:0008836!8.02e-16!22;UBERON:0009854!4.26e-15!23;UBERON:0009856!4.26e-15!23;UBERON:0002365!8.05e-14!25;UBERON:0002330!8.05e-14!25;UBERON:0003914!4.55e-13!47;UBERON:0005256!4.55e-13!47;UBERON:0005172!2.77e-10!49;UBERON:0005173!2.77e-10!49;UBERON:0002417!2.77e-10!49;UBERON:0000916!2.77e-10!49;UBERON:0009569!2.74e-07!66 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.84e-17,22;UBERON:0007499,4.84e-17,22;UBERON:0006925,4.84e-17,22;UBERON:0009497,4.84e-17,22;UBERON:0000015,4.84e-17,22;UBERON:0002423,4.84e-17,22;UBERON:0006235,4.84e-17,22;UBERON:0008835,4.84e-17,22;UBERON:0003894,4.84e-17,22;UBERON:0004161,4.84e-17,22;UBERON:0008836,4.84e-17,22;UBERON:0009854,2.52e-16,23;UBERON:0009856,2.52e-16,23;UBERON:0002365,4.64e-15,25;UBERON:0002330,4.64e-15,25;UBERON:0005256,1.47e-08,45;UBERON:0002384,2.22e-08,46;UBERON:0003914,3.29e-08,47;UBERON:0005172,6.88e-08,49;UBERON:0005173,6.88e-08,49;UBERON:0002417,6.88e-08,49;UBERON:0000916,6.88e-08,49;UBERON:0003929,4.60e-07,55 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,8.60423876981386,16.9992833426938,1.61910957491345,2.59910566979068,7.16843019355737,0,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0.502666365318702,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,8.60423876981386,16.9992833426938,1.61910957491345,2.59910566979068,7.16843019355737,0,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0.502666365318702,0,0.722996784599558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:46795982..46795987,- | |short_description=p@chr18:46795982..46795987,- | ||
}} | }} |
Revision as of 06:26, 14 November 2012
Short description: | p@chr18:46795982..46795987, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:46795982..46795987, - |
Coexpression cluster: | MCL_coexpression_mm9:277 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.33e-47 | 5 |
fibroblast | 4.83e-16 | 1 |
hepatic stellate cell | 4.83e-16 | 1 |
endodermal cell | 3.14e-12 | 20 |
epithelial cell | 6.79e-10 | 25 |
connective tissue cell | 2.22e-08 | 46 |
mesenchymal cell | 2.22e-08 | 46 |
motile cell | 3.45e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
liver | 4.84e-17 | 22 |
epithelial sac | 4.84e-17 | 22 |
digestive gland | 4.84e-17 | 22 |
epithelium of foregut-midgut junction | 4.84e-17 | 22 |
anatomical boundary | 4.84e-17 | 22 |
hepatobiliary system | 4.84e-17 | 22 |
foregut-midgut junction | 4.84e-17 | 22 |
hepatic diverticulum | 4.84e-17 | 22 |
liver primordium | 4.84e-17 | 22 |
septum transversum | 4.84e-17 | 22 |
liver bud | 4.84e-17 | 22 |
digestive tract diverticulum | 2.52e-16 | 23 |
sac | 2.52e-16 | 23 |
exocrine gland | 4.64e-15 | 25 |
exocrine system | 4.64e-15 | 25 |
trunk mesenchyme | 1.47e-08 | 45 |
connective tissue | 2.22e-08 | 46 |
epithelial tube | 3.29e-08 | 47 |
abdomen element | 6.88e-08 | 49 |
abdominal segment element | 6.88e-08 | 49 |
abdominal segment of trunk | 6.88e-08 | 49 |
abdomen | 6.88e-08 | 49 |
gut epithelium | 4.60e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.