FFCP PHASE1:Mm9::chr3:107698834..107698849,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr3:107698834..107698849,+ | |id=chr3:107698834..107698849,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.07e-12!63;UBERON:0000955!1.02e-11!50;UBERON:0006238!1.02e-11!50;UBERON:0001049!1.12e-11!52;UBERON:0005068!1.12e-11!52;UBERON:0006241!1.12e-11!52;UBERON:0007135!1.12e-11!52;UBERON:0002616!3.04e-11!49;UBERON:0002346!5.08e-11!71;UBERON:0003075!5.08e-11!71;UBERON:0007284!5.08e-11!71;UBERON:0001017!6.93e-10!73;UBERON:0005743!6.93e-10!73;UBERON:0003056!3.01e-09!49;UBERON:0000073!5.99e-09!75;UBERON:0001016!5.99e-09!75;UBERON:0004121!2.20e-08!102;UBERON:0000924!2.20e-08!102;UBERON:0006601!2.20e-08!102;UBERON:0003080!4.77e-08!40;UBERON:0002780!1.36e-07!39;UBERON:0001890!1.36e-07!39;UBERON:0006240!1.36e-07!39;UBERON:0002021!4.40e-07!10;UBERON:0000411!4.40e-07!10;UBERON:0001950!4.40e-07!10 | |ontology_enrichment_uberon=UBERON:0000033!1.07e-12!63;UBERON:0000955!1.02e-11!50;UBERON:0006238!1.02e-11!50;UBERON:0001049!1.12e-11!52;UBERON:0005068!1.12e-11!52;UBERON:0006241!1.12e-11!52;UBERON:0007135!1.12e-11!52;UBERON:0002616!3.04e-11!49;UBERON:0002346!5.08e-11!71;UBERON:0003075!5.08e-11!71;UBERON:0007284!5.08e-11!71;UBERON:0001017!6.93e-10!73;UBERON:0005743!6.93e-10!73;UBERON:0003056!3.01e-09!49;UBERON:0000073!5.99e-09!75;UBERON:0001016!5.99e-09!75;UBERON:0004121!2.20e-08!102;UBERON:0000924!2.20e-08!102;UBERON:0006601!2.20e-08!102;UBERON:0003080!4.77e-08!40;UBERON:0002780!1.36e-07!39;UBERON:0001890!1.36e-07!39;UBERON:0006240!1.36e-07!39;UBERON:0002021!4.40e-07!10;UBERON:0000411!4.40e-07!10;UBERON:0001950!4.40e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.72e-13,54;UBERON:0002346,2.58e-12,64;UBERON:0003075,2.58e-12,64;UBERON:0007284,2.58e-12,64;UBERON:0001049,1.10e-11,52;UBERON:0005068,1.10e-11,52;UBERON:0006241,1.10e-11,52;UBERON:0007135,1.10e-11,52;UBERON:0010371,1.60e-11,73;UBERON:0000955,3.45e-10,47;UBERON:0006238,3.45e-10,47;UBERON:0001017,6.82e-10,73;UBERON:0002616,9.80e-10,46;UBERON:0003056,2.97e-09,49;UBERON:0004121,4.53e-09,95;UBERON:0000924,4.53e-09,95;UBERON:0006601,4.53e-09,95;UBERON:0001016,5.91e-09,75;UBERON:0010314,2.86e-08,92;UBERON:0003080,4.72e-08,40;UBERON:0002780,1.35e-07,39;UBERON:0001890,1.35e-07,39;UBERON:0006240,1.35e-07,39;UBERON:0002021,4.36e-07,10;UBERON:0000411,4.36e-07,10;UBERON:0001950,4.36e-07,10 | |||
|phase1_expression=40.3575094704081,3.48975407639361,9.55498402718026,5.44435580352294,6.01074875935617,5.70789524500425,13.315920513945,0.258246646883153,0.140788722151667,0,0,0,0,0,23.3176833270964,26.9292105628469,34.2785320282792,0.788655413395594,0.411343300817216,1.27316895539409,33.4220130293704,0.0992909512008853,0,10.239515058778,10.0940083669555,9.76194338995534,9.04600191934057,8.40337807474967,6.46079626151671,4.78857246543868,8.20402889424627,6.35030673459631,12.3012957516914,0,31.1959749331377,26.4313086120003,22.8669679013853,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0.485510353031154,90.3939153064645,92.4557612721973,13.9495531642878,10.9534788208725,29.2153709549798,34.7104168720466,47.2464654750509,24.3576373628131,20.125359011096,0,0,0,16.2073444702647,14.3266719969378,13.9231464914909,5.26022798234954,2.64495489636016,1.26766280701236,12.1984031544888,8.89294796111139,3.1496490104849,1.97773272513395,0.7104801149461,7.78960287347852,6.53171119046643,2.90330914463737,3.37514845829227,3.15487442027073,51.1315262082808,50.7997644188711,5.87955836231779,6.3258010872036,5.51531271966013,70.4741638396088,84.5290178123943,81.7186756923215,4.2203612073662,5.85520919055422,5.73004707612436,103.01852663151,118.742910716684,85.7198170027905,24.4541725943144,37.8708670925614,11.7431650869939,2.49896437999507,3.70300644523249,19.4209207430124,4.30211938490693,6.79971333707751,9.71465744948071,4.54843492213368,1.34408066129201,19.9431076587088,9.37366774179318,11.4305842025262,9.89350808628953,23.802537942259,19.2489716121477,12.7402619853323,0,3.030874574157,3.54703811665138,4.54972000513305,27.4041311325744,0.776813650941515,6.08612770165782,15.26670875542,13.3964810457342,12.4532368518272,10.399862198131,9.40709657085639,5.78066320116507,15.5732829672656,6.65157041831594,13.2691582792481,10.676612096529,13.0296495891632,13.5765070877862,5.59175283654366,19.3235326027621,28.6941988334433,5.8755122697976,2.03685711660064,0.599902730993408,1.90605340609597,76.6928073752692,102.937635634191,16.4607201267852,103.773119154789,84.3861009190091,83.9463700020623,80.9583902708111,84.1193145403613,30.4797077994728,86.9366289011841,14.7309299120532,17.0457780281142,20.921091503446,12.4242869565691,18.0845781402858,16.9410882886806,20.7544226861457,22.8632207925738,16.815719098036,7.76044774558232,11.1572587299013,14.2520410572799,13.1517439456545,12.7901734643775,6.96504333044333,12.9642745937004,20.5005294823048,2.1066395619397,1.02939162845886,1.13665399758237,7.04227626620706,11.0227248191115,9.00310307305074,6.15536312521547,8.06733350164356,8.79322543458056,6.27841650826101,7.24338183778972,10.3921154706781,4.77223564749093,6.7308660272429,8.99863785958999,12.1345989563026,10.3188554186794,9.26024289446565,107.458163716269,13.7892180588241,4.62586296177317,6.87571473325215,12.1574302805083,14.1664369834868,12.1135413642768,15.1262643467507,20.6811580775729,24.5391057685201,7.59246498471219,35.4102752656623,28.903549012031,29.4455578620903,24.5654749770091,3.59527763461689,9.29393614461185,11.3510525754989,10.8110703543257,13.2528274627285,11.270773567308,17.3103628668517,24.4380133831208,25.319030980405,28.5829147801643,57.5679577120448,104.404154014514,85.2674402699642,5.03969466048153,14.181833985868,16.5109555895091,23.6105218004096,34.0805003932685,40.0354085189012,54.2353064294424,39.1266746933102,25.9416362840057,16.4736847912849,0,7.07067800570156,6.86482880852033,4.54641980304801,4.4849353380478,1.92977408545347,1.84753190166605,15.3488043534093,9.28900365719548,11.712410918488,9.38760993154008,4.35516269348721,5.95109102215034,7.21994497073856,2.99506773801763,5.75808193086815,3.98636921643718,5.07976275618788,4.14443956478149,2.31438493730419,1.50791283939272,0.54390568381871,3.44234991113325,2.75936746304733,85.0918126935297,86.2678013318615,27.3771358779048,12.6235463602186,11.042787679569,9.37052986311932,10.9865932843727,10.9925647058174,12.4767257486141,6.51076020814315,10.5250782435473,8.47541987942804,5.13874111330481,55.5885877409726,10.3616262202036,14.6013795007149,20.1979829598434,24.7455184458803,3.98235415019888,14.5668381692989,14.2092071773433,16.597247018519,6.79194353625777,10.1453598821496,9.8202751403924,7.63420831902762,9.9819265947722,6.0046984007805,5.27093042874994,8.25084345985495,5.7874732978144,17.2858650270058,19.9212373025442,29.5785108343597,20.9261475697883,36.2088699732203,44.0991375213684,30.1420299623453,3.28540391289194,4.44847348814022,5.29268155331909,23.5787341706316,12.5942252822806,9.52944213864862,10.0272768962635,12.6388492803697,8.74442509889552,78.6203280524561,22.3840853845187,13.2087595496462,27.2235955233476,44.8316927671165,42.7852932766809,23.3353736670653,0.849892149969277,0.839708713941948,1.38199973804424,28.6401185404534,12.4952717464548,9.75933442208874,12.7446302169725,16.936151977172,26.8585953407798,34.2555439817445,23.8041952488967,25.3903263724509,14.1280320888054,3.72803587852155,27.0572610568411,17.6429524331895,20.351394326223,17.5006069509643,42.2352622772181,25.5123749491075,23.8235194450881,33.0719137503633,20.0281347853108,11.1128695579963,14.977560325409,0.632022241256357,10.9471616256689,6.88163413004343,2.20865399062252,1.07416017400489,2.38417625737518,0.721172697119813,1.03382669022204,0.201932899896295,0.457240839929999,0.302478555410522,0,0.577271049841977,0.116876902181569,7.70883304291719,1.10992976687032,1.34570784914214,0.503653849092235,5.79568782096571,37.161130139334,13.1869169472431,4.07299920250225,10.0314420807073,73.4177395402186,77.3346397332057,69.320357126167,90.9103334598107,76.0441596945413,95.1796310711023,77.6275875266577,58.5417564191487,88.3627697519199,57.9891549162038,11.0014588439227,8.37952234142165,15.5367581236262,15.8019366094391,18.4459583112624,13.236732608401,13.7792971237001,12.1560683770948,8.98573786857083,11.8767689528985,9.88569269571935,15.8446126764304,14.8889996877113,13.5733323098323,13.1527223908354,10.9547548995107,10.7772423128716,13.5036454324594,16.071350131329,15.4558866141117,14.7433778525729,16.6827257789777,16.4520971063651,11.9184061638509,13.2694226385616,12.8614203995348,14.8171658026946,17.6256706663355,14.6668442953531,12.906272248128,11.1516917036724,13.0025916735744,20.8707832016542,12.7048209772492,15.4325288784913,9.99242311751784,16.8430758080694,16.1153290536224,9.94699326757986,15.6619907574856,12.5208631235028 | |phase1_expression=40.3575094704081,3.48975407639361,9.55498402718026,5.44435580352294,6.01074875935617,5.70789524500425,13.315920513945,0.258246646883153,0.140788722151667,0,0,0,0,0,23.3176833270964,26.9292105628469,34.2785320282792,0.788655413395594,0.411343300817216,1.27316895539409,33.4220130293704,0.0992909512008853,0,10.239515058778,10.0940083669555,9.76194338995534,9.04600191934057,8.40337807474967,6.46079626151671,4.78857246543868,8.20402889424627,6.35030673459631,12.3012957516914,0,31.1959749331377,26.4313086120003,22.8669679013853,0.418531630736908,0,0.523523743973798,1.17646297606203,0,0.485510353031154,90.3939153064645,92.4557612721973,13.9495531642878,10.9534788208725,29.2153709549798,34.7104168720466,47.2464654750509,24.3576373628131,20.125359011096,0,0,0,16.2073444702647,14.3266719969378,13.9231464914909,5.26022798234954,2.64495489636016,1.26766280701236,12.1984031544888,8.89294796111139,3.1496490104849,1.97773272513395,0.7104801149461,7.78960287347852,6.53171119046643,2.90330914463737,3.37514845829227,3.15487442027073,51.1315262082808,50.7997644188711,5.87955836231779,6.3258010872036,5.51531271966013,70.4741638396088,84.5290178123943,81.7186756923215,4.2203612073662,5.85520919055422,5.73004707612436,103.01852663151,118.742910716684,85.7198170027905,24.4541725943144,37.8708670925614,11.7431650869939,2.49896437999507,3.70300644523249,19.4209207430124,4.30211938490693,6.79971333707751,9.71465744948071,4.54843492213368,1.34408066129201,19.9431076587088,9.37366774179318,11.4305842025262,9.89350808628953,23.802537942259,19.2489716121477,12.7402619853323,0,3.030874574157,3.54703811665138,4.54972000513305,27.4041311325744,0.776813650941515,6.08612770165782,15.26670875542,13.3964810457342,12.4532368518272,10.399862198131,9.40709657085639,5.78066320116507,15.5732829672656,6.65157041831594,13.2691582792481,10.676612096529,13.0296495891632,13.5765070877862,5.59175283654366,19.3235326027621,28.6941988334433,5.8755122697976,2.03685711660064,0.599902730993408,1.90605340609597,76.6928073752692,102.937635634191,16.4607201267852,103.773119154789,84.3861009190091,83.9463700020623,80.9583902708111,84.1193145403613,30.4797077994728,86.9366289011841,14.7309299120532,17.0457780281142,20.921091503446,12.4242869565691,18.0845781402858,16.9410882886806,20.7544226861457,22.8632207925738,16.815719098036,7.76044774558232,11.1572587299013,14.2520410572799,13.1517439456545,12.7901734643775,6.96504333044333,12.9642745937004,20.5005294823048,2.1066395619397,1.02939162845886,1.13665399758237,7.04227626620706,11.0227248191115,9.00310307305074,6.15536312521547,8.06733350164356,8.79322543458056,6.27841650826101,7.24338183778972,10.3921154706781,4.77223564749093,6.7308660272429,8.99863785958999,12.1345989563026,10.3188554186794,9.26024289446565,107.458163716269,13.7892180588241,4.62586296177317,6.87571473325215,12.1574302805083,14.1664369834868,12.1135413642768,15.1262643467507,20.6811580775729,24.5391057685201,7.59246498471219,35.4102752656623,28.903549012031,29.4455578620903,24.5654749770091,3.59527763461689,9.29393614461185,11.3510525754989,10.8110703543257,13.2528274627285,11.270773567308,17.3103628668517,24.4380133831208,25.319030980405,28.5829147801643,57.5679577120448,104.404154014514,85.2674402699642,5.03969466048153,14.181833985868,16.5109555895091,23.6105218004096,34.0805003932685,40.0354085189012,54.2353064294424,39.1266746933102,25.9416362840057,16.4736847912849,0,7.07067800570156,6.86482880852033,4.54641980304801,4.4849353380478,1.92977408545347,1.84753190166605,15.3488043534093,9.28900365719548,11.712410918488,9.38760993154008,4.35516269348721,5.95109102215034,7.21994497073856,2.99506773801763,5.75808193086815,3.98636921643718,5.07976275618788,4.14443956478149,2.31438493730419,1.50791283939272,0.54390568381871,3.44234991113325,2.75936746304733,85.0918126935297,86.2678013318615,27.3771358779048,12.6235463602186,11.042787679569,9.37052986311932,10.9865932843727,10.9925647058174,12.4767257486141,6.51076020814315,10.5250782435473,8.47541987942804,5.13874111330481,55.5885877409726,10.3616262202036,14.6013795007149,20.1979829598434,24.7455184458803,3.98235415019888,14.5668381692989,14.2092071773433,16.597247018519,6.79194353625777,10.1453598821496,9.8202751403924,7.63420831902762,9.9819265947722,6.0046984007805,5.27093042874994,8.25084345985495,5.7874732978144,17.2858650270058,19.9212373025442,29.5785108343597,20.9261475697883,36.2088699732203,44.0991375213684,30.1420299623453,3.28540391289194,4.44847348814022,5.29268155331909,23.5787341706316,12.5942252822806,9.52944213864862,10.0272768962635,12.6388492803697,8.74442509889552,78.6203280524561,22.3840853845187,13.2087595496462,27.2235955233476,44.8316927671165,42.7852932766809,23.3353736670653,0.849892149969277,0.839708713941948,1.38199973804424,28.6401185404534,12.4952717464548,9.75933442208874,12.7446302169725,16.936151977172,26.8585953407798,34.2555439817445,23.8041952488967,25.3903263724509,14.1280320888054,3.72803587852155,27.0572610568411,17.6429524331895,20.351394326223,17.5006069509643,42.2352622772181,25.5123749491075,23.8235194450881,33.0719137503633,20.0281347853108,11.1128695579963,14.977560325409,0.632022241256357,10.9471616256689,6.88163413004343,2.20865399062252,1.07416017400489,2.38417625737518,0.721172697119813,1.03382669022204,0.201932899896295,0.457240839929999,0.302478555410522,0,0.577271049841977,0.116876902181569,7.70883304291719,1.10992976687032,1.34570784914214,0.503653849092235,5.79568782096571,37.161130139334,13.1869169472431,4.07299920250225,10.0314420807073,73.4177395402186,77.3346397332057,69.320357126167,90.9103334598107,76.0441596945413,95.1796310711023,77.6275875266577,58.5417564191487,88.3627697519199,57.9891549162038,11.0014588439227,8.37952234142165,15.5367581236262,15.8019366094391,18.4459583112624,13.236732608401,13.7792971237001,12.1560683770948,8.98573786857083,11.8767689528985,9.88569269571935,15.8446126764304,14.8889996877113,13.5733323098323,13.1527223908354,10.9547548995107,10.7772423128716,13.5036454324594,16.071350131329,15.4558866141117,14.7433778525729,16.6827257789777,16.4520971063651,11.9184061638509,13.2694226385616,12.8614203995348,14.8171658026946,17.6256706663355,14.6668442953531,12.906272248128,11.1516917036724,13.0025916735744,20.8707832016542,12.7048209772492,15.4325288784913,9.99242311751784,16.8430758080694,16.1153290536224,9.94699326757986,15.6619907574856,12.5208631235028 | ||
|short_description=p2@Gstm5 | |short_description=p2@Gstm5 | ||
}} | }} |
Revision as of 06:13, 14 November 2012
Short description: | p2@Gstm5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gstm5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -9bp_to_ENSMUST00000172247_5end |
EntrezGene: | Gstm5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.72e-13 | 54 |
neurectoderm | 2.58e-12 | 64 |
neural plate | 2.58e-12 | 64 |
presumptive neural plate | 2.58e-12 | 64 |
neural tube | 1.10e-11 | 52 |
neural rod | 1.10e-11 | 52 |
future spinal cord | 1.10e-11 | 52 |
neural keel | 1.10e-11 | 52 |
ecto-epithelium | 1.60e-11 | 73 |
brain | 3.45e-10 | 47 |
future brain | 3.45e-10 | 47 |
central nervous system | 6.82e-10 | 73 |
regional part of brain | 9.80e-10 | 46 |
pre-chordal neural plate | 2.97e-09 | 49 |
ectoderm-derived structure | 4.53e-09 | 95 |
ectoderm | 4.53e-09 | 95 |
presumptive ectoderm | 4.53e-09 | 95 |
nervous system | 5.91e-09 | 75 |
structure with developmental contribution from neural crest | 2.86e-08 | 92 |
anterior neural tube | 4.72e-08 | 40 |
regional part of forebrain | 1.35e-07 | 39 |
forebrain | 1.35e-07 | 39 |
future forebrain | 1.35e-07 | 39 |
occipital lobe | 4.36e-07 | 10 |
visual cortex | 4.36e-07 | 10 |
neocortex | 4.36e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.